RNA–Protein interactions for RNA: ENST00000486425.1

MUC4-222, Transcript of mucin 4, cell surface associated, human

TSL 4

Gene MUC4, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC4-222	ENST00000486425	TTC41P	Q6P2S7	1318 aa		9.11	□□□□□ -0.95
MUC4-222	ENST00000486425	TNRC6C	Q9HCJ0	1690 aa	Known RBP	9.11	□□□□□ -0.95
MUC4-222	ENST00000486425		A0A087WZG4	1122 aa		9.11	□□□□□ -0.95
MUC4-222	ENST00000486425	MX1	P20591	662 aa		9.11	□□□□□ -0.95
MUC4-222	ENST00000486425	CRKL	P46109	303 aa	Known RBP	9.11	□□□□□ -0.95
MUC4-222	ENST00000486425	FOXO4	P98177	505 aa		9.11	□□□□□ -0.95
MUC4-222	ENST00000486425	EPHA10	Q5JZY3	1008 aa		9.11	□□□□□ -0.95
MUC4-222	ENST00000486425	UBE3B	Q7Z3V4	1068 aa		9.11	□□□□□ -0.95
MUC4-222	ENST00000486425	ACSBG1	Q96GR2	724 aa		9.11	□□□□□ -0.95
MUC4-222	ENST00000486425	TBC1D32	Q96NH3	1257 aa		9.11	□□□□□ -0.95
MUC4-222	ENST00000486425	ZBTB3	Q9H5J0	574 aa		9.11	□□□□□ -0.95
MUC4-222	ENST00000486425	LIMD1	Q9UGP4	676 aa		9.11	□□□□□ -0.95
MUC4-222	ENST00000486425	ZNF609	O15014	1411 aa		9.11	□□□□□ -0.95
MUC4-222	ENST00000486425	CCDC88A	Q3V6T2	1871 aa		9.11	□□□□□ -0.95
MUC4-222	ENST00000486425	ANKRD31	Q8N7Z5	1873 aa		9.11	□□□□□ -0.95
MUC4-222	ENST00000486425	WNT7A	O00755	349 aa		9.1	□□□□□ -0.95
MUC4-222	ENST00000486425	SMARCA5	O60264	1052 aa	Predicted RBP	9.1	□□□□□ -0.95
MUC4-222	ENST00000486425	CDC45	O75419	566 aa		9.1	□□□□□ -0.95
MUC4-222	ENST00000486425	SURF6	O75683	361 aa	Known RBP	9.1	□□□□□ -0.95
MUC4-222	ENST00000486425	CCNYL3	P0C7X3	344 aa		9.1	□□□□□ -0.95
MUC4-222	ENST00000486425	PKDCC	Q504Y2	493 aa		9.1	□□□□□ -0.95
MUC4-222	ENST00000486425	PTCRA	Q6ISU1	281 aa	Predicted RBP	9.1	□□□□□ -0.95
MUC4-222	ENST00000486425	ZNF34	Q8IZ26	560 aa		9.1	□□□□□ -0.95
MUC4-222	ENST00000486425	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	9.1	□□□□□ -0.95
MUC4-222	ENST00000486425	OTUD7A	Q8TE49	926 aa	Predicted RBP	9.1	□□□□□ -0.95
MUC4-222	ENST00000486425	TOR4A	Q9NXH8	423 aa		9.1	□□□□□ -0.95
MUC4-222	ENST00000486425	RIC1	Q4ADV7	1423 aa		9.1	□□□□□ -0.95
MUC4-222	ENST00000486425	RTL9	Q8NET4	1388 aa		9.1	□□□□□ -0.95
MUC4-222	ENST00000486425	GOLGB1	Q14789	3259 aa	Known RBP	9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	ATP5J2-PTCD1	G3V325	749 aa		9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	SASH1	O94885	1247 aa		9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	CAMTA2	O94983	1202 aa		9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	CSF1R	P07333	972 aa		9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	RBM25	P49756	843 aa	Known RBP	9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	WNT7B	P56706	349 aa		9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	PTPN12	Q05209	780 aa	Known RBP	9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	TXNRD1	Q16881	649 aa		9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	CLEC4G	Q6UXB4	293 aa		9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	NLRP10	Q86W26	655 aa		9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	DZIP3	Q86Y13	1208 aa	Known RBP	9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	C16orf71	Q8IYS4	520 aa	Predicted RBP	9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	ZNF784	Q8NCA9	323 aa	Predicted RBP	9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	PI4K2B	Q8TCG2	481 aa		9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	PDGFD	Q9GZP0	370 aa	Predicted RBP	9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	KDM4C	Q9H3R0	1056 aa		9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	GPBP1L1	Q9HC44	474 aa	Predicted RBP	9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	GPR108	Q9NPR9	543 aa		9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	EVA1B	Q9NVM1	165 aa		9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	RFX7	Q2KHR2	1363 aa		9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	MAST2	Q6P0Q8	1798 aa		9.09	□□□□□ -0.95
MUC4-222	ENST00000486425	UBN2	Q6ZU65	1347 aa		9.08	□□□□□ -0.96
MUC4-222	ENST00000486425	CFAP99	D6REC4	459 aa		9.08	□□□□□ -0.96
MUC4-222	ENST00000486425	EPB41L2	O43491	1005 aa	Known RBP	9.08	□□□□□ -0.96
MUC4-222	ENST00000486425	CIAO1	O76071	339 aa		9.08	□□□□□ -0.96
MUC4-222	ENST00000486425	SDS	P20132	328 aa		9.08	□□□□□ -0.96
MUC4-222	ENST00000486425	SLC15A2	Q16348	729 aa		9.08	□□□□□ -0.96
MUC4-222	ENST00000486425	HLF	Q16534	295 aa		9.08	□□□□□ -0.96
MUC4-222	ENST00000486425	PARP10	Q53GL7	1025 aa		9.08	□□□□□ -0.96
MUC4-222	ENST00000486425	TBC1D9	Q6ZT07	1266 aa		9.08	□□□□□ -0.96
MUC4-222	ENST00000486425	LINC00116	Q8NCU8	138 aa		9.08	□□□□□ -0.96
MUC4-222	ENST00000486425	DDRGK1	Q96HY6	314 aa		9.08	□□□□□ -0.96
MUC4-222	ENST00000486425	IPO9	Q96P70	1041 aa	Known RBP	9.08	□□□□□ -0.96
MUC4-222	ENST00000486425	UPF2	Q9HAU5	1272 aa	Known RBP	9.08	□□□□□ -0.96
MUC4-222	ENST00000486425	ABCC12	Q96J65	1359 aa		9.08	□□□□□ -0.96
MUC4-222	ENST00000486425	DLEC1	Q9Y238	1755 aa		9.07	□□□□□ -0.96
MUC4-222	ENST00000486425	CACNA1S	Q13698	1873 aa		9.07	□□□□□ -0.96
MUC4-222	ENST00000486425	FAM187A	A6NFU0	413 aa		9.07	□□□□□ -0.96
MUC4-222	ENST00000486425	LILRB3	O75022	631 aa		9.07	□□□□□ -0.96
MUC4-222	ENST00000486425	HMGB2	P26583	209 aa	Known RBP	9.07	□□□□□ -0.96
MUC4-222	ENST00000486425	SKOR1	P84550	965 aa		9.07	□□□□□ -0.96
MUC4-222	ENST00000486425	LYPD8	Q6UX82	237 aa		9.07	□□□□□ -0.96
MUC4-222	ENST00000486425	TICAM2	Q86XR7	235 aa		9.07	□□□□□ -0.96
MUC4-222	ENST00000486425	CYP4X1	Q8N118	509 aa		9.07	□□□□□ -0.96
MUC4-222	ENST00000486425	CLASRP	Q8N2M8	674 aa	Known RBP	9.07	□□□□□ -0.96
MUC4-222	ENST00000486425	PA2G4	Q9UQ80	394 aa	Known RBP	9.07	□□□□□ -0.96
MUC4-222	ENST00000486425	LTBP1	Q14766	1721 aa		9.07	□□□□□ -0.96
MUC4-222	ENST00000486425	ERC2	O15083	957 aa		9.06	□□□□□ -0.96
MUC4-222	ENST00000486425	GLRX3	O76003	335 aa	Known RBP	9.06	□□□□□ -0.96
MUC4-222	ENST00000486425	CLK2	P49760	499 aa	Known RBP	9.06	□□□□□ -0.96
MUC4-222	ENST00000486425	KCNH2	Q12809	1159 aa		9.06	□□□□□ -0.96
MUC4-222	ENST00000486425	G3BP1	Q13283	466 aa	Known RBP eCLIP	9.06	□□□□□ -0.96
MUC4-222	ENST00000486425	QPCT	Q16769	361 aa		9.06	□□□□□ -0.96
MUC4-222	ENST00000486425	CSPP1	Q1MSJ5	1256 aa		9.06	□□□□□ -0.96
MUC4-222	ENST00000486425	LMBR1L	Q6UX01	489 aa		9.06	□□□□□ -0.96
MUC4-222	ENST00000486425	ZNF652	Q9Y2D9	606 aa		9.06	□□□□□ -0.96
MUC4-222	ENST00000486425	COL4A1	P02462	1669 aa		9.06	□□□□□ -0.96
MUC4-222	ENST00000486425	APBB1	O00213	710 aa		9.05	□□□□□ -0.96
MUC4-222	ENST00000486425	PDE8A	O60658	829 aa		9.05	□□□□□ -0.96
MUC4-222	ENST00000486425	RPS6KA4	O75676	772 aa		9.05	□□□□□ -0.96
MUC4-222	ENST00000486425	NTSR2	O95665	410 aa		9.05	□□□□□ -0.96
MUC4-222	ENST00000486425	HSP90B1	P14625	803 aa	Known RBP	9.05	□□□□□ -0.96
MUC4-222	ENST00000486425	IL15	P40933	162 aa	Predicted RBP	9.05	□□□□□ -0.96
MUC4-222	ENST00000486425	CTSW	P56202	376 aa		9.05	□□□□□ -0.96
MUC4-222	ENST00000486425	C1QTNF8	P60827	252 aa		9.05	□□□□□ -0.96
MUC4-222	ENST00000486425	SLC27A3	Q5K4L6	730 aa		9.05	□□□□□ -0.96
MUC4-222	ENST00000486425	CASC1	Q6TDU7	716 aa		9.05	□□□□□ -0.96
MUC4-222	ENST00000486425	ATG9A	Q7Z3C6	839 aa		9.05	□□□□□ -0.96
MUC4-222	ENST00000486425	SNIP1	Q8TAD8	396 aa	Known RBP	9.05	□□□□□ -0.96
MUC4-222	ENST00000486425	IL17RA	Q96F46	866 aa		9.05	□□□□□ -0.96
MUC4-222	ENST00000486425	GPATCH3	Q96I76	525 aa		9.05	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms