RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 CFAP100Q494V2 611 aa19.16■□□□□ 0.66
PCCB-218ENST00000490504 MFSD14BQ5SR56 506 aa19.16■□□□□ 0.66
PCCB-218ENST00000490504 MTMR14Q8NCE2 650 aa19.16■□□□□ 0.66
PCCB-218ENST00000490504 POLR2AP24928 1970 aaKnown RBP19.16■□□□□ 0.66
PCCB-218ENST00000490504 SRGAP3O43295 1099 aa19.15■□□□□ 0.66
PCCB-218ENST00000490504 LBX1P52954 281 aa19.15■□□□□ 0.66
PCCB-218ENST00000490504 CAVIN4Q5BKX8 364 aa19.15■□□□□ 0.66
PCCB-218ENST00000490504 MOB2Q70IA6 237 aa19.15■□□□□ 0.66
PCCB-218ENST00000490504 PRMT6Q96LA8 375 aaPredicted RBP19.15■□□□□ 0.66
PCCB-218ENST00000490504 PA2G4Q9UQ80 394 aaKnown RBP19.15■□□□□ 0.66
PCCB-218ENST00000490504 EXOC6BQ9Y2D4 811 aa19.15■□□□□ 0.66
PCCB-218ENST00000490504 AOX1Q06278 1338 aa19.15■□□□□ 0.66
PCCB-218ENST00000490504 FAM155AB1AL88 458 aaPredicted RBP19.14■□□□□ 0.66
PCCB-218ENST00000490504 APBB1O00213 710 aa19.14■□□□□ 0.66
PCCB-218ENST00000490504 HSPA8P11142 646 aaKnown RBP19.14■□□□□ 0.66
PCCB-218ENST00000490504 ZNF157P51786 506 aaPredicted RBP19.14■□□□□ 0.66
PCCB-218ENST00000490504 BMP2KLQ5H9B9 411 aa19.14■□□□□ 0.66
PCCB-218ENST00000490504 SPDYE2BA6NHP3 402 aa19.14■□□□□ 0.65
PCCB-218ENST00000490504 SMARCA5O60264 1052 aaPredicted RBP19.14■□□□□ 0.65
PCCB-218ENST00000490504 CIAO1O76071 339 aa19.14■□□□□ 0.65
PCCB-218ENST00000490504 IFIT1P09914 478 aaKnown RBP19.14■□□□□ 0.65
PCCB-218ENST00000490504 SPDYE6P0CI01 402 aa19.14■□□□□ 0.65
PCCB-218ENST00000490504 CHAF1AQ13111 956 aaPredicted RBP19.14■□□□□ 0.65
PCCB-218ENST00000490504 NOGQ13253 232 aa19.14■□□□□ 0.65
PCCB-218ENST00000490504 GRIK5Q16478 980 aa19.14■□□□□ 0.65
PCCB-218ENST00000490504 APOBEC3FQ8IUX4 373 aaKnown RBP19.14■□□□□ 0.65
PCCB-218ENST00000490504 PLEKHM2Q8IWE5 1019 aa19.14■□□□□ 0.65
PCCB-218ENST00000490504 TNS4Q8IZW8 715 aa19.14■□□□□ 0.65
PCCB-218ENST00000490504 LRRCC1Q9C099 1032 aa19.14■□□□□ 0.65
PCCB-218ENST00000490504 PRDM10Q9NQV6 1147 aa19.14■□□□□ 0.65
PCCB-218ENST00000490504 RAB11FIP3O75154 756 aa19.13■□□□□ 0.65
PCCB-218ENST00000490504 RBM5P52756 815 aaKnown RBP eCLIP19.13■□□□□ 0.65
PCCB-218ENST00000490504 FKBP1BP68106 108 aa19.13■□□□□ 0.65
PCCB-218ENST00000490504 BEGAINQ9BUH8 593 aa19.13■□□□□ 0.65
PCCB-218ENST00000490504 FBXO3Q9UK99 471 aa19.13■□□□□ 0.65
PCCB-218ENST00000490504 TTF2Q9UNY4 1162 aaKnown RBP19.13■□□□□ 0.65
PCCB-218ENST00000490504 THSD7BQ9C0I4 1608 aa19.12■□□□□ 0.65
PCCB-218ENST00000490504 CLRN2A0PK11 232 aa19.12■□□□□ 0.65
PCCB-218ENST00000490504 FRAT2O75474 233 aaPredicted RBP19.12■□□□□ 0.65
PCCB-218ENST00000490504 LPIN2Q92539 896 aa19.12■□□□□ 0.65
PCCB-218ENST00000490504 CCDC102AQ96A19 550 aa19.12■□□□□ 0.65
PCCB-218ENST00000490504 COPRSQ9NQ92 184 aa19.12■□□□□ 0.65
PCCB-218ENST00000490504 CEP126Q9P2H0 1117 aa19.12■□□□□ 0.65
PCCB-218ENST00000490504 UBE2Q2LH0YL09 131 aa19.11■□□□□ 0.65
PCCB-218ENST00000490504 SLC5A1P13866 664 aa19.11■□□□□ 0.65
PCCB-218ENST00000490504 DEFB129Q9H1M3 183 aa19.11■□□□□ 0.65
PCCB-218ENST00000490504 TSKSQ9UJT2 592 aa19.11■□□□□ 0.65
PCCB-218ENST00000490504 IL15P40933 162 aaPredicted RBP19.11■□□□□ 0.65
PCCB-218ENST00000490504 HSP90AB4PQ58FF6 505 aa19.11■□□□□ 0.65
PCCB-218ENST00000490504 SERPINA10Q9UK55 444 aa19.11■□□□□ 0.65
PCCB-218ENST00000490504 MYO1BO43795 1136 aa19.1■□□□□ 0.65
PCCB-218ENST00000490504 SURF6O75683 361 aaKnown RBP19.1■□□□□ 0.65
PCCB-218ENST00000490504 SLC10A3P09131 477 aa19.1■□□□□ 0.65
PCCB-218ENST00000490504 NF2P35240 595 aa19.1■□□□□ 0.65
PCCB-218ENST00000490504 KIF23Q02241 960 aaPredicted RBP19.1■□□□□ 0.65
PCCB-218ENST00000490504 TTLL12Q14166 644 aaPredicted RBP19.1■□□□□ 0.65
PCCB-218ENST00000490504 ATP2B3Q16720 1220 aa19.1■□□□□ 0.65
PCCB-218ENST00000490504 VEZTQ9HBM0 779 aa19.1■□□□□ 0.65
PCCB-218ENST00000490504 PRKG1Q13976 671 aa19.09■□□□□ 0.65
PCCB-218ENST00000490504 RASAL3Q86YV0 1011 aa19.09■□□□□ 0.65
PCCB-218ENST00000490504 TBC1D22AQ8WUA7 517 aa19.09■□□□□ 0.65
PCCB-218ENST00000490504 CRKP46108 304 aa19.08■□□□□ 0.65
PCCB-218ENST00000490504 TTC22Q5TAA0 569 aa19.08■□□□□ 0.65
PCCB-218ENST00000490504 OTUD7AQ8TE49 926 aaPredicted RBP19.08■□□□□ 0.65
PCCB-218ENST00000490504 NOP58Q9Y2X3 529 aaKnown RBP19.08■□□□□ 0.65
PCCB-218ENST00000490504 BCL11AQ9H165 835 aa19.07■□□□□ 0.64
PCCB-218ENST00000490504 TDRD3Q9H7E2 651 aaKnown RBP19.07■□□□□ 0.64
PCCB-218ENST00000490504 ZNF70Q9UC06 446 aaPredicted RBP19.07■□□□□ 0.64
PCCB-218ENST00000490504 FZD1Q9UP38 647 aa19.07■□□□□ 0.64
PCCB-218ENST00000490504 SEC24BO95487 1268 aa19.07■□□□□ 0.64
PCCB-218ENST00000490504 SPDYE2Q495Y8 402 aa19.07■□□□□ 0.64
PCCB-218ENST00000490504 KIF1BPQ96EK5 621 aa19.07■□□□□ 0.64
PCCB-218ENST00000490504 OSBPL3Q9H4L5 887 aa19.07■□□□□ 0.64
PCCB-218ENST00000490504 UPF2Q9HAU5 1272 aaKnown RBP19.07■□□□□ 0.64
PCCB-218ENST00000490504 CA12O43570 354 aa19.06■□□□□ 0.64
PCCB-218ENST00000490504 ADORA1P30542 326 aa19.06■□□□□ 0.64
PCCB-218ENST00000490504 CSRNP1Q96S65 589 aa19.06■□□□□ 0.64
PCCB-218ENST00000490504 PPP2R3BQ9Y5P8 575 aa19.06■□□□□ 0.64
PCCB-218ENST00000490504 SALL3Q9BXA9 1300 aa19.06■□□□□ 0.64
PCCB-218ENST00000490504 PAPPA2Q9BXP8 1791 aa19.06■□□□□ 0.64
PCCB-218ENST00000490504 GSPT1P15170 499 aaKnown RBP19.05■□□□□ 0.64
PCCB-218ENST00000490504 RASA3Q14644 834 aa19.05■□□□□ 0.64
PCCB-218ENST00000490504 ARMC9Q7Z3E5 817 aa19.05■□□□□ 0.64
PCCB-218ENST00000490504 RHPN1Q8TCX5 695 aa19.05■□□□□ 0.64
PCCB-218ENST00000490504 COL1A1P02452 1464 aaPredicted RBP19.04■□□□□ 0.64
PCCB-218ENST00000490504 PHKA1P46020 1223 aa19.04■□□□□ 0.64
PCCB-218ENST00000490504 PDE1AP54750 535 aa19.04■□□□□ 0.64
PCCB-218ENST00000490504 TIMM10P62072 90 aa19.04■□□□□ 0.64
PCCB-218ENST00000490504 HDLBPQ00341 1268 aaKnown RBP19.04■□□□□ 0.64
PCCB-218ENST00000490504 TFCP2Q12800 502 aa19.04■□□□□ 0.64
PCCB-218ENST00000490504 OS9Q13438 667 aaPredicted RBP19.04■□□□□ 0.64
PCCB-218ENST00000490504 LDLRAD1Q5T700 205 aa19.04■□□□□ 0.64
PCCB-218ENST00000490504 NBPF12Q5TAG4 269 aaPredicted RBP19.04■□□□□ 0.64
PCCB-218ENST00000490504 ERC1Q8IUD2 1116 aa19.04■□□□□ 0.64
PCCB-218ENST00000490504 WDR66Q8TBY9 1149 aa19.04■□□□□ 0.64
PCCB-218ENST00000490504 IPO9Q96P70 1041 aaKnown RBP19.04■□□□□ 0.64
PCCB-218ENST00000490504 ANGEL1Q9UNK9 670 aaKnown RBP19.04■□□□□ 0.64
PCCB-218ENST00000490504 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.04■□□□□ 0.64
PCCB-218ENST00000490504 TEKT1Q969V4 418 aa19.03■□□□□ 0.64
PCCB-218ENST00000490504 GNL3LQ9NVN8 582 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms