RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 PI4K2BQ8TCG2 481 aa24.27■■□□□ 1.48
COL6A2-208ENST00000485591 BOLA2Q9H3K6 86 aa24.27■■□□□ 1.48
COL6A2-208ENST00000485591 ABCF2Q9UG63 623 aa24.27■■□□□ 1.48
COL6A2-208ENST00000485591 GLRX3O76003 335 aaKnown RBP24.26■■□□□ 1.47
COL6A2-208ENST00000485591 TBC1D9Q6ZT07 1266 aa24.26■■□□□ 1.47
COL6A2-208ENST00000485591 NDUFB9Q9Y6M9 179 aa24.26■■□□□ 1.47
COL6A2-208ENST00000485591 AOX1Q06278 1338 aa24.26■■□□□ 1.47
COL6A2-208ENST00000485591 IGSF3O75054 1194 aa24.25■■□□□ 1.47
COL6A2-208ENST00000485591 HDLBPQ00341 1268 aaKnown RBP24.25■■□□□ 1.47
COL6A2-208ENST00000485591 ERICH6Q7L0X2 663 aa24.25■■□□□ 1.47
COL6A2-208ENST00000485591 DNAJC2Q99543 621 aaKnown RBP24.25■■□□□ 1.47
COL6A2-208ENST00000485591 MYOZ2Q9NPC6 264 aa24.25■■□□□ 1.47
COL6A2-208ENST00000485591 PDE4AP27815 886 aa24.24■■□□□ 1.47
COL6A2-208ENST00000485591 TTF1Q15361 905 aaPredicted RBP24.24■■□□□ 1.47
COL6A2-208ENST00000485591 KIF4BQ2VIQ3 1234 aa24.24■■□□□ 1.47
COL6A2-208ENST00000485591 USP50Q70EL3 339 aaPredicted RBP24.24■■□□□ 1.47
COL6A2-208ENST00000485591 SAMD7Q7Z3H4 446 aa24.24■■□□□ 1.47
COL6A2-208ENST00000485591 PNMA8AQ86V59 439 aaPredicted RBP24.24■■□□□ 1.47
COL6A2-208ENST00000485591 PLEKHM2Q8IWE5 1019 aa24.24■■□□□ 1.47
COL6A2-208ENST00000485591 OSBPL3Q9H4L5 887 aa24.24■■□□□ 1.47
COL6A2-208ENST00000485591 ANTXR1Q9H6X2 564 aa24.24■■□□□ 1.47
COL6A2-208ENST00000485591 PIH1D3Q9NQM4 214 aaKnown RBP24.24■■□□□ 1.47
COL6A2-208ENST00000485591 PAG1Q9NWQ8 432 aa24.24■■□□□ 1.47
COL6A2-208ENST00000485591 SERPINA10Q9UK55 444 aa24.24■■□□□ 1.47
COL6A2-208ENST00000485591 GOLIM4O00461 696 aa24.23■■□□□ 1.47
COL6A2-208ENST00000485591 TBC1D10BQ4KMP7 808 aaPredicted RBP24.23■■□□□ 1.47
COL6A2-208ENST00000485591 MTMR14Q8NCE2 650 aa24.23■■□□□ 1.47
COL6A2-208ENST00000485591 TRPM4Q8TD43 1214 aa24.23■■□□□ 1.47
COL6A2-208ENST00000485591 MRIQ9BWK5 157 aa24.23■■□□□ 1.47
COL6A2-208ENST00000485591 LRP2BPQ9P2M1 347 aa24.23■■□□□ 1.47
COL6A2-208ENST00000485591 AK9Q5TCS8 1911 aa24.22■■□□□ 1.47
COL6A2-208ENST00000485591 KIF3CO14782 793 aa24.22■■□□□ 1.47
COL6A2-208ENST00000485591 EGFRP00533 1210 aa24.22■■□□□ 1.47
COL6A2-208ENST00000485591 DZIP1Q86YF9 867 aaKnown RBP24.22■■□□□ 1.47
COL6A2-208ENST00000485591 CRKP46108 304 aa24.21■■□□□ 1.47
COL6A2-208ENST00000485591 MECOMQ03112 1051 aa24.21■■□□□ 1.47
COL6A2-208ENST00000485591 TEKT1Q969V4 418 aa24.21■■□□□ 1.47
COL6A2-208ENST00000485591 EDC3Q96F86 508 aaKnown RBP24.21■■□□□ 1.47
COL6A2-208ENST00000485591 ZBED3Q96IU2 234 aaPredicted RBP24.21■■□□□ 1.47
COL6A2-208ENST00000485591 RAI14Q9P0K7 980 aa24.21■■□□□ 1.47
COL6A2-208ENST00000485591 HIRAP54198 1017 aaPredicted RBP24.2■■□□□ 1.46
COL6A2-208ENST00000485591 CFAP100Q494V2 611 aa24.2■■□□□ 1.46
COL6A2-208ENST00000485591 HHIPL2Q6UWX4 724 aa24.2■■□□□ 1.46
COL6A2-208ENST00000485591 NSUN4Q96CB9 384 aaKnown RBP24.2■■□□□ 1.46
COL6A2-208ENST00000485591 IDH1O75874 414 aaKnown RBP24.19■■□□□ 1.46
COL6A2-208ENST00000485591 DLGAP5Q15398 846 aa24.19■■□□□ 1.46
COL6A2-208ENST00000485591 DIXDC1Q155Q3 683 aa24.19■■□□□ 1.46
COL6A2-208ENST00000485591 EAPPQ56P03 285 aaPredicted RBP24.19■■□□□ 1.46
COL6A2-208ENST00000485591 RBM26Q5T8P6 1007 aaKnown RBP24.19■■□□□ 1.46
COL6A2-208ENST00000485591 SLF2Q8IX21 1173 aa24.19■■□□□ 1.46
COL6A2-208ENST00000485591 ZNF384Q8TF68 577 aa24.19■■□□□ 1.46
COL6A2-208ENST00000485591 GAKO14976 1311 aa24.18■■□□□ 1.46
COL6A2-208ENST00000485591 SPDYE2BA6NHP3 402 aa24.18■■□□□ 1.46
COL6A2-208ENST00000485591 WNT10BO00744 389 aa24.18■■□□□ 1.46
COL6A2-208ENST00000485591 SPDYE6P0CI01 402 aa24.18■■□□□ 1.46
COL6A2-208ENST00000485591 RBM5P52756 815 aaKnown RBP eCLIP24.18■■□□□ 1.46
COL6A2-208ENST00000485591 GSTO1P78417 241 aa24.18■■□□□ 1.46
COL6A2-208ENST00000485591 MAP3K12Q12852 859 aa24.18■■□□□ 1.46
COL6A2-208ENST00000485591 TMED8Q6PL24 325 aaPredicted RBP24.18■■□□□ 1.46
COL6A2-208ENST00000485591 ZDHHC15Q96MV8 337 aa24.18■■□□□ 1.46
COL6A2-208ENST00000485591 MROH7-TTC4A0A0A0MT08 1334 aa24.17■■□□□ 1.46
COL6A2-208ENST00000485591 LDHDQ86WU2 507 aa24.17■■□□□ 1.46
COL6A2-208ENST00000485591 DAGLAQ9Y4D2 1042 aa24.17■■□□□ 1.46
COL6A2-208ENST00000485591 PCDHAC2Q9Y5I4 1007 aa24.17■■□□□ 1.46
COL6A2-208ENST00000485591 POTEIP0CG38 1075 aa24.16■■□□□ 1.46
COL6A2-208ENST00000485591 POTEJP0CG39 1038 aa24.16■■□□□ 1.46
COL6A2-208ENST00000485591 NBPF9Q3BBW0 867 aa24.16■■□□□ 1.46
COL6A2-208ENST00000485591 NAA16Q6N069 864 aaPredicted RBP24.16■■□□□ 1.46
COL6A2-208ENST00000485591 KBTBD3Q8NAB2 608 aa24.16■■□□□ 1.46
COL6A2-208ENST00000485591 ZC3H15Q8WU90 426 aaKnown RBP24.16■■□□□ 1.46
COL6A2-208ENST00000485591 FAM163AQ96GL9 167 aaPredicted RBP24.16■■□□□ 1.46
COL6A2-208ENST00000485591 PRMT6Q96LA8 375 aaPredicted RBP24.16■■□□□ 1.46
COL6A2-208ENST00000485591 POLR2AP24928 1970 aaKnown RBP24.16■■□□□ 1.46
COL6A2-208ENST00000485591 MAP4K4O95819 1239 aaPredicted RBP24.15■■□□□ 1.46
COL6A2-208ENST00000485591 LDHCP07864 332 aa24.15■■□□□ 1.46
COL6A2-208ENST00000485591 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.15■■□□□ 1.46
COL6A2-208ENST00000485591 PGAP2Q9UHJ9 254 aa24.15■■□□□ 1.46
COL6A2-208ENST00000485591 APOBEC3HQ6NTF7 200 aaKnown RBP24.14■■□□□ 1.45
COL6A2-208ENST00000485591 MAGEB6Q8N7X4 407 aa24.14■■□□□ 1.45
COL6A2-208ENST00000485591 CDK5RAP2Q96SN8 1893 aa24.13■■□□□ 1.45
COL6A2-208ENST00000485591 MYO1BO43795 1136 aa24.13■■□□□ 1.45
COL6A2-208ENST00000485591 PDE6AP16499 860 aa24.13■■□□□ 1.45
COL6A2-208ENST00000485591 GGA3Q9NZ52 723 aa24.13■■□□□ 1.45
COL6A2-208ENST00000485591 CLEC11AQ9Y240 323 aa24.13■■□□□ 1.45
COL6A2-208ENST00000485591 ASTN2O75129 1339 aaPredicted RBP24.12■■□□□ 1.45
COL6A2-208ENST00000485591 PITPNM2Q9BZ72 1349 aa24.12■■□□□ 1.45
COL6A2-208ENST00000485591 FOCADQ5VW36 1801 aa24.12■■□□□ 1.45
COL6A2-208ENST00000485591 TOMM70O94826 608 aa24.12■■□□□ 1.45
COL6A2-208ENST00000485591 TTC22Q5TAA0 569 aa24.12■■□□□ 1.45
COL6A2-208ENST00000485591 SLC9C2Q5TAH2 1124 aa24.12■■□□□ 1.45
COL6A2-208ENST00000485591 EVI5LQ96CN4 794 aa24.12■■□□□ 1.45
COL6A2-208ENST00000485591 GPR75-ASB3A0A0A6YYF3 556 aa24.11■■□□□ 1.45
COL6A2-208ENST00000485591 CYP7A1P22680 504 aa24.11■■□□□ 1.45
COL6A2-208ENST00000485591 ADD2P35612 726 aa24.11■■□□□ 1.45
COL6A2-208ENST00000485591 SPDYE2Q495Y8 402 aa24.11■■□□□ 1.45
COL6A2-208ENST00000485591 ANGEL2Q5VTE6 544 aaKnown RBP24.11■■□□□ 1.45
COL6A2-208ENST00000485591 ZSCAN25Q6NSZ9 544 aa24.11■■□□□ 1.45
COL6A2-208ENST00000485591 ADGRA1Q86SQ6 560 aa24.11■■□□□ 1.45
COL6A2-208ENST00000485591 RBM46Q8TBY0 533 aaKnown RBP24.11■■□□□ 1.45
COL6A2-208ENST00000485591 TDRD3Q9H7E2 651 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms