RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, human

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCB-208	ENST00000487674	DLGAP5	Q15398	846 aa		10.82	□□□□□ -0.68
PRKCB-208	ENST00000487674	CCDC57	Q2TAC2	916 aa		10.82	□□□□□ -0.68
PRKCB-208	ENST00000487674	LMBR1L	Q6UX01	489 aa		10.82	□□□□□ -0.68
PRKCB-208	ENST00000487674	ARMC9	Q7Z3E5	817 aa		10.82	□□□□□ -0.68
PRKCB-208	ENST00000487674	SPNS2	Q8IVW8	549 aa		10.82	□□□□□ -0.68
PRKCB-208	ENST00000487674	CERS5	Q8N5B7	392 aa		10.82	□□□□□ -0.68
PRKCB-208	ENST00000487674	MTMR14	Q8NCE2	650 aa		10.82	□□□□□ -0.68
PRKCB-208	ENST00000487674	HELB	Q8NG08	1087 aa	Predicted RBP	10.82	□□□□□ -0.68
PRKCB-208	ENST00000487674	SSC5D	A1L4H1	1573 aa		10.82	□□□□□ -0.68
PRKCB-208	ENST00000487674	ALDH1L1	O75891	902 aa		10.81	□□□□□ -0.68
PRKCB-208	ENST00000487674	SREBF2	Q12772	1141 aa		10.81	□□□□□ -0.68
PRKCB-208	ENST00000487674	TAF7L	Q5H9L4	462 aa		10.81	□□□□□ -0.68
PRKCB-208	ENST00000487674	EPHA10	Q5JZY3	1008 aa		10.81	□□□□□ -0.68
PRKCB-208	ENST00000487674	LDHAL6A	Q6ZMR3	332 aa		10.81	□□□□□ -0.68
PRKCB-208	ENST00000487674	CNNM1	Q9NRU3	951 aa		10.81	□□□□□ -0.68
PRKCB-208	ENST00000487674	PPP2R3B	Q9Y5P8	575 aa		10.81	□□□□□ -0.68
PRKCB-208	ENST00000487674	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.8	□□□□□ -0.68
PRKCB-208	ENST00000487674	MYO1B	O43795	1136 aa		10.8	□□□□□ -0.68
PRKCB-208	ENST00000487674	TM4SF4	P48230	202 aa		10.8	□□□□□ -0.68
PRKCB-208	ENST00000487674	PTPN12	Q05209	780 aa	Known RBP	10.8	□□□□□ -0.68
PRKCB-208	ENST00000487674	MMRN1	Q13201	1228 aa		10.8	□□□□□ -0.68
PRKCB-208	ENST00000487674	PDAP1	Q13442	181 aa	Known RBP	10.8	□□□□□ -0.68
PRKCB-208	ENST00000487674	NOM1	Q5C9Z4	860 aa	Known RBP	10.8	□□□□□ -0.68
PRKCB-208	ENST00000487674	LDLRAD1	Q5T700	205 aa		10.8	□□□□□ -0.68
PRKCB-208	ENST00000487674	ZNF594	Q96JF6	807 aa	Predicted RBP	10.8	□□□□□ -0.68
PRKCB-208	ENST00000487674	SRCIN1	Q9C0H9	1055 aa		10.8	□□□□□ -0.68
PRKCB-208	ENST00000487674	DEFB129	Q9H1M3	183 aa		10.8	□□□□□ -0.68
PRKCB-208	ENST00000487674	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.8	□□□□□ -0.68
PRKCB-208	ENST00000487674	ANGEL1	Q9UNK9	670 aa	Known RBP	10.8	□□□□□ -0.68
PRKCB-208	ENST00000487674	PDE4DIP	Q5VU43	2346 aa		10.79	□□□□□ -0.68
PRKCB-208	ENST00000487674		F8W031	263 aa	Predicted RBP	10.79	□□□□□ -0.68
PRKCB-208	ENST00000487674	TBC1D8	O95759	1140 aa		10.79	□□□□□ -0.68
PRKCB-208	ENST00000487674	PRKG1	Q13976	671 aa		10.79	□□□□□ -0.68
PRKCB-208	ENST00000487674	PKN2	Q16513	984 aa	Known RBP	10.79	□□□□□ -0.68
PRKCB-208	ENST00000487674	MAP3K11	Q16584	847 aa		10.79	□□□□□ -0.68
PRKCB-208	ENST00000487674	CFAP100	Q494V2	611 aa		10.79	□□□□□ -0.68
PRKCB-208	ENST00000487674	SLC4A10	Q6U841	1118 aa		10.79	□□□□□ -0.68
PRKCB-208	ENST00000487674	ZNF296	Q8WUU4	475 aa	Predicted RBP	10.79	□□□□□ -0.68
PRKCB-208	ENST00000487674	CFHR5	Q9BXR6	569 aa		10.79	□□□□□ -0.68
PRKCB-208	ENST00000487674	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.79	□□□□□ -0.68
PRKCB-208	ENST00000487674	OTOF	Q9HC10	1997 aa		10.79	□□□□□ -0.68
PRKCB-208	ENST00000487674	FAM205A	Q6ZU69	1335 aa		10.79	□□□□□ -0.68
PRKCB-208	ENST00000487674	CLRN2	A0PK11	232 aa		10.78	□□□□□ -0.68
PRKCB-208	ENST00000487674	UNCX	A6NJT0	531 aa		10.78	□□□□□ -0.68
PRKCB-208	ENST00000487674	GPR25	O00155	361 aa		10.78	□□□□□ -0.68
PRKCB-208	ENST00000487674	UBE4A	Q14139	1066 aa		10.78	□□□□□ -0.68
PRKCB-208	ENST00000487674	SPRYD7	Q5W111	196 aa		10.78	□□□□□ -0.68
PRKCB-208	ENST00000487674	FAM9B	Q8IZU0	186 aa		10.78	□□□□□ -0.68
PRKCB-208	ENST00000487674	JAG2	Q9Y219	1238 aa		10.78	□□□□□ -0.68
PRKCB-208	ENST00000487674	PCDHAC2	Q9Y5I4	1007 aa		10.78	□□□□□ -0.68
PRKCB-208	ENST00000487674	UTY	O14607	1347 aa		10.78	□□□□□ -0.68
PRKCB-208	ENST00000487674	ZNF521	Q96K83	1311 aa		10.78	□□□□□ -0.68
PRKCB-208	ENST00000487674	MANSC4	A6NHS7	340 aa	Predicted RBP	10.77	□□□□□ -0.69
PRKCB-208	ENST00000487674	PPP1R12B	O60237	982 aa	Predicted RBP	10.77	□□□□□ -0.69
PRKCB-208	ENST00000487674	PLIN1	O60240	522 aa		10.77	□□□□□ -0.69
PRKCB-208	ENST00000487674	ALDH1A1	P00352	501 aa		10.77	□□□□□ -0.69
PRKCB-208	ENST00000487674	ZBTB48	P10074	688 aa	Predicted RBP	10.77	□□□□□ -0.69
PRKCB-208	ENST00000487674	SOX10	P56693	466 aa		10.77	□□□□□ -0.69
PRKCB-208	ENST00000487674	SUPT20HL1	Q3ZLR7	823 aa		10.77	□□□□□ -0.69
PRKCB-208	ENST00000487674	MFSD14B	Q5SR56	506 aa		10.77	□□□□□ -0.69
PRKCB-208	ENST00000487674	TDRD7	Q8NHU6	1098 aa	Known RBP	10.77	□□□□□ -0.69
PRKCB-208	ENST00000487674	KAZALD1	Q96I82	304 aa		10.77	□□□□□ -0.69
PRKCB-208	ENST00000487674	SUCLG2	Q96I99	432 aa		10.77	□□□□□ -0.69
PRKCB-208	ENST00000487674	PRMT6	Q96LA8	375 aa	Predicted RBP	10.77	□□□□□ -0.69
PRKCB-208	ENST00000487674	VEZT	Q9HBM0	779 aa		10.77	□□□□□ -0.69
PRKCB-208	ENST00000487674	HPS5	Q9UPZ3	1129 aa		10.77	□□□□□ -0.69
PRKCB-208	ENST00000487674	MROH5	Q6ZUA9	1318 aa		10.77	□□□□□ -0.69
PRKCB-208	ENST00000487674	POTEB3	A0JP26	581 aa		10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	HIBADH	P31937	336 aa	Known RBP	10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	GYG1	P46976	350 aa		10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	RBM5	P52756	815 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	INHBE	P58166	350 aa		10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	TNFAIP1	Q13829	316 aa		10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	RABL6	Q3YEC7	729 aa	Predicted RBP	10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	POTEB	Q6S5H4	581 aa		10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	SLC10A4	Q96EP9	437 aa		10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	WNK4	Q96J92	1243 aa		10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	CLMN	Q96JQ2	1002 aa		10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	BICC1	Q9H694	974 aa	Known RBP	10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	SERPINA10	Q9UK55	444 aa		10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	FZD1	Q9UP38	647 aa		10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	PTPRC	P08575	1304 aa		10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	AOX1	Q06278	1338 aa		10.76	□□□□□ -0.69
PRKCB-208	ENST00000487674	FKTN	O75072	461 aa		10.75	□□□□□ -0.69
PRKCB-208	ENST00000487674	IREB2	P48200	963 aa	Known RBP	10.75	□□□□□ -0.69
PRKCB-208	ENST00000487674	EMP3	P54852	163 aa		10.75	□□□□□ -0.69
PRKCB-208	ENST00000487674	RASA3	Q14644	834 aa		10.75	□□□□□ -0.69
PRKCB-208	ENST00000487674	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.75	□□□□□ -0.69
PRKCB-208	ENST00000487674	FAM84B	Q96KN1	310 aa	Predicted RBP	10.75	□□□□□ -0.69
PRKCB-208	ENST00000487674	PUS3	Q9BZE2	481 aa	Known RBP	10.75	□□□□□ -0.69
PRKCB-208	ENST00000487674	TTF2	Q9UNY4	1162 aa	Known RBP	10.75	□□□□□ -0.69
PRKCB-208	ENST00000487674	RIPOR2	Q9Y4F9	1068 aa		10.75	□□□□□ -0.69
PRKCB-208	ENST00000487674	FBXO46	Q6PJ61	603 aa	Predicted RBP	10.74	□□□□□ -0.69
PRKCB-208	ENST00000487674	ANKRD13A	Q8IZ07	590 aa		10.74	□□□□□ -0.69
PRKCB-208	ENST00000487674	MRPL50	Q8N5N7	158 aa	Known RBP	10.74	□□□□□ -0.69
PRKCB-208	ENST00000487674	ANKRD44	Q8N8A2	993 aa		10.74	□□□□□ -0.69
PRKCB-208	ENST00000487674	ZNF70	Q9UC06	446 aa	Predicted RBP	10.74	□□□□□ -0.69
PRKCB-208	ENST00000487674	MYH13	Q9UKX3	1938 aa		10.74	□□□□□ -0.69
PRKCB-208	ENST00000487674	TNRC18	O15417	2968 aa	Predicted RBP	10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms