RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 SERPINA10Q9UK55 444 aa14.83□□□□□ -0.04
ACTN4-206ENST00000489451 MKI67P46013 3256 aaKnown RBP14.83□□□□□ -0.04
ACTN4-206ENST00000489451 MROH5Q6ZUA9 1318 aa14.83□□□□□ -0.04
ACTN4-206ENST00000489451 MYO1BO43795 1136 aa14.82□□□□□ -0.04
ACTN4-206ENST00000489451 ZBTB48P10074 688 aaPredicted RBP14.82□□□□□ -0.04
ACTN4-206ENST00000489451 CRKP46108 304 aa14.82□□□□□ -0.04
ACTN4-206ENST00000489451 RFX5P48382 616 aaPredicted RBP14.82□□□□□ -0.04
ACTN4-206ENST00000489451 RBM5P52756 815 aaKnown RBP eCLIP14.82□□□□□ -0.04
ACTN4-206ENST00000489451 SLFN5Q08AF3 891 aa14.82□□□□□ -0.04
ACTN4-206ENST00000489451 DZIP1LQ8IYY4 767 aaKnown RBP14.82□□□□□ -0.04
ACTN4-206ENST00000489451 SLC10A4Q96EP9 437 aa14.82□□□□□ -0.04
ACTN4-206ENST00000489451 CDCA7LQ96GN5 454 aa14.82□□□□□ -0.04
ACTN4-206ENST00000489451 PTPN18Q99952 460 aa14.82□□□□□ -0.04
ACTN4-206ENST00000489451 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.82□□□□□ -0.04
ACTN4-206ENST00000489451 PTPRCP08575 1304 aa14.82□□□□□ -0.04
ACTN4-206ENST00000489451 MYH13Q9UKX3 1938 aa14.82□□□□□ -0.04
ACTN4-206ENST00000489451 MANSC4A6NHS7 340 aaPredicted RBP14.81□□□□□ -0.04
ACTN4-206ENST00000489451 PPP1R12BO60237 982 aaPredicted RBP14.81□□□□□ -0.04
ACTN4-206ENST00000489451 FKTNO75072 461 aa14.81□□□□□ -0.04
ACTN4-206ENST00000489451 PDE8BO95263 885 aa14.81□□□□□ -0.04
ACTN4-206ENST00000489451 FGFR2P21802 821 aa14.81□□□□□ -0.04
ACTN4-206ENST00000489451 SUPT20HL1Q3ZLR7 823 aa14.81□□□□□ -0.04
ACTN4-206ENST00000489451 CNKSR2Q8WXI2 1034 aa14.81□□□□□ -0.04
ACTN4-206ENST00000489451 TMEM39BQ9GZU3 492 aa14.81□□□□□ -0.04
ACTN4-206ENST00000489451 BRCA2P51587 3418 aa14.81□□□□□ -0.04
ACTN4-206ENST00000489451 TESPA1A2RU30 521 aaPredicted RBP14.8□□□□□ -0.04
ACTN4-206ENST00000489451 UNCXA6NJT0 531 aa14.8□□□□□ -0.04
ACTN4-206ENST00000489451 E9PSI1 815 aa14.8□□□□□ -0.04
ACTN4-206ENST00000489451 BCAMP50895 628 aa14.8□□□□□ -0.04
ACTN4-206ENST00000489451 METTL24Q5JXM2 366 aa14.8□□□□□ -0.04
ACTN4-206ENST00000489451 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.8□□□□□ -0.04
ACTN4-206ENST00000489451 POTEFA5A3E0 1075 aa14.79□□□□□ -0.04
ACTN4-206ENST00000489451 TCP10L2B9ZVM9 353 aa14.79□□□□□ -0.04
ACTN4-206ENST00000489451 IREB2P48200 963 aaKnown RBP14.79□□□□□ -0.04
ACTN4-206ENST00000489451 CACNB3P54284 484 aa14.79□□□□□ -0.04
ACTN4-206ENST00000489451 CHAF1AQ13111 956 aaPredicted RBP14.79□□□□□ -0.04
ACTN4-206ENST00000489451 ANKRD13AQ8IZ07 590 aa14.79□□□□□ -0.04
ACTN4-206ENST00000489451 TRMT2AQ8IZ69 625 aaKnown RBP14.79□□□□□ -0.04
ACTN4-206ENST00000489451 MS4A4AQ96JQ5 239 aa14.79□□□□□ -0.04
ACTN4-206ENST00000489451 INHBEP58166 350 aa14.78□□□□□ -0.04
ACTN4-206ENST00000489451 ATG9AQ7Z3C6 839 aa14.78□□□□□ -0.04
ACTN4-206ENST00000489451 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.78□□□□□ -0.04
ACTN4-206ENST00000489451 ELP3Q9H9T3 547 aa14.78□□□□□ -0.04
ACTN4-206ENST00000489451 ZSWIM8A7E2V4 1837 aa14.78□□□□□ -0.04
ACTN4-206ENST00000489451 KIF16BQ96L93 1317 aa14.77□□□□□ -0.04
ACTN4-206ENST00000489451 ALDH1A1P00352 501 aa14.77□□□□□ -0.05
ACTN4-206ENST00000489451 MNX1P50219 401 aaPredicted RBP14.77□□□□□ -0.05
ACTN4-206ENST00000489451 HDLBPQ00341 1268 aaKnown RBP14.77□□□□□ -0.05
ACTN4-206ENST00000489451 CRHR2Q13324 411 aa14.77□□□□□ -0.05
ACTN4-206ENST00000489451 TNFAIP1Q13829 316 aa14.77□□□□□ -0.05
ACTN4-206ENST00000489451 VGLL4Q14135 290 aa14.77□□□□□ -0.05
ACTN4-206ENST00000489451 APOBEC3HQ6NTF7 200 aaKnown RBP14.77□□□□□ -0.05
ACTN4-206ENST00000489451 OTOP1Q7RTM1 612 aa14.77□□□□□ -0.05
ACTN4-206ENST00000489451 OPTNQ96CV9 577 aa14.77□□□□□ -0.05
ACTN4-206ENST00000489451 SZT2Q5T011 3432 aa14.76□□□□□ -0.05
ACTN4-206ENST00000489451 PUM3Q15397 648 aaKnown RBP14.76□□□□□ -0.05
ACTN4-206ENST00000489451 ALDH1L2Q3SY69 923 aa14.76□□□□□ -0.05
ACTN4-206ENST00000489451 BRI3BPQ8WY22 251 aa14.76□□□□□ -0.05
ACTN4-206ENST00000489451 ZDHHC15Q96MV8 337 aa14.76□□□□□ -0.05
ACTN4-206ENST00000489451 TRIOBPQ9H2D6 2365 aa14.76□□□□□ -0.05
ACTN4-206ENST00000489451 EYA2O00167 538 aa14.75□□□□□ -0.05
ACTN4-206ENST00000489451 CAVIN4Q5BKX8 364 aa14.75□□□□□ -0.05
ACTN4-206ENST00000489451 INTS3Q68E01 1043 aaKnown RBP14.75□□□□□ -0.05
ACTN4-206ENST00000489451 VPS37DQ86XT2 251 aa14.75□□□□□ -0.05
ACTN4-206ENST00000489451 CD99L2Q8TCZ2 262 aa14.75□□□□□ -0.05
ACTN4-206ENST00000489451 TBC1D22AQ8WUA7 517 aa14.75□□□□□ -0.05
ACTN4-206ENST00000489451 TRIM17Q9Y577 477 aa14.75□□□□□ -0.05
ACTN4-206ENST00000489451 SNCAIPQ9Y6H5 919 aa14.75□□□□□ -0.05
ACTN4-206ENST00000489451 CUL9Q8IWT3 2517 aa14.75□□□□□ -0.05
ACTN4-206ENST00000489451 TEKT1Q969V4 418 aa14.74□□□□□ -0.05
ACTN4-206ENST00000489451 MRIQ9BWK5 157 aa14.74□□□□□ -0.05
ACTN4-206ENST00000489451 SMC4Q9NTJ3 1288 aa14.74□□□□□ -0.05
ACTN4-206ENST00000489451 RPAP1Q9BWH6 1393 aaPredicted RBP14.73□□□□□ -0.05
ACTN4-206ENST00000489451 MAP3K9P80192 1104 aa14.73□□□□□ -0.05
ACTN4-206ENST00000489451 FAM43AQ8N2R8 423 aa14.73□□□□□ -0.05
ACTN4-206ENST00000489451 SPDYE5A6NIY4 337 aa14.72□□□□□ -0.05
ACTN4-206ENST00000489451 FRAT2O75474 233 aaPredicted RBP14.72□□□□□ -0.05
ACTN4-206ENST00000489451 IFIT1P09914 478 aaKnown RBP14.72□□□□□ -0.05
ACTN4-206ENST00000489451 TNNI2P48788 182 aa14.72□□□□□ -0.05
ACTN4-206ENST00000489451 HHIPL2Q6UWX4 724 aa14.72□□□□□ -0.05
ACTN4-206ENST00000489451 FAM83AQ86UY5 434 aa14.72□□□□□ -0.05
ACTN4-206ENST00000489451 LPIN2Q92539 896 aa14.72□□□□□ -0.05
ACTN4-206ENST00000489451 OTUD5Q96G74 571 aa14.72□□□□□ -0.05
ACTN4-206ENST00000489451 NOB1Q9ULX3 412 aaKnown RBP14.72□□□□□ -0.05
ACTN4-206ENST00000489451 PA2G4Q9UQ80 394 aaKnown RBP14.72□□□□□ -0.05
ACTN4-206ENST00000489451 PTPN22Q9Y2R2 807 aa14.72□□□□□ -0.05
ACTN4-206ENST00000489451 SUGT1Q9Y2Z0 365 aa14.72□□□□□ -0.05
ACTN4-206ENST00000489451 CCL15-CCL14A0A0B4J2E2 113 aa14.71□□□□□ -0.05
ACTN4-206ENST00000489451 PRDX5P30044 214 aa14.71□□□□□ -0.05
ACTN4-206ENST00000489451 DIXDC1Q155Q3 683 aa14.71□□□□□ -0.05
ACTN4-206ENST00000489451 CCL15Q16663 113 aa14.71□□□□□ -0.05
ACTN4-206ENST00000489451 FKBP1CQ5VVH2 108 aa14.71□□□□□ -0.05
ACTN4-206ENST00000489451 CHRDL2Q6WN34 429 aa14.71□□□□□ -0.05
ACTN4-206ENST00000489451 ZKSCAN4Q969J2 545 aaPredicted RBP14.71□□□□□ -0.05
ACTN4-206ENST00000489451 SIL1Q9H173 461 aa14.71□□□□□ -0.05
ACTN4-206ENST00000489451 DAGLAQ9Y4D2 1042 aa14.71□□□□□ -0.05
ACTN4-206ENST00000489451 CIAO1O76071 339 aa14.7□□□□□ -0.06
ACTN4-206ENST00000489451 SLC5A1P13866 664 aa14.7□□□□□ -0.06
ACTN4-206ENST00000489451 ADORA1P30542 326 aa14.7□□□□□ -0.06
ACTN4-206ENST00000489451 PHKA1P46020 1223 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 209.8 ms