RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 PPP1R12BO60237 982 aaPredicted RBP24.3■■□□□ 1.48
TNFRSF1B-202ENST00000489921 SLC10A4Q96EP9 437 aa24.3■■□□□ 1.48
TNFRSF1B-202ENST00000489921 R3HDMLQ9H3Y0 253 aa24.3■■□□□ 1.48
TNFRSF1B-202ENST00000489921 UNCXA6NJT0 531 aa24.29■■□□□ 1.48
TNFRSF1B-202ENST00000489921 UBTFL1P0CB47 393 aaPredicted RBP24.29■■□□□ 1.48
TNFRSF1B-202ENST00000489921 HDLBPQ00341 1268 aaKnown RBP24.29■■□□□ 1.48
TNFRSF1B-202ENST00000489921 TBC1D22AQ8WUA7 517 aa24.29■■□□□ 1.48
TNFRSF1B-202ENST00000489921 API5Q9BZZ5 524 aaKnown RBP24.29■■□□□ 1.48
TNFRSF1B-202ENST00000489921 ZNF296Q8WUU4 475 aaPredicted RBP24.28■■□□□ 1.48
TNFRSF1B-202ENST00000489921 LPIN2Q92539 896 aa24.28■■□□□ 1.48
TNFRSF1B-202ENST00000489921 WNK4Q96J92 1243 aa24.28■■□□□ 1.48
TNFRSF1B-202ENST00000489921 MRIQ9BWK5 157 aa24.28■■□□□ 1.48
TNFRSF1B-202ENST00000489921 CFHR5Q9BXR6 569 aa24.28■■□□□ 1.48
TNFRSF1B-202ENST00000489921 LRRFIP2Q9Y608 721 aaKnown RBP24.28■■□□□ 1.48
TNFRSF1B-202ENST00000489921 FRAT2O75474 233 aaPredicted RBP24.27■■□□□ 1.48
TNFRSF1B-202ENST00000489921 IFIT1P09914 478 aaKnown RBP24.27■■□□□ 1.48
TNFRSF1B-202ENST00000489921 GJA5P36382 358 aa24.27■■□□□ 1.48
TNFRSF1B-202ENST00000489921 SREBF2Q12772 1141 aa24.27■■□□□ 1.48
TNFRSF1B-202ENST00000489921 MEIS3Q99687 375 aa24.27■■□□□ 1.48
TNFRSF1B-202ENST00000489921 TCP10L2B9ZVM9 353 aa24.26■■□□□ 1.47
TNFRSF1B-202ENST00000489921 CIAO1O76071 339 aa24.26■■□□□ 1.47
TNFRSF1B-202ENST00000489921 ZBTB48P10074 688 aaPredicted RBP24.26■■□□□ 1.47
TNFRSF1B-202ENST00000489921 TNFAIP1Q13829 316 aa24.26■■□□□ 1.47
TNFRSF1B-202ENST00000489921 NOM1Q5C9Z4 860 aaKnown RBP24.26■■□□□ 1.47
TNFRSF1B-202ENST00000489921 CTU1Q7Z7A3 348 aaKnown RBP24.26■■□□□ 1.47
TNFRSF1B-202ENST00000489921 ARHGAP45Q92619 1136 aa24.26■■□□□ 1.47
TNFRSF1B-202ENST00000489921 TMEM39BQ9GZU3 492 aa24.26■■□□□ 1.47
TNFRSF1B-202ENST00000489921 SIL1Q9H173 461 aa24.26■■□□□ 1.47
TNFRSF1B-202ENST00000489921 FBXO3Q9UK99 471 aa24.26■■□□□ 1.47
TNFRSF1B-202ENST00000489921 HTTP42858 3142 aa24.25■■□□□ 1.47
TNFRSF1B-202ENST00000489921 IREB2P48200 963 aaKnown RBP24.25■■□□□ 1.47
TNFRSF1B-202ENST00000489921 INTS3Q68E01 1043 aaKnown RBP24.25■■□□□ 1.47
TNFRSF1B-202ENST00000489921 APOBEC3HQ6NTF7 200 aaKnown RBP24.25■■□□□ 1.47
TNFRSF1B-202ENST00000489921 ZDHHC15Q96MV8 337 aa24.25■■□□□ 1.47
TNFRSF1B-202ENST00000489921 PA2G4Q9UQ80 394 aaKnown RBP24.25■■□□□ 1.47
TNFRSF1B-202ENST00000489921 GPR25O00155 361 aa24.24■■□□□ 1.47
TNFRSF1B-202ENST00000489921 SLC5A1P13866 664 aa24.24■■□□□ 1.47
TNFRSF1B-202ENST00000489921 TEKT1Q969V4 418 aa24.24■■□□□ 1.47
TNFRSF1B-202ENST00000489921 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.24■■□□□ 1.47
TNFRSF1B-202ENST00000489921 SUGT1Q9Y2Z0 365 aa24.24■■□□□ 1.47
TNFRSF1B-202ENST00000489921 MANSC4A6NHS7 340 aaPredicted RBP24.23■■□□□ 1.47
TNFRSF1B-202ENST00000489921 CACNB3P54284 484 aa24.23■■□□□ 1.47
TNFRSF1B-202ENST00000489921 INHBEP58166 350 aa24.23■■□□□ 1.47
TNFRSF1B-202ENST00000489921 IFNL1Q8IU54 200 aa24.23■■□□□ 1.47
TNFRSF1B-202ENST00000489921 ANKRD13AQ8IZ07 590 aa24.23■■□□□ 1.47
TNFRSF1B-202ENST00000489921 TNNQ9UQP3 1299 aa24.23■■□□□ 1.47
TNFRSF1B-202ENST00000489921 IGF2BP3O00425 579 aaKnown RBP eCLIP24.22■■□□□ 1.47
TNFRSF1B-202ENST00000489921 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.22■■□□□ 1.47
TNFRSF1B-202ENST00000489921 COPRSQ9NQ92 184 aa24.22■■□□□ 1.47
TNFRSF1B-202ENST00000489921 ATP2B3Q16720 1220 aa24.21■■□□□ 1.47
TNFRSF1B-202ENST00000489921 HHIPL2Q6UWX4 724 aa24.21■■□□□ 1.47
TNFRSF1B-202ENST00000489921 CEP126Q9P2H0 1117 aa24.21■■□□□ 1.47
TNFRSF1B-202ENST00000489921 BCAR3O75815 825 aa24.2■■□□□ 1.46
TNFRSF1B-202ENST00000489921 WDR66Q8TBY9 1149 aa24.2■■□□□ 1.46
TNFRSF1B-202ENST00000489921 PTPN18Q99952 460 aa24.2■■□□□ 1.46
TNFRSF1B-202ENST00000489921 CENPFP49454 3210 aa24.2■■□□□ 1.46
TNFRSF1B-202ENST00000489921 TESPA1A2RU30 521 aaPredicted RBP24.19■■□□□ 1.46
TNFRSF1B-202ENST00000489921 IL15P40933 162 aaPredicted RBP24.19■■□□□ 1.46
TNFRSF1B-202ENST00000489921 TNNI2P48788 182 aa24.19■■□□□ 1.46
TNFRSF1B-202ENST00000489921 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.19■■□□□ 1.46
TNFRSF1B-202ENST00000489921 CNKSR2Q8WXI2 1034 aa24.19■■□□□ 1.46
TNFRSF1B-202ENST00000489921 ELP3Q9H9T3 547 aa24.19■■□□□ 1.46
TNFRSF1B-202ENST00000489921 MAST3O60307 1309 aa24.18■■□□□ 1.46
TNFRSF1B-202ENST00000489921 ALDH1A1P00352 501 aa24.18■■□□□ 1.46
TNFRSF1B-202ENST00000489921 TRIM27P14373 513 aa24.18■■□□□ 1.46
TNFRSF1B-202ENST00000489921 PHKA1P46020 1223 aa24.18■■□□□ 1.46
TNFRSF1B-202ENST00000489921 MLLT1Q03111 559 aaPredicted RBP24.18■■□□□ 1.46
TNFRSF1B-202ENST00000489921 FKBP1CQ5VVH2 108 aa24.18■■□□□ 1.46
TNFRSF1B-202ENST00000489921 FAM83AQ86UY5 434 aa24.18■■□□□ 1.46
TNFRSF1B-202ENST00000489921 MS4A4AQ96JQ5 239 aa24.18■■□□□ 1.46
TNFRSF1B-202ENST00000489921 HDAC5Q9UQL6 1122 aa24.18■■□□□ 1.46
TNFRSF1B-202ENST00000489921 ZBTB22O15209 634 aa24.17■■□□□ 1.46
TNFRSF1B-202ENST00000489921 FKTNO75072 461 aa24.17■■□□□ 1.46
TNFRSF1B-202ENST00000489921 PRDX5P30044 214 aa24.17■■□□□ 1.46
TNFRSF1B-202ENST00000489921 ADORA1P30542 326 aa24.17■■□□□ 1.46
TNFRSF1B-202ENST00000489921 MTX1Q13505 466 aa24.17■■□□□ 1.46
TNFRSF1B-202ENST00000489921 OPTNQ96CV9 577 aa24.17■■□□□ 1.46
TNFRSF1B-202ENST00000489921 HPS5Q9UPZ3 1129 aa24.17■■□□□ 1.46
TNFRSF1B-202ENST00000489921 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.17■■□□□ 1.46
TNFRSF1B-202ENST00000489921 GNAI3P08754 354 aa24.16■■□□□ 1.46
TNFRSF1B-202ENST00000489921 MAP3K9P80192 1104 aa24.16■■□□□ 1.46
TNFRSF1B-202ENST00000489921 VGLL4Q14135 290 aa24.16■■□□□ 1.46
TNFRSF1B-202ENST00000489921 PKN2Q16513 984 aaKnown RBP24.16■■□□□ 1.46
TNFRSF1B-202ENST00000489921 DAGLAQ9Y4D2 1042 aa24.16■■□□□ 1.46
TNFRSF1B-202ENST00000489921 SALL1Q9NSC2 1324 aa24.15■■□□□ 1.46
TNFRSF1B-202ENST00000489921 TIMM10P62072 90 aa24.15■■□□□ 1.46
TNFRSF1B-202ENST00000489921 DIXDC1Q155Q3 683 aa24.15■■□□□ 1.46
TNFRSF1B-202ENST00000489921 ATF7IPQ6VMQ6 1270 aa24.15■■□□□ 1.46
TNFRSF1B-202ENST00000489921 MIER1Q8N108 512 aa24.15■■□□□ 1.46
TNFRSF1B-202ENST00000489921 SRGAP3O43295 1099 aa24.13■■□□□ 1.45
TNFRSF1B-202ENST00000489921 CCDC102BQ68D86 513 aa24.13■■□□□ 1.45
TNFRSF1B-202ENST00000489921 CDC42EP5Q6NZY7 148 aa24.13■■□□□ 1.45
TNFRSF1B-202ENST00000489921 RPAP1Q9BWH6 1393 aaPredicted RBP24.13■■□□□ 1.45
TNFRSF1B-202ENST00000489921 MYH2Q9UKX2 1941 aa24.12■■□□□ 1.45
TNFRSF1B-202ENST00000489921 SEMA3EO15041 775 aa24.12■■□□□ 1.45
TNFRSF1B-202ENST00000489921 IPO8O15397 1037 aaKnown RBP24.12■■□□□ 1.45
TNFRSF1B-202ENST00000489921 SOX10P56693 466 aa24.12■■□□□ 1.45
TNFRSF1B-202ENST00000489921 CRHR2Q13324 411 aa24.12■■□□□ 1.45
TNFRSF1B-202ENST00000489921 BRI3BPQ8WY22 251 aa24.12■■□□□ 1.45
TNFRSF1B-202ENST00000489921 FRAT1Q92837 279 aaPredicted RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms