RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 ZDHHC15Q96MV8 337 aa13.15□□□□□ -0.3
UBE2D3-212ENST00000502563 DBNDD2Q9BQY9 259 aa13.15□□□□□ -0.3
UBE2D3-212ENST00000502563 AKAP11Q9UKA4 1901 aa13.15□□□□□ -0.3
UBE2D3-212ENST00000502563 SHTN1A0MZ66 631 aa13.14□□□□□ -0.31
UBE2D3-212ENST00000502563 MAP4K4O95819 1239 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-212ENST00000502563 MCAMP43121 646 aa13.14□□□□□ -0.31
UBE2D3-212ENST00000502563 TBC1D10BQ4KMP7 808 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-212ENST00000502563 FKBP1CQ5VVH2 108 aa13.14□□□□□ -0.31
UBE2D3-212ENST00000502563 AACSQ86V21 672 aa13.14□□□□□ -0.31
UBE2D3-212ENST00000502563 SLF2Q8IX21 1173 aa13.14□□□□□ -0.31
UBE2D3-212ENST00000502563 SMC5Q8IY18 1101 aa13.14□□□□□ -0.31
UBE2D3-212ENST00000502563 FBXW7Q969H0 707 aa13.14□□□□□ -0.31
UBE2D3-212ENST00000502563 TEKT1Q969V4 418 aa13.14□□□□□ -0.31
UBE2D3-212ENST00000502563 MXD3Q9BW11 206 aa13.14□□□□□ -0.31
UBE2D3-212ENST00000502563 HMG20BQ9P0W2 317 aa13.14□□□□□ -0.31
UBE2D3-212ENST00000502563 TTF2Q9UNY4 1162 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-212ENST00000502563 PPP2R3BQ9Y5P8 575 aa13.14□□□□□ -0.31
UBE2D3-212ENST00000502563 MYO1BO43795 1136 aa13.13□□□□□ -0.31
UBE2D3-212ENST00000502563 LDHBP07195 334 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-212ENST00000502563 IFIT2P09913 472 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-212ENST00000502563 APLP1P51693 650 aa13.13□□□□□ -0.31
UBE2D3-212ENST00000502563 SCARF1Q14162 830 aa13.13□□□□□ -0.31
UBE2D3-212ENST00000502563 DLGAP5Q15398 846 aa13.13□□□□□ -0.31
UBE2D3-212ENST00000502563 TTC39AQ5SRH9 613 aa13.13□□□□□ -0.31
UBE2D3-212ENST00000502563 APOBEC3FQ8IUX4 373 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-212ENST00000502563 DCPSQ96C86 337 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-212ENST00000502563 RWDD1Q9H446 243 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-212ENST00000502563 IQSEC3Q9UPP2 1182 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-212ENST00000502563 GAKO14976 1311 aa13.13□□□□□ -0.31
UBE2D3-212ENST00000502563 CRKP46108 304 aa13.12□□□□□ -0.31
UBE2D3-212ENST00000502563 CHAF1AQ13111 956 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-212ENST00000502563 CFAP100Q494V2 611 aa13.12□□□□□ -0.31
UBE2D3-212ENST00000502563 MAP1SQ66K74 1059 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-212ENST00000502563 SULF1Q8IWU6 871 aa13.12□□□□□ -0.31
UBE2D3-212ENST00000502563 EXOC6Q8TAG9 804 aa13.12□□□□□ -0.31
UBE2D3-212ENST00000502563 CREBZFQ9NS37 354 aa13.12□□□□□ -0.31
UBE2D3-212ENST00000502563 GGA3Q9NZ52 723 aa13.12□□□□□ -0.31
UBE2D3-212ENST00000502563 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
UBE2D3-212ENST00000502563 ATP5JP18859 108 aa13.11□□□□□ -0.31
UBE2D3-212ENST00000502563 PRDX5P30044 214 aa13.11□□□□□ -0.31
UBE2D3-212ENST00000502563 TNFAIP1Q13829 316 aa13.11□□□□□ -0.31
UBE2D3-212ENST00000502563 TTF1Q15361 905 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-212ENST00000502563 NBPF9Q3BBW0 867 aa13.11□□□□□ -0.31
UBE2D3-212ENST00000502563 SPDYE2Q495Y8 402 aa13.11□□□□□ -0.31
UBE2D3-212ENST00000502563 CERS3Q8IU89 383 aa13.11□□□□□ -0.31
UBE2D3-212ENST00000502563 HHIPL1Q96JK4 782 aa13.11□□□□□ -0.31
UBE2D3-212ENST00000502563 CCDC8Q9H0W5 538 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-212ENST00000502563 IL1RAPL2Q9NP60 686 aa13.11□□□□□ -0.31
UBE2D3-212ENST00000502563 TLR7Q9NYK1 1049 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-212ENST00000502563 MAST2Q6P0Q8 1798 aa13.11□□□□□ -0.31
UBE2D3-212ENST00000502563 TTC41PQ6P2S7 1318 aa13.11□□□□□ -0.31
UBE2D3-212ENST00000502563 TRPM7Q96QT4 1865 aa13.1□□□□□ -0.31
UBE2D3-212ENST00000502563 RPAP1Q9BWH6 1393 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-212ENST00000502563 FKBP1BP68106 108 aa13.1□□□□□ -0.31
UBE2D3-212ENST00000502563 GSTO1P78417 241 aa13.1□□□□□ -0.31
UBE2D3-212ENST00000502563 GRIK5Q16478 980 aa13.1□□□□□ -0.31
UBE2D3-212ENST00000502563 ANGEL2Q5VTE6 544 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-212ENST00000502563 APOBEC3HQ6NTF7 200 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-212ENST00000502563 ERICH6Q7L0X2 663 aa13.1□□□□□ -0.31
UBE2D3-212ENST00000502563 KRT26Q7Z3Y9 468 aa13.1□□□□□ -0.31
UBE2D3-212ENST00000502563 TICAM2Q86XR7 235 aa13.1□□□□□ -0.31
UBE2D3-212ENST00000502563 PRMT6Q96LA8 375 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-212ENST00000502563 DOCK2Q92608 1830 aa13.09□□□□□ -0.31
UBE2D3-212ENST00000502563 UNCXA6NJT0 531 aa13.09□□□□□ -0.31
UBE2D3-212ENST00000502563 PITPNM1O00562 1244 aa13.09□□□□□ -0.31
UBE2D3-212ENST00000502563 CYP2E1P05181 493 aaPredicted RBP13.09□□□□□ -0.31
UBE2D3-212ENST00000502563 LDHCP07864 332 aa13.09□□□□□ -0.31
UBE2D3-212ENST00000502563 FAM83AQ86UY5 434 aa13.09□□□□□ -0.31
UBE2D3-212ENST00000502563 NSUN4Q96CB9 384 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-212ENST00000502563 GPATCH3Q96I76 525 aa13.09□□□□□ -0.31
UBE2D3-212ENST00000502563 ECHDC1Q9NTX5 307 aa13.09□□□□□ -0.31
UBE2D3-212ENST00000502563 JAG2Q9Y219 1238 aa13.09□□□□□ -0.31
UBE2D3-212ENST00000502563 SALL3Q9BXA9 1300 aa13.09□□□□□ -0.31
UBE2D3-212ENST00000502563 RFX7Q2KHR2 1363 aa13.08□□□□□ -0.31
UBE2D3-212ENST00000502563 GPR75-ASB3A0A0A6YYF3 556 aa13.08□□□□□ -0.32
UBE2D3-212ENST00000502563 TMEM88BA6NKF7 163 aa13.08□□□□□ -0.32
UBE2D3-212ENST00000502563 F8W031 263 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-212ENST00000502563 CENPBP07199 599 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-212ENST00000502563 RBM26Q5T8P6 1007 aaKnown RBP13.08□□□□□ -0.32
UBE2D3-212ENST00000502563 PI16Q6UXB8 463 aa13.08□□□□□ -0.32
UBE2D3-212ENST00000502563 DZIP1Q86YF9 867 aaKnown RBP13.08□□□□□ -0.32
UBE2D3-212ENST00000502563 HAUS7Q99871 368 aa13.08□□□□□ -0.32
UBE2D3-212ENST00000502563 DAGLAQ9Y4D2 1042 aa13.08□□□□□ -0.32
UBE2D3-212ENST00000502563 MROH7-TTC4A0A0A0MT08 1334 aa13.08□□□□□ -0.32
UBE2D3-212ENST00000502563 POLR2AP24928 1970 aaKnown RBP13.07□□□□□ -0.32
UBE2D3-212ENST00000502563 ZAP70P43403 619 aa13.07□□□□□ -0.32
UBE2D3-212ENST00000502563 TNNI2P48788 182 aa13.07□□□□□ -0.32
UBE2D3-212ENST00000502563 PPP4CP60510 307 aa13.07□□□□□ -0.32
UBE2D3-212ENST00000502563 MECOMQ03112 1051 aa13.07□□□□□ -0.32
UBE2D3-212ENST00000502563 IDI2Q9BXS1 227 aa13.07□□□□□ -0.32
UBE2D3-212ENST00000502563 GLIS2Q9BZE0 524 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-212ENST00000502563 ZNF70Q9UC06 446 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-212ENST00000502563 ABCF2Q9UG63 623 aa13.07□□□□□ -0.32
UBE2D3-212ENST00000502563 COL2A1P02458 1487 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-212ENST00000502563 MYH2Q9UKX2 1941 aa13.06□□□□□ -0.32
UBE2D3-212ENST00000502563 RASSF10A6NK89 507 aa13.06□□□□□ -0.32
UBE2D3-212ENST00000502563 HAX1O00165 279 aa13.06□□□□□ -0.32
UBE2D3-212ENST00000502563 ERC2O15083 957 aa13.06□□□□□ -0.32
UBE2D3-212ENST00000502563 RBM5P52756 815 aaKnown RBP eCLIP13.06□□□□□ -0.32
UBE2D3-212ENST00000502563 MAP3K12Q12852 859 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms