RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 VPS37DQ86XT2 251 aa14.07□□□□□ -0.16
PCYT1A-215ENST00000488235 REM2Q8IYK8 340 aaPredicted RBP14.07□□□□□ -0.16
PCYT1A-215ENST00000488235 ZNF296Q8WUU4 475 aaPredicted RBP14.07□□□□□ -0.16
PCYT1A-215ENST00000488235 MEIS3Q99687 375 aa14.07□□□□□ -0.16
PCYT1A-215ENST00000488235 PA2G4Q9UQ80 394 aaKnown RBP14.07□□□□□ -0.16
PCYT1A-215ENST00000488235 PPP2R3BQ9Y5P8 575 aa14.07□□□□□ -0.16
PCYT1A-215ENST00000488235 TCP10L2B9ZVM9 353 aa14.06□□□□□ -0.16
PCYT1A-215ENST00000488235 UBTFL1P0CB47 393 aaPredicted RBP14.06□□□□□ -0.16
PCYT1A-215ENST00000488235 CAVIN4Q5BKX8 364 aa14.06□□□□□ -0.16
PCYT1A-215ENST00000488235 WNK4Q96J92 1243 aa14.06□□□□□ -0.16
PCYT1A-215ENST00000488235 TMEM39BQ9GZU3 492 aa14.06□□□□□ -0.16
PCYT1A-215ENST00000488235 LRRFIP2Q9Y608 721 aaKnown RBP14.06□□□□□ -0.16
PCYT1A-215ENST00000488235 PPP1R12BO60237 982 aaPredicted RBP14.05□□□□□ -0.16
PCYT1A-215ENST00000488235 FRAT2O75474 233 aaPredicted RBP14.05□□□□□ -0.16
PCYT1A-215ENST00000488235 CT47B1P0C2W7 299 aaPredicted RBP14.05□□□□□ -0.16
PCYT1A-215ENST00000488235 RGS19P49795 217 aa14.05□□□□□ -0.16
PCYT1A-215ENST00000488235 CNKSR2Q8WXI2 1034 aa14.05□□□□□ -0.16
PCYT1A-215ENST00000488235 SLC10A4Q96EP9 437 aa14.05□□□□□ -0.16
PCYT1A-215ENST00000488235 OTOFQ9HC10 1997 aa14.04□□□□□ -0.16
PCYT1A-215ENST00000488235 IGF2BP3O00425 579 aaKnown RBP eCLIP14.04□□□□□ -0.16
PCYT1A-215ENST00000488235 SUPT20HL1Q3ZLR7 823 aa14.04□□□□□ -0.16
PCYT1A-215ENST00000488235 APOBEC3HQ6NTF7 200 aaKnown RBP14.04□□□□□ -0.16
PCYT1A-215ENST00000488235 CTU1Q7Z7A3 348 aaKnown RBP14.04□□□□□ -0.16
PCYT1A-215ENST00000488235 LPIN2Q92539 896 aa14.04□□□□□ -0.16
PCYT1A-215ENST00000488235 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.04□□□□□ -0.16
PCYT1A-215ENST00000488235 KIF16BQ96L93 1317 aa14.04□□□□□ -0.16
PCYT1A-215ENST00000488235 GPR25O00155 361 aa14.03□□□□□ -0.16
PCYT1A-215ENST00000488235 IFIT1P09914 478 aaKnown RBP14.03□□□□□ -0.16
PCYT1A-215ENST00000488235 SREBF2Q12772 1141 aa14.03□□□□□ -0.16
PCYT1A-215ENST00000488235 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.03□□□□□ -0.16
PCYT1A-215ENST00000488235 API5Q9BZZ5 524 aaKnown RBP14.03□□□□□ -0.16
PCYT1A-215ENST00000488235 BCAR3O75815 825 aa14.02□□□□□ -0.17
PCYT1A-215ENST00000488235 CIAO1O76071 339 aa14.02□□□□□ -0.17
PCYT1A-215ENST00000488235 SLC5A1P13866 664 aa14.02□□□□□ -0.17
PCYT1A-215ENST00000488235 ADORA1P30542 326 aa14.02□□□□□ -0.17
PCYT1A-215ENST00000488235 PHKA1P46020 1223 aa14.02□□□□□ -0.17
PCYT1A-215ENST00000488235 HDLBPQ00341 1268 aaKnown RBP14.02□□□□□ -0.17
PCYT1A-215ENST00000488235 INTS3Q68E01 1043 aaKnown RBP14.02□□□□□ -0.17
PCYT1A-215ENST00000488235 IFNL1Q8IU54 200 aa14.02□□□□□ -0.17
PCYT1A-215ENST00000488235 TBC1D22AQ8WUA7 517 aa14.02□□□□□ -0.17
PCYT1A-215ENST00000488235 TEKT1Q969V4 418 aa14.02□□□□□ -0.17
PCYT1A-215ENST00000488235 ZDHHC15Q96MV8 337 aa14.02□□□□□ -0.17
PCYT1A-215ENST00000488235 PTPN18Q99952 460 aa14.02□□□□□ -0.17
PCYT1A-215ENST00000488235 CFHR5Q9BXR6 569 aa14.02□□□□□ -0.17
PCYT1A-215ENST00000488235 ELP3Q9H9T3 547 aa14.02□□□□□ -0.17
PCYT1A-215ENST00000488235 MANSC4A6NHS7 340 aaPredicted RBP14.01□□□□□ -0.17
PCYT1A-215ENST00000488235 ZBTB48P10074 688 aaPredicted RBP14.01□□□□□ -0.17
PCYT1A-215ENST00000488235 TRIM27P14373 513 aa14.01□□□□□ -0.17
PCYT1A-215ENST00000488235 PRDX5P30044 214 aa14.01□□□□□ -0.17
PCYT1A-215ENST00000488235 IREB2P48200 963 aaKnown RBP14.01□□□□□ -0.17
PCYT1A-215ENST00000488235 SOX10P56693 466 aa14.01□□□□□ -0.17
PCYT1A-215ENST00000488235 CAP1Q01518 475 aa14.01□□□□□ -0.17
PCYT1A-215ENST00000488235 TNFAIP1Q13829 316 aa14.01□□□□□ -0.17
PCYT1A-215ENST00000488235 DIXDC1Q155Q3 683 aa14.01□□□□□ -0.17
PCYT1A-215ENST00000488235 ATP2B3Q16720 1220 aa14.01□□□□□ -0.17
PCYT1A-215ENST00000488235 ANKRD13AQ8IZ07 590 aa14.01□□□□□ -0.17
PCYT1A-215ENST00000488235 OPTNQ96CV9 577 aa14.01□□□□□ -0.17
PCYT1A-215ENST00000488235 VGLL4Q14135 290 aa14□□□□□ -0.17
PCYT1A-215ENST00000488235 NOM1Q5C9Z4 860 aaKnown RBP14□□□□□ -0.17
PCYT1A-215ENST00000488235 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14□□□□□ -0.17
PCYT1A-215ENST00000488235 MS4A4AQ96JQ5 239 aa14□□□□□ -0.17
PCYT1A-215ENST00000488235 COPRSQ9NQ92 184 aa14□□□□□ -0.17
PCYT1A-215ENST00000488235 HPS5Q9UPZ3 1129 aa14□□□□□ -0.17
PCYT1A-215ENST00000488235 LAMB1P07942 1786 aa13.99□□□□□ -0.17
PCYT1A-215ENST00000488235 TESPA1A2RU30 521 aaPredicted RBP13.99□□□□□ -0.17
PCYT1A-215ENST00000488235 UNCXA6NJT0 531 aa13.99□□□□□ -0.17
PCYT1A-215ENST00000488235 TIMM10P62072 90 aa13.99□□□□□ -0.17
PCYT1A-215ENST00000488235 MLLT1Q03111 559 aaPredicted RBP13.99□□□□□ -0.17
PCYT1A-215ENST00000488235 HHIPL2Q6UWX4 724 aa13.99□□□□□ -0.17
PCYT1A-215ENST00000488235 MIER1Q8N108 512 aa13.99□□□□□ -0.17
PCYT1A-215ENST00000488235 ARHGAP45Q92619 1136 aa13.99□□□□□ -0.17
PCYT1A-215ENST00000488235 MRIQ9BWK5 157 aa13.99□□□□□ -0.17
PCYT1A-215ENST00000488235 CEP126Q9P2H0 1117 aa13.99□□□□□ -0.17
PCYT1A-215ENST00000488235 FBXO3Q9UK99 471 aa13.99□□□□□ -0.17
PCYT1A-215ENST00000488235 SUGT1Q9Y2Z0 365 aa13.99□□□□□ -0.17
PCYT1A-215ENST00000488235 DAGLAQ9Y4D2 1042 aa13.99□□□□□ -0.17
PCYT1A-215ENST00000488235 FKTNO75072 461 aa13.98□□□□□ -0.17
PCYT1A-215ENST00000488235 IL15P40933 162 aaPredicted RBP13.98□□□□□ -0.17
PCYT1A-215ENST00000488235 NFIAQ12857 509 aa13.98□□□□□ -0.17
PCYT1A-215ENST00000488235 CRHR2Q13324 411 aa13.98□□□□□ -0.17
PCYT1A-215ENST00000488235 CDC42EP5Q6NZY7 148 aa13.98□□□□□ -0.17
PCYT1A-215ENST00000488235 WDR66Q8TBY9 1149 aa13.98□□□□□ -0.17
PCYT1A-215ENST00000488235 BRI3BPQ8WY22 251 aa13.98□□□□□ -0.17
PCYT1A-215ENST00000488235 ZKSCAN4Q969J2 545 aaPredicted RBP13.98□□□□□ -0.17
PCYT1A-215ENST00000488235 CLUAP1Q96AJ1 413 aa13.98□□□□□ -0.17
PCYT1A-215ENST00000488235 SRGAP3O43295 1099 aa13.97□□□□□ -0.17
PCYT1A-215ENST00000488235 TNNI2P48788 182 aa13.97□□□□□ -0.17
PCYT1A-215ENST00000488235 INHBEP58166 350 aa13.97□□□□□ -0.17
PCYT1A-215ENST00000488235 MAP3K9P80192 1104 aa13.97□□□□□ -0.17
PCYT1A-215ENST00000488235 TFCP2Q12800 502 aa13.97□□□□□ -0.17
PCYT1A-215ENST00000488235 MTX1Q13505 466 aa13.97□□□□□ -0.17
PCYT1A-215ENST00000488235 CCDC102BQ68D86 513 aa13.97□□□□□ -0.17
PCYT1A-215ENST00000488235 ATF7IPQ6VMQ6 1270 aa13.97□□□□□ -0.17
PCYT1A-215ENST00000488235 FAM83AQ86UY5 434 aa13.97□□□□□ -0.17
PCYT1A-215ENST00000488235 ZFPM1Q8IX07 1006 aa13.97□□□□□ -0.17
PCYT1A-215ENST00000488235 FRAT1Q92837 279 aaPredicted RBP13.97□□□□□ -0.17
PCYT1A-215ENST00000488235 SNCAIPQ9Y6H5 919 aa13.97□□□□□ -0.17
PCYT1A-215ENST00000488235 MAST3O60307 1309 aa13.96□□□□□ -0.17
PCYT1A-215ENST00000488235 MYH13Q9UKX3 1938 aa13.96□□□□□ -0.17
PCYT1A-215ENST00000488235 PNMA6EA0A0J9YXQ4 647 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms