RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 MYH16Q9H6N6 1097 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 SERPINA10Q9UK55 444 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 PCDHAC2Q9Y5I4 1007 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 ALPK3Q96L96 1907 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 TTC28Q96AY4 2481 aa9.78□□□□□ -0.84
PDPN-205ENST00000487038 DOCK2Q92608 1830 aa9.78□□□□□ -0.84
PDPN-205ENST00000487038 CAPN2P17655 700 aa9.78□□□□□ -0.84
PDPN-205ENST00000487038 GJA8P48165 433 aa9.78□□□□□ -0.84
PDPN-205ENST00000487038 SNAPC2Q13487 334 aa9.78□□□□□ -0.84
PDPN-205ENST00000487038 CWF19L2Q2TBE0 894 aaKnown RBP9.78□□□□□ -0.84
PDPN-205ENST00000487038 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.78□□□□□ -0.84
PDPN-205ENST00000487038 TRIM47Q96LD4 638 aa9.78□□□□□ -0.84
PDPN-205ENST00000487038 ZNF70Q9UC06 446 aaPredicted RBP9.78□□□□□ -0.84
PDPN-205ENST00000487038 MYBBP1AQ9BQG0 1328 aaKnown RBP9.78□□□□□ -0.84
PDPN-205ENST00000487038 GJB1P08034 283 aa9.77□□□□□ -0.85
PDPN-205ENST00000487038 ZNF853P0CG23 659 aa9.77□□□□□ -0.85
PDPN-205ENST00000487038 GRK4P32298 578 aa9.77□□□□□ -0.85
PDPN-205ENST00000487038 MTFR1Q15390 333 aa9.77□□□□□ -0.85
PDPN-205ENST00000487038 ERO1BQ86YB8 467 aa9.77□□□□□ -0.85
PDPN-205ENST00000487038 CNKSR2Q8WXI2 1034 aa9.77□□□□□ -0.85
PDPN-205ENST00000487038 ARHGAP39Q9C0H5 1083 aa9.77□□□□□ -0.85
PDPN-205ENST00000487038 PRO3102Q9H379 93 aa9.77□□□□□ -0.85
PDPN-205ENST00000487038 TDRD3Q9H7E2 651 aaKnown RBP9.77□□□□□ -0.85
PDPN-205ENST00000487038 BIN2Q9UBW5 565 aaPredicted RBP9.77□□□□□ -0.85
PDPN-205ENST00000487038 SRRDQ9UH36 339 aa9.77□□□□□ -0.85
PDPN-205ENST00000487038 TTF2Q9UNY4 1162 aaKnown RBP9.77□□□□□ -0.85
PDPN-205ENST00000487038 RIPOR2Q9Y4F9 1068 aa9.77□□□□□ -0.85
PDPN-205ENST00000487038 MYPNQ86TC9 1320 aa9.77□□□□□ -0.85
PDPN-205ENST00000487038 IRS2Q9Y4H2 1338 aa9.77□□□□□ -0.85
PDPN-205ENST00000487038 TCP10L2B9ZVM9 353 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 BTBD19C9JJ37 291 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 H7C1W4 665 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 EVI5O60447 810 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 TAF5LO75529 589 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 FARP2O94887 1054 aaPredicted RBP9.76□□□□□ -0.85
PDPN-205ENST00000487038 FMNL1O95466 1100 aaPredicted RBP9.76□□□□□ -0.85
PDPN-205ENST00000487038 CSF1RP07333 972 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 CCL5P13501 91 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 PSMC4P43686 418 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 IFIT5Q13325 482 aaKnown RBP9.76□□□□□ -0.85
PDPN-205ENST00000487038 PPIL2Q13356 520 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 MFSD14BQ5SR56 506 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 TEPSINQ96N21 525 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 TMEM39BQ9GZU3 492 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 RNF208Q9H0X6 261 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 TMOD2Q9NZR1 351 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 JAG2Q9Y219 1238 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 FAM205AQ6ZU69 1335 aa9.76□□□□□ -0.85
PDPN-205ENST00000487038 ZBTB7BO15156 539 aaPredicted RBP9.75□□□□□ -0.85
PDPN-205ENST00000487038 OSBPP22059 807 aa9.75□□□□□ -0.85
PDPN-205ENST00000487038 GCKRQ14397 625 aa9.75□□□□□ -0.85
PDPN-205ENST00000487038 TAF7LQ5H9L4 462 aa9.75□□□□□ -0.85
PDPN-205ENST00000487038 DCAF15Q66K64 600 aa9.75□□□□□ -0.85
PDPN-205ENST00000487038 UBE2Q1Q7Z7E8 422 aa9.75□□□□□ -0.85
PDPN-205ENST00000487038 DZIP1LQ8IYY4 767 aaKnown RBP9.75□□□□□ -0.85
PDPN-205ENST00000487038 SLAIN1Q8ND83 568 aa9.75□□□□□ -0.85
PDPN-205ENST00000487038 WRNIP1Q96S55 665 aa9.75□□□□□ -0.85
PDPN-205ENST00000487038 CHMP3Q9Y3E7 222 aa9.75□□□□□ -0.85
PDPN-205ENST00000487038 SNCAIPQ9Y6H5 919 aa9.75□□□□□ -0.85
PDPN-205ENST00000487038 PTPRFP10586 1907 aa9.75□□□□□ -0.85
PDPN-205ENST00000487038 AOX1Q06278 1338 aa9.75□□□□□ -0.85
PDPN-205ENST00000487038 RPAP1Q9BWH6 1393 aaPredicted RBP9.75□□□□□ -0.85
PDPN-205ENST00000487038 DDX60LQ5H9U9 1706 aaKnown RBP9.74□□□□□ -0.85
PDPN-205ENST00000487038 IRF6O14896 467 aa9.74□□□□□ -0.85
PDPN-205ENST00000487038 ECM2O94769 699 aaPredicted RBP9.74□□□□□ -0.85
PDPN-205ENST00000487038 CRKP46108 304 aa9.74□□□□□ -0.85
PDPN-205ENST00000487038 FCGRTP55899 365 aa9.74□□□□□ -0.85
PDPN-205ENST00000487038 PPATQ06203 517 aa9.74□□□□□ -0.85
PDPN-205ENST00000487038 GPR153Q6NV75 609 aa9.74□□□□□ -0.85
PDPN-205ENST00000487038 C17orf99Q6UX52 265 aa9.74□□□□□ -0.85
PDPN-205ENST00000487038 ANKRD23Q86SG2 305 aa9.74□□□□□ -0.85
PDPN-205ENST00000487038 C8orf58Q8NAV2 365 aa9.74□□□□□ -0.85
PDPN-205ENST00000487038 U2AF1L4Q8WU68 220 aaKnown RBP9.74□□□□□ -0.85
PDPN-205ENST00000487038 DOCK1Q14185 1865 aa9.74□□□□□ -0.85
PDPN-205ENST00000487038 SNAP23O00161 211 aa9.73□□□□□ -0.85
PDPN-205ENST00000487038 CCDC57Q2TAC2 916 aa9.73□□□□□ -0.85
PDPN-205ENST00000487038 FAM83AQ86UY5 434 aa9.73□□□□□ -0.85
PDPN-205ENST00000487038 CDAN1Q8IWY9 1227 aa9.73□□□□□ -0.85
PDPN-205ENST00000487038 LRCH3Q96II8 777 aa9.73□□□□□ -0.85
PDPN-205ENST00000487038 PARK7Q99497 189 aaKnown RBP9.73□□□□□ -0.85
PDPN-205ENST00000487038 CNNM1Q9NRU3 951 aa9.73□□□□□ -0.85
PDPN-205ENST00000487038 CPA4Q9UI42 421 aa9.73□□□□□ -0.85
PDPN-205ENST00000487038 ADAMTS8Q9UP79 889 aa9.73□□□□□ -0.85
PDPN-205ENST00000487038 PDHXO00330 501 aa9.72□□□□□ -0.85
PDPN-205ENST00000487038 PLIN1O60240 522 aa9.72□□□□□ -0.85
PDPN-205ENST00000487038 SGPL1O95470 568 aa9.72□□□□□ -0.85
PDPN-205ENST00000487038 HIBADHP31937 336 aaKnown RBP9.72□□□□□ -0.85
PDPN-205ENST00000487038 CASP7P55210 303 aa9.72□□□□□ -0.85
PDPN-205ENST00000487038 HDLBPQ00341 1268 aaKnown RBP9.72□□□□□ -0.85
PDPN-205ENST00000487038 FKBP5Q13451 457 aaPredicted RBP9.72□□□□□ -0.85
PDPN-205ENST00000487038 LDHAL6AQ6ZMR3 332 aa9.72□□□□□ -0.85
PDPN-205ENST00000487038 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.72□□□□□ -0.85
PDPN-205ENST00000487038 LINS1Q8NG48 757 aa9.72□□□□□ -0.85
PDPN-205ENST00000487038 TDRD7Q8NHU6 1098 aaKnown RBP9.72□□□□□ -0.85
PDPN-205ENST00000487038 TBC1D22AQ8WUA7 517 aa9.72□□□□□ -0.85
PDPN-205ENST00000487038 ZKSCAN4Q969J2 545 aaPredicted RBP9.72□□□□□ -0.85
PDPN-205ENST00000487038 TEKT1Q969V4 418 aa9.72□□□□□ -0.85
PDPN-205ENST00000487038 ZNF341Q9BYN7 854 aa9.72□□□□□ -0.85
PDPN-205ENST00000487038 MAST3O60307 1309 aa9.72□□□□□ -0.85
PDPN-205ENST00000487038 ADGRA2Q96PE1 1338 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms