RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 GEMIN8Q9NWZ8 242 aaKnown RBP7.41□□□□□ -1.22
SSBP1-213ENST00000496622 SLIT2O94813 1529 aa7.41□□□□□ -1.22
SSBP1-213ENST00000496622 DTNBO60941 627 aa7.41□□□□□ -1.22
SSBP1-213ENST00000496622 HSPA1AP0DMV8 641 aaKnown RBP7.41□□□□□ -1.22
SSBP1-213ENST00000496622 HSPA1BP0DMV9 641 aaKnown RBP7.41□□□□□ -1.22
SSBP1-213ENST00000496622 ARMCX6Q7L4S7 300 aa7.41□□□□□ -1.22
SSBP1-213ENST00000496622 USP21Q9UK80 565 aa7.41□□□□□ -1.22
SSBP1-213ENST00000496622 PLCH1Q4KWH8 1693 aa7.41□□□□□ -1.22
SSBP1-213ENST00000496622 SPATA31A5Q5VU36 1347 aa7.4□□□□□ -1.22
SSBP1-213ENST00000496622 SPATA31A7Q8IWB4 1347 aa7.4□□□□□ -1.22
SSBP1-213ENST00000496622 DNAJC14Q6Y2X3 702 aaPredicted RBP7.4□□□□□ -1.22
SSBP1-213ENST00000496622 RINLQ6ZS11 566 aa7.4□□□□□ -1.22
SSBP1-213ENST00000496622 FAM160A2Q8N612 972 aaPredicted RBP7.4□□□□□ -1.22
SSBP1-213ENST00000496622 PI4K2BQ8TCG2 481 aa7.4□□□□□ -1.22
SSBP1-213ENST00000496622 KIF1BPQ96EK5 621 aa7.4□□□□□ -1.22
SSBP1-213ENST00000496622 PRR14Q9BWN1 585 aa7.4□□□□□ -1.22
SSBP1-213ENST00000496622 C5P01031 1676 aa7.4□□□□□ -1.22
SSBP1-213ENST00000496622 RREB1Q92766 1687 aa7.4□□□□□ -1.23
SSBP1-213ENST00000496622 LOC102724159A0A0B4J2E5 919 aa7.4□□□□□ -1.23
SSBP1-213ENST00000496622 FDX1P10109 184 aa7.4□□□□□ -1.23
SSBP1-213ENST00000496622 CYP19A1P11511 503 aaPredicted RBP7.4□□□□□ -1.23
SSBP1-213ENST00000496622 ARID4AP29374 1257 aaPredicted RBP7.4□□□□□ -1.23
SSBP1-213ENST00000496622 CASP7P55210 303 aa7.4□□□□□ -1.23
SSBP1-213ENST00000496622 PTPN12Q05209 780 aaKnown RBP7.4□□□□□ -1.23
SSBP1-213ENST00000496622 ITPK1Q13572 414 aa7.4□□□□□ -1.23
SSBP1-213ENST00000496622 PWP2Q15269 919 aaKnown RBP7.4□□□□□ -1.23
SSBP1-213ENST00000496622 EXOC8Q8IYI6 725 aa7.4□□□□□ -1.23
SSBP1-213ENST00000496622 ZNF513Q8N8E2 541 aaPredicted RBP7.4□□□□□ -1.23
SSBP1-213ENST00000496622 PUS3Q9BZE2 481 aaKnown RBP7.4□□□□□ -1.23
SSBP1-213ENST00000496622 BOLA2Q9H3K6 86 aa7.4□□□□□ -1.23
SSBP1-213ENST00000496622 SCN11AQ9UI33 1791 aa7.4□□□□□ -1.23
SSBP1-213ENST00000496622 GOLIM4O00461 696 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 STARD3NLO95772 234 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 G3BP1Q13283 466 aaKnown RBP eCLIP7.39□□□□□ -1.23
SSBP1-213ENST00000496622 MTX1Q13505 466 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 CCDC96Q2M329 555 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 SLFNL1Q499Z3 407 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 LRRC24Q50LG9 513 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 PLA2G2CQ5R387 149 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 CLASRPQ8N2M8 674 aaKnown RBP7.39□□□□□ -1.23
SSBP1-213ENST00000496622 PROCA1Q8NCQ7 364 aaPredicted RBP7.39□□□□□ -1.23
SSBP1-213ENST00000496622 BCL9O00512 1426 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 NRAPQ86VF7 1730 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 KCPQ6ZWJ8 1503 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 MRC1P22897 1456 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 RNF223E7ERA6 249 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 TIMM10P62072 90 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 FOXO4P98177 505 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 TFCP2Q12800 502 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 TAF3Q5VWG9 929 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 CWC27Q6UX04 472 aaKnown RBP7.39□□□□□ -1.23
SSBP1-213ENST00000496622 RNF217Q8TC41 542 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 USP26Q9BXU7 913 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 OSBPL3Q9H4L5 887 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 YY1AP1Q9H869 796 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 ANO2Q9NQ90 1003 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 ADAMTS7Q9UKP4 1686 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 COL14A1Q05707 1796 aaKnown RBP7.39□□□□□ -1.23
SSBP1-213ENST00000496622 PXDNLA1KZ92 1463 aa7.39□□□□□ -1.23
SSBP1-213ENST00000496622 UTYO14607 1347 aa7.38□□□□□ -1.23
SSBP1-213ENST00000496622 GLI3P10071 1580 aa7.38□□□□□ -1.23
SSBP1-213ENST00000496622 LOC102724428A0A0B4J2F2 783 aa7.38□□□□□ -1.23
SSBP1-213ENST00000496622 C6orf229H3BNL8 230 aa7.38□□□□□ -1.23
SSBP1-213ENST00000496622 IFIT2P09913 472 aaKnown RBP7.38□□□□□ -1.23
SSBP1-213ENST00000496622 RFX5P48382 616 aaPredicted RBP7.38□□□□□ -1.23
SSBP1-213ENST00000496622 SIK1P57059 783 aa7.38□□□□□ -1.23
SSBP1-213ENST00000496622 NOL8Q76FK4 1167 aaKnown RBP7.38□□□□□ -1.23
SSBP1-213ENST00000496622 OTUD6BQ8N6M0 293 aa7.38□□□□□ -1.23
SSBP1-213ENST00000496622 CWC25Q9NXE8 425 aaPredicted RBP7.38□□□□□ -1.23
SSBP1-213ENST00000496622 PALD1Q9ULE6 856 aa7.38□□□□□ -1.23
SSBP1-213ENST00000496622 SIPA1L3O60292 1781 aaPredicted RBP7.38□□□□□ -1.23
SSBP1-213ENST00000496622 VIRMAQ69YN4 1812 aaKnown RBP7.38□□□□□ -1.23
SSBP1-213ENST00000496622 H7C1W4 665 aa7.38□□□□□ -1.23
SSBP1-213ENST00000496622 SNAP23O00161 211 aa7.38□□□□□ -1.23
SSBP1-213ENST00000496622 NR1I2O75469 434 aa7.38□□□□□ -1.23
SSBP1-213ENST00000496622 ZSCAN20P17040 1043 aaPredicted RBP7.38□□□□□ -1.23
SSBP1-213ENST00000496622 CHMLP26374 656 aa7.38□□□□□ -1.23
SSBP1-213ENST00000496622 SLC20A2Q08357 652 aa7.38□□□□□ -1.23
SSBP1-213ENST00000496622 NBPF9Q3BBW0 867 aa7.38□□□□□ -1.23
SSBP1-213ENST00000496622 MAP7D2Q96T17 732 aa7.38□□□□□ -1.23
SSBP1-213ENST00000496622 PKD1L3Q7Z443 1732 aa7.37□□□□□ -1.23
SSBP1-213ENST00000496622 RAB11FIP3O75154 756 aa7.37□□□□□ -1.23
SSBP1-213ENST00000496622 FRAT2O75474 233 aaPredicted RBP7.37□□□□□ -1.23
SSBP1-213ENST00000496622 POLD1P28340 1107 aa7.37□□□□□ -1.23
SSBP1-213ENST00000496622 CRKLP46109 303 aaKnown RBP7.37□□□□□ -1.23
SSBP1-213ENST00000496622 MAP2K1Q02750 393 aaPredicted RBP7.37□□□□□ -1.23
SSBP1-213ENST00000496622 TCIRG1Q13488 830 aa7.37□□□□□ -1.23
SSBP1-213ENST00000496622 BRICD5Q6PL45 260 aa7.37□□□□□ -1.23
SSBP1-213ENST00000496622 AMIGO3Q86WK7 504 aa7.37□□□□□ -1.23
SSBP1-213ENST00000496622 CCDC24Q8N4L8 307 aa7.37□□□□□ -1.23
SSBP1-213ENST00000496622 NEUROD6Q96NK8 337 aa7.37□□□□□ -1.23
SSBP1-213ENST00000496622 DBNLQ9UJU6 430 aaKnown RBP7.37□□□□□ -1.23
SSBP1-213ENST00000496622 BRD1O95696 1058 aa7.37□□□□□ -1.23
SSBP1-213ENST00000496622 COL9A3Q14050 684 aaPredicted RBP7.37□□□□□ -1.23
SSBP1-213ENST00000496622 INTS5Q6P9B9 1019 aaKnown RBP7.37□□□□□ -1.23
SSBP1-213ENST00000496622 DZIP3Q86Y13 1208 aaKnown RBP7.37□□□□□ -1.23
SSBP1-213ENST00000496622 ABHD8Q96I13 439 aa7.37□□□□□ -1.23
SSBP1-213ENST00000496622 DBNDD2Q9BQY9 259 aa7.37□□□□□ -1.23
SSBP1-213ENST00000496622 UPF3BQ9BZI7 483 aaKnown RBP7.37□□□□□ -1.23
SSBP1-213ENST00000496622 STAP2Q9UGK3 403 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms