RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 ZBED9Q6R2W3 1325 aa20.88■□□□□ 0.93
PDLIM7-215ENST00000506161 PNMA6EA0A0J9YXQ4 647 aa20.88■□□□□ 0.93
PDLIM7-215ENST00000506161 IFIT1P09914 478 aaKnown RBP20.88■□□□□ 0.93
PDLIM7-215ENST00000506161 CRKP46108 304 aa20.88■□□□□ 0.93
PDLIM7-215ENST00000506161 SPDYE2Q495Y8 402 aa20.88■□□□□ 0.93
PDLIM7-215ENST00000506161 NBPF12Q5TAG4 269 aaPredicted RBP20.88■□□□□ 0.93
PDLIM7-215ENST00000506161 VPS37DQ86XT2 251 aa20.88■□□□□ 0.93
PDLIM7-215ENST00000506161 LPIN2Q92539 896 aa20.88■□□□□ 0.93
PDLIM7-215ENST00000506161 CCDC102AQ96A19 550 aa20.88■□□□□ 0.93
PDLIM7-215ENST00000506161 ZNF70Q9UC06 446 aaPredicted RBP20.88■□□□□ 0.93
PDLIM7-215ENST00000506161 MYH2Q9UKX2 1941 aa20.88■□□□□ 0.93
PDLIM7-215ENST00000506161 PHKA1P46020 1223 aa20.87■□□□□ 0.93
PDLIM7-215ENST00000506161 MTX1Q13505 466 aa20.87■□□□□ 0.93
PDLIM7-215ENST00000506161 TTLL12Q14166 644 aaPredicted RBP20.87■□□□□ 0.93
PDLIM7-215ENST00000506161 ATP2B3Q16720 1220 aa20.87■□□□□ 0.93
PDLIM7-215ENST00000506161 CAVIN4Q5BKX8 364 aa20.87■□□□□ 0.93
PDLIM7-215ENST00000506161 DZIP1LQ8IYY4 767 aaKnown RBP20.87■□□□□ 0.93
PDLIM7-215ENST00000506161 SLC5A1P13866 664 aa20.86■□□□□ 0.93
PDLIM7-215ENST00000506161 CACNB3P54284 484 aa20.86■□□□□ 0.93
PDLIM7-215ENST00000506161 MKRN3Q13064 507 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-215ENST00000506161 LDLRAD1Q5T700 205 aa20.86■□□□□ 0.93
PDLIM7-215ENST00000506161 SERPINA10Q9UK55 444 aa20.86■□□□□ 0.93
PDLIM7-215ENST00000506161 ANGEL1Q9UNK9 670 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-215ENST00000506161 MYO5AQ9Y4I1 1855 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-215ENST00000506161 SRGAP3O43295 1099 aa20.85■□□□□ 0.93
PDLIM7-215ENST00000506161 GNAI3P08754 354 aa20.85■□□□□ 0.93
PDLIM7-215ENST00000506161 RASA3Q14644 834 aa20.85■□□□□ 0.93
PDLIM7-215ENST00000506161 ZKSCAN2Q63HK3 967 aa20.85■□□□□ 0.93
PDLIM7-215ENST00000506161 CLMNQ96JQ2 1002 aa20.85■□□□□ 0.93
PDLIM7-215ENST00000506161 TEPSINQ96N21 525 aa20.85■□□□□ 0.93
PDLIM7-215ENST00000506161 RNF186Q9NXI6 227 aa20.85■□□□□ 0.93
PDLIM7-215ENST00000506161 FBXO3Q9UK99 471 aa20.85■□□□□ 0.93
PDLIM7-215ENST00000506161 IPO8O15397 1037 aaKnown RBP20.84■□□□□ 0.93
PDLIM7-215ENST00000506161 TRPA1O75762 1119 aa20.84■□□□□ 0.93
PDLIM7-215ENST00000506161 IL15P40933 162 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-215ENST00000506161 TFCP2Q12800 502 aa20.84■□□□□ 0.93
PDLIM7-215ENST00000506161 C1orf115Q9H7X2 142 aa20.84■□□□□ 0.93
PDLIM7-215ENST00000506161 CEP126Q9P2H0 1117 aa20.84■□□□□ 0.93
PDLIM7-215ENST00000506161 TCP10L2B9ZVM9 353 aa20.83■□□□□ 0.93
PDLIM7-215ENST00000506161 FRAT2O75474 233 aaPredicted RBP20.83■□□□□ 0.93
PDLIM7-215ENST00000506161 PRDX5P30044 214 aa20.83■□□□□ 0.93
PDLIM7-215ENST00000506161 TIMM10P62072 90 aa20.83■□□□□ 0.93
PDLIM7-215ENST00000506161 CTU1Q7Z7A3 348 aaKnown RBP20.83■□□□□ 0.93
PDLIM7-215ENST00000506161 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.83■□□□□ 0.93
PDLIM7-215ENST00000506161 USP2O75604 605 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-215ENST00000506161 NF2P35240 595 aa20.82■□□□□ 0.92
PDLIM7-215ENST00000506161 MAP3K11Q16584 847 aa20.82■□□□□ 0.92
PDLIM7-215ENST00000506161 APOBEC3HQ6NTF7 200 aaKnown RBP20.82■□□□□ 0.92
PDLIM7-215ENST00000506161 TMEM39BQ9GZU3 492 aa20.82■□□□□ 0.92
PDLIM7-215ENST00000506161 MYO1BO43795 1136 aa20.81■□□□□ 0.92
PDLIM7-215ENST00000506161 GNAI2P04899 355 aa20.81■□□□□ 0.92
PDLIM7-215ENST00000506161 GJA5P36382 358 aa20.81■□□□□ 0.92
PDLIM7-215ENST00000506161 DIXDC1Q155Q3 683 aa20.81■□□□□ 0.92
PDLIM7-215ENST00000506161 TBC1D22AQ8WUA7 517 aa20.81■□□□□ 0.92
PDLIM7-215ENST00000506161 PPP2R3BQ9Y5P8 575 aa20.81■□□□□ 0.92
PDLIM7-215ENST00000506161 CCDC102BQ68D86 513 aa20.8■□□□□ 0.92
PDLIM7-215ENST00000506161 ARMC9Q7Z3E5 817 aa20.8■□□□□ 0.92
PDLIM7-215ENST00000506161 AK9Q5TCS8 1911 aa20.8■□□□□ 0.92
PDLIM7-215ENST00000506161 A0A1B0GUL7 405 aa20.79■□□□□ 0.92
PDLIM7-215ENST00000506161 HDLBPQ00341 1268 aaKnown RBP20.79■□□□□ 0.92
PDLIM7-215ENST00000506161 SPRYD7Q5W111 196 aa20.79■□□□□ 0.92
PDLIM7-215ENST00000506161 TEKT1Q969V4 418 aa20.79■□□□□ 0.92
PDLIM7-215ENST00000506161 ZDHHC15Q96MV8 337 aa20.79■□□□□ 0.92
PDLIM7-215ENST00000506161 RASGRF1Q13972 1273 aa20.78■□□□□ 0.92
PDLIM7-215ENST00000506161 POLA2Q14181 598 aa20.78■□□□□ 0.92
PDLIM7-215ENST00000506161 PANK1Q8TE04 598 aa20.78■□□□□ 0.92
PDLIM7-215ENST00000506161 XAGE2Q96GT9 111 aa20.78■□□□□ 0.92
PDLIM7-215ENST00000506161 R3HDMLQ9H3Y0 253 aa20.78■□□□□ 0.92
PDLIM7-215ENST00000506161 HPS5Q9UPZ3 1129 aa20.78■□□□□ 0.92
PDLIM7-215ENST00000506161 DAGLAQ9Y4D2 1042 aa20.78■□□□□ 0.92
PDLIM7-215ENST00000506161 DOCK2Q92608 1830 aa20.77■□□□□ 0.92
PDLIM7-215ENST00000506161 ZBTB7BO15156 539 aaPredicted RBP20.77■□□□□ 0.92
PDLIM7-215ENST00000506161 PI16Q6UXB8 463 aa20.77■□□□□ 0.92
PDLIM7-215ENST00000506161 WDR66Q8TBY9 1149 aa20.77■□□□□ 0.92
PDLIM7-215ENST00000506161 HDAC5Q9UQL6 1122 aa20.77■□□□□ 0.92
PDLIM7-215ENST00000506161 HHIPL2Q6UWX4 724 aa20.76■□□□□ 0.91
PDLIM7-215ENST00000506161 ZNF384Q8TF68 577 aa20.76■□□□□ 0.91
PDLIM7-215ENST00000506161 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
PDLIM7-215ENST00000506161 GCC1Q96CN9 775 aa20.76■□□□□ 0.91
PDLIM7-215ENST00000506161 WNK4Q96J92 1243 aa20.76■□□□□ 0.91
PDLIM7-215ENST00000506161 MRIQ9BWK5 157 aa20.76■□□□□ 0.91
PDLIM7-215ENST00000506161 CDK5RAP2Q96SN8 1893 aa20.75■□□□□ 0.91
PDLIM7-215ENST00000506161 TBC1D8O95759 1140 aa20.75■□□□□ 0.91
PDLIM7-215ENST00000506161 TM4SF4P48230 202 aa20.75■□□□□ 0.91
PDLIM7-215ENST00000506161 PKN2Q16513 984 aaKnown RBP20.75■□□□□ 0.91
PDLIM7-215ENST00000506161 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.75■□□□□ 0.91
PDLIM7-215ENST00000506161 ITPRIPQ8IWB1 547 aa20.75■□□□□ 0.91
PDLIM7-215ENST00000506161 SUGT1Q9Y2Z0 365 aa20.75■□□□□ 0.91
PDLIM7-215ENST00000506161 SALL1Q9NSC2 1324 aa20.75■□□□□ 0.91
PDLIM7-215ENST00000506161 ATP8B2P98198 1209 aa20.74■□□□□ 0.91
PDLIM7-215ENST00000506161 NFIAQ12857 509 aa20.74■□□□□ 0.91
PDLIM7-215ENST00000506161 SUPT20HL1Q3ZLR7 823 aa20.74■□□□□ 0.91
PDLIM7-215ENST00000506161 REM2Q8IYK8 340 aaPredicted RBP20.74■□□□□ 0.91
PDLIM7-215ENST00000506161 SSH3Q8TE77 659 aa20.74■□□□□ 0.91
PDLIM7-215ENST00000506161 DENND2AQ9ULE3 1009 aa20.74■□□□□ 0.91
PDLIM7-215ENST00000506161 PPP1R12BO60237 982 aaPredicted RBP20.73■□□□□ 0.91
PDLIM7-215ENST00000506161 TNFAIP1Q13829 316 aa20.73■□□□□ 0.91
PDLIM7-215ENST00000506161 CDC42EP5Q6NZY7 148 aa20.73■□□□□ 0.91
PDLIM7-215ENST00000506161 SLC10A4Q96EP9 437 aa20.73■□□□□ 0.91
PDLIM7-215ENST00000506161 MAST3O60307 1309 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms