RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 LAMB1P07942 1786 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 ZNF609O15014 1411 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 UBN2Q6ZU65 1347 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 H7C1W4 665 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 COL9A1P20849 921 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 ANKRD45Q5TZF3 282 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 INTS5Q6P9B9 1019 aaKnown RBP7.29□□□□□ -1.24
SCLT1-207ENST00000506233 KSR2Q6VAB6 950 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 NUDT18Q6ZVK8 323 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 TAS1R3Q7RTX0 852 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 SYNE4Q8N205 404 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 PPP1R18Q6NYC8 613 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 TMC7Q7Z402 723 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 TMEM87AQ8NBN3 555 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 BICC1Q9H694 974 aaKnown RBP7.29□□□□□ -1.24
SCLT1-207ENST00000506233 ASAP1Q9ULH1 1129 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 PA2G4Q9UQ80 394 aaKnown RBP7.29□□□□□ -1.24
SCLT1-207ENST00000506233 A0A0G2JLW4 131 aa7.28□□□□□ -1.24
SCLT1-207ENST00000506233 C21orf2O43822 256 aa7.28□□□□□ -1.24
SCLT1-207ENST00000506233 GCKRQ14397 625 aa7.28□□□□□ -1.24
SCLT1-207ENST00000506233 EVI5LQ96CN4 794 aa7.28□□□□□ -1.24
SCLT1-207ENST00000506233 TTC14Q96N46 770 aa7.28□□□□□ -1.24
SCLT1-207ENST00000506233 RPAP1Q9BWH6 1393 aaPredicted RBP7.28□□□□□ -1.24
SCLT1-207ENST00000506233 SMAPO00193 183 aa7.28□□□□□ -1.24
SCLT1-207ENST00000506233 RPUSD2Q8IZ73 545 aaKnown RBP7.28□□□□□ -1.24
SCLT1-207ENST00000506233 MARCH10Q8NA82 808 aaPredicted RBP7.28□□□□□ -1.24
SCLT1-207ENST00000506233 C1orf216Q8TAB5 229 aa7.28□□□□□ -1.24
SCLT1-207ENST00000506233 DNAAF4Q8WXU2 420 aa7.28□□□□□ -1.24
SCLT1-207ENST00000506233 EAF2Q96CJ1 260 aaPredicted RBP7.28□□□□□ -1.24
SCLT1-207ENST00000506233 LSG1Q9H089 658 aaKnown RBP7.28□□□□□ -1.24
SCLT1-207ENST00000506233 TACC3Q9Y6A5 838 aa7.28□□□□□ -1.24
SCLT1-207ENST00000506233 SIPA1L1O43166 1804 aa7.28□□□□□ -1.24
SCLT1-207ENST00000506233 DUOX1Q9NRD9 1551 aa7.28□□□□□ -1.24
SCLT1-207ENST00000506233 MAST2Q6P0Q8 1798 aa7.28□□□□□ -1.24
SCLT1-207ENST00000506233 ATF3P18847 181 aa7.28□□□□□ -1.24
SCLT1-207ENST00000506233 PLEKHO1Q53GL0 409 aaPredicted RBP7.28□□□□□ -1.24
SCLT1-207ENST00000506233 CHAMP1Q96JM3 812 aa7.28□□□□□ -1.24
SCLT1-207ENST00000506233 ISCA1Q9BUE6 129 aa7.28□□□□□ -1.24
SCLT1-207ENST00000506233 CXXC1Q9P0U4 656 aaPredicted RBP7.28□□□□□ -1.24
SCLT1-207ENST00000506233 CHMLP26374 656 aa7.27□□□□□ -1.25
SCLT1-207ENST00000506233 RGL4Q8IZJ4 473 aa7.27□□□□□ -1.25
SCLT1-207ENST00000506233 WWC3Q9ULE0 1092 aa7.27□□□□□ -1.25
SCLT1-207ENST00000506233 ERVV-2B6SEH9 535 aa7.27□□□□□ -1.25
SCLT1-207ENST00000506233 SLC10A3P09131 477 aa7.27□□□□□ -1.25
SCLT1-207ENST00000506233 NR1H3Q13133 447 aa7.27□□□□□ -1.25
SCLT1-207ENST00000506233 SWI5Q1ZZU3 235 aa7.27□□□□□ -1.25
SCLT1-207ENST00000506233 STAG1Q8WVM7 1258 aa7.27□□□□□ -1.25
SCLT1-207ENST00000506233 METTL22Q9BUU2 404 aaPredicted RBP7.27□□□□□ -1.25
SCLT1-207ENST00000506233 PCDHGB7Q9Y5F8 929 aa7.27□□□□□ -1.25
SCLT1-207ENST00000506233 MYH13Q9UKX3 1938 aa7.27□□□□□ -1.25
SCLT1-207ENST00000506233 SPATA31A5Q5VU36 1347 aa7.27□□□□□ -1.25
SCLT1-207ENST00000506233 SPATA31A7Q8IWB4 1347 aa7.27□□□□□ -1.25
SCLT1-207ENST00000506233 A1BGP04217 495 aa7.26□□□□□ -1.25
SCLT1-207ENST00000506233 HLFQ16534 295 aa7.26□□□□□ -1.25
SCLT1-207ENST00000506233 C22orf23Q9BZE7 217 aa7.26□□□□□ -1.25
SCLT1-207ENST00000506233 GABBR1Q9UBS5 961 aa7.26□□□□□ -1.25
SCLT1-207ENST00000506233 DBF4Q9UBU7 674 aaPredicted RBP7.26□□□□□ -1.25
SCLT1-207ENST00000506233 EGFL7Q9UHF1 273 aa7.26□□□□□ -1.25
SCLT1-207ENST00000506233 WTIPA6NIX2 430 aaPredicted RBP7.26□□□□□ -1.25
SCLT1-207ENST00000506233 FRAT2O75474 233 aaPredicted RBP7.26□□□□□ -1.25
SCLT1-207ENST00000506233 CYP19A1P11511 503 aaPredicted RBP7.26□□□□□ -1.25
SCLT1-207ENST00000506233 ATP2B1P20020 1258 aa7.26□□□□□ -1.25
SCLT1-207ENST00000506233 IFNL2Q8IZJ0 200 aa7.26□□□□□ -1.25
SCLT1-207ENST00000506233 AOX1Q06278 1338 aa7.26□□□□□ -1.25
SCLT1-207ENST00000506233 PCDH11XQ9BZA7 1347 aa7.26□□□□□ -1.25
SCLT1-207ENST00000506233 PCDH11YQ9BZA8 1340 aa7.26□□□□□ -1.25
SCLT1-207ENST00000506233 GNAI2P04899 355 aa7.26□□□□□ -1.25
SCLT1-207ENST00000506233 GCGRP47871 477 aa7.26□□□□□ -1.25
SCLT1-207ENST00000506233 BMS1Q14692 1282 aaKnown RBP7.26□□□□□ -1.25
SCLT1-207ENST00000506233 NFKBIBQ15653 356 aa7.26□□□□□ -1.25
SCLT1-207ENST00000506233 ZNF394Q53GI3 561 aa7.26□□□□□ -1.25
SCLT1-207ENST00000506233 XAGE3Q8WTP9 111 aa7.26□□□□□ -1.25
SCLT1-207ENST00000506233 JARID2Q92833 1246 aaPredicted RBP7.26□□□□□ -1.25
SCLT1-207ENST00000506233 hCG_2014768A0A024R1R8 64 aa7.25□□□□□ -1.25
SCLT1-207ENST00000506233 C6orf229H3BNL8 230 aa7.25□□□□□ -1.25
SCLT1-207ENST00000506233 ITPK1Q13572 414 aa7.25□□□□□ -1.25
SCLT1-207ENST00000506233 CERKQ8TCT0 537 aa7.25□□□□□ -1.25
SCLT1-207ENST00000506233 ATRNO75882 1429 aa7.25□□□□□ -1.25
SCLT1-207ENST00000506233 COPS6Q7L5N1 327 aa7.25□□□□□ -1.25
SCLT1-207ENST00000506233 OCSTAMPQ9BR26 566 aa7.25□□□□□ -1.25
SCLT1-207ENST00000506233 PARP2Q9UGN5 583 aa7.25□□□□□ -1.25
SCLT1-207ENST00000506233 CSF1RP07333 972 aa7.25□□□□□ -1.25
SCLT1-207ENST00000506233 PTH1RQ03431 593 aa7.25□□□□□ -1.25
SCLT1-207ENST00000506233 RHPN1Q8TCX5 695 aa7.25□□□□□ -1.25
SCLT1-207ENST00000506233 ATN1P54259 1190 aaPredicted RBP7.24□□□□□ -1.25
SCLT1-207ENST00000506233 BCL2L12Q9HB09 334 aa7.24□□□□□ -1.25
SCLT1-207ENST00000506233 BTG4Q9NY30 223 aa7.24□□□□□ -1.25
SCLT1-207ENST00000506233 ERBB4Q15303 1308 aa7.24□□□□□ -1.25
SCLT1-207ENST00000506233 ALDH1L1O75891 902 aa7.24□□□□□ -1.25
SCLT1-207ENST00000506233 RACK1P63244 317 aaKnown RBP7.24□□□□□ -1.25
SCLT1-207ENST00000506233 FKBP5Q13451 457 aaPredicted RBP7.24□□□□□ -1.25
SCLT1-207ENST00000506233 ZNF746Q6NUN9 644 aaPredicted RBP7.24□□□□□ -1.25
SCLT1-207ENST00000506233 LINS1Q8NG48 757 aa7.24□□□□□ -1.25
SCLT1-207ENST00000506233 NBPF3Q9H094 633 aa7.24□□□□□ -1.25
SCLT1-207ENST00000506233 LARGE1O95461 756 aa7.24□□□□□ -1.25
SCLT1-207ENST00000506233 PLPP7Q8NBV4 271 aa7.24□□□□□ -1.25
SCLT1-207ENST00000506233 ZCRB1Q8TBF4 217 aaKnown RBP7.24□□□□□ -1.25
SCLT1-207ENST00000506233 ESYT1Q9BSJ8 1104 aa7.24□□□□□ -1.25
SCLT1-207ENST00000506233 TGIF2Q9GZN2 237 aa7.24□□□□□ -1.25
SCLT1-207ENST00000506233 DBNLQ9UJU6 430 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms