RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 PSME4Q14997 1843 aa10.37□□□□□ -0.75
ERCC8-205ENST00000477893 WDR33Q9C0J8 1336 aaKnown RBP10.37□□□□□ -0.75
ERCC8-205ENST00000477893 IRS2Q9Y4H2 1338 aa10.37□□□□□ -0.75
ERCC8-205ENST00000477893 RASSF10A6NK89 507 aa10.37□□□□□ -0.75
ERCC8-205ENST00000477893 NBPF9Q3BBW0 867 aa10.37□□□□□ -0.75
ERCC8-205ENST00000477893 STRIP1Q5VSL9 837 aa10.37□□□□□ -0.75
ERCC8-205ENST00000477893 OGFOD1Q8N543 542 aa10.37□□□□□ -0.75
ERCC8-205ENST00000477893 CAPNS2Q96L46 248 aa10.37□□□□□ -0.75
ERCC8-205ENST00000477893 MEIS3Q99687 375 aa10.37□□□□□ -0.75
ERCC8-205ENST00000477893 LRRFIP2Q9Y608 721 aaKnown RBP10.37□□□□□ -0.75
ERCC8-205ENST00000477893 TLL2Q9Y6L7 1015 aa10.37□□□□□ -0.75
ERCC8-205ENST00000477893 MROH5Q6ZUA9 1318 aa10.36□□□□□ -0.75
ERCC8-205ENST00000477893 MYO3BQ8WXR4 1341 aa10.36□□□□□ -0.75
ERCC8-205ENST00000477893 ZNF609O15014 1411 aa10.36□□□□□ -0.75
ERCC8-205ENST00000477893 ZNF646O15015 1829 aaPredicted RBP10.36□□□□□ -0.75
ERCC8-205ENST00000477893 AOC2O75106 756 aa10.36□□□□□ -0.75
ERCC8-205ENST00000477893 CHAF1AQ13111 956 aaPredicted RBP10.36□□□□□ -0.75
ERCC8-205ENST00000477893 PRAMEF18Q5VWM3 479 aa10.36□□□□□ -0.75
ERCC8-205ENST00000477893 VPS37DQ86XT2 251 aa10.36□□□□□ -0.75
ERCC8-205ENST00000477893 CERS5Q8N5B7 392 aa10.36□□□□□ -0.75
ERCC8-205ENST00000477893 AIDAQ96BJ3 306 aa10.36□□□□□ -0.75
ERCC8-205ENST00000477893 CDCA5Q96FF9 252 aa10.36□□□□□ -0.75
ERCC8-205ENST00000477893 RIPOR2Q9Y4F9 1068 aa10.36□□□□□ -0.75
ERCC8-205ENST00000477893 TRPM7Q96QT4 1865 aa10.36□□□□□ -0.75
ERCC8-205ENST00000477893 FRAT2O75474 233 aaPredicted RBP10.35□□□□□ -0.75
ERCC8-205ENST00000477893 TRIM27P14373 513 aa10.35□□□□□ -0.75
ERCC8-205ENST00000477893 HIBADHP31937 336 aaKnown RBP10.35□□□□□ -0.75
ERCC8-205ENST00000477893 HUNKP57058 714 aa10.35□□□□□ -0.75
ERCC8-205ENST00000477893 UBE4AQ14139 1066 aa10.35□□□□□ -0.75
ERCC8-205ENST00000477893 SAPCD2Q86UD0 394 aa10.35□□□□□ -0.75
ERCC8-205ENST00000477893 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.35□□□□□ -0.75
ERCC8-205ENST00000477893 HDAC9Q9UKV0 1011 aa10.35□□□□□ -0.75
ERCC8-205ENST00000477893 PA2G4Q9UQ80 394 aaKnown RBP10.35□□□□□ -0.75
ERCC8-205ENST00000477893 PCDHAC2Q9Y5I4 1007 aa10.35□□□□□ -0.75
ERCC8-205ENST00000477893 WNT10BO00744 389 aa10.34□□□□□ -0.75
ERCC8-205ENST00000477893 FOXN1O15353 648 aa10.34□□□□□ -0.75
ERCC8-205ENST00000477893 IPO8O15397 1037 aaKnown RBP10.34□□□□□ -0.75
ERCC8-205ENST00000477893 IL1R1P14778 569 aa10.34□□□□□ -0.75
ERCC8-205ENST00000477893 ECE1P42892 770 aa10.34□□□□□ -0.75
ERCC8-205ENST00000477893 RBM5P52756 815 aaKnown RBP eCLIP10.34□□□□□ -0.75
ERCC8-205ENST00000477893 TTLL12Q14166 644 aaPredicted RBP10.34□□□□□ -0.75
ERCC8-205ENST00000477893 COL13A1Q5TAT6 717 aaPredicted RBP10.34□□□□□ -0.75
ERCC8-205ENST00000477893 ATF7IPQ6VMQ6 1270 aa10.34□□□□□ -0.75
ERCC8-205ENST00000477893 C15orf52Q6ZUT6 534 aaKnown RBP10.34□□□□□ -0.75
ERCC8-205ENST00000477893 FAM84BQ96KN1 310 aaPredicted RBP10.34□□□□□ -0.75
ERCC8-205ENST00000477893 GBA2Q9HCG7 927 aaPredicted RBP10.34□□□□□ -0.75
ERCC8-205ENST00000477893 ZBED9Q6R2W3 1325 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 CLRN2A0PK11 232 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 EYA2O00167 538 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 PDE8BO95263 885 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 RFX5P48382 616 aaPredicted RBP10.33□□□□□ -0.76
ERCC8-205ENST00000477893 BCAMP50895 628 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 BRPF1P55201 1214 aaPredicted RBP10.33□□□□□ -0.76
ERCC8-205ENST00000477893 PTPN12Q05209 780 aaKnown RBP10.33□□□□□ -0.76
ERCC8-205ENST00000477893 PRKG1Q13976 671 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 PUM3Q15397 648 aaKnown RBP10.33□□□□□ -0.76
ERCC8-205ENST00000477893 DLGAP5Q15398 846 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 CFAP100Q494V2 611 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 CAVIN4Q5BKX8 364 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 MFSD14BQ5SR56 506 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 ZKSCAN2Q63HK3 967 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 MOB2Q70IA6 237 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 FTSJ3Q8IY81 847 aaKnown RBP10.33□□□□□ -0.76
ERCC8-205ENST00000477893 TMEM57Q8N5G2 664 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 VGLL2Q8N8G2 317 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 C2orf69Q8N8R5 385 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 VEZTQ9HBM0 779 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 HCSTQ9UBK5 93 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 TSKSQ9UJT2 592 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 AOX1Q06278 1338 aa10.33□□□□□ -0.76
ERCC8-205ENST00000477893 SRGAP3O43295 1099 aa10.32□□□□□ -0.76
ERCC8-205ENST00000477893 IFIT1P09914 478 aaKnown RBP10.32□□□□□ -0.76
ERCC8-205ENST00000477893 INTS3Q68E01 1043 aaKnown RBP10.32□□□□□ -0.76
ERCC8-205ENST00000477893 POTEEQ6S8J3 1075 aa10.32□□□□□ -0.76
ERCC8-205ENST00000477893 ARHGAP45Q92619 1136 aa10.32□□□□□ -0.76
ERCC8-205ENST00000477893 C1orf115Q9H7X2 142 aa10.32□□□□□ -0.76
ERCC8-205ENST00000477893 TTF2Q9UNY4 1162 aaKnown RBP10.32□□□□□ -0.76
ERCC8-205ENST00000477893 GNAI3P08754 354 aa10.31□□□□□ -0.76
ERCC8-205ENST00000477893 NUDT7P0C024 238 aa10.31□□□□□ -0.76
ERCC8-205ENST00000477893 SLC5A1P13866 664 aa10.31□□□□□ -0.76
ERCC8-205ENST00000477893 ZNF157P51786 506 aaPredicted RBP10.31□□□□□ -0.76
ERCC8-205ENST00000477893 GRIK5Q16478 980 aa10.31□□□□□ -0.76
ERCC8-205ENST00000477893 ATP2B3Q16720 1220 aa10.31□□□□□ -0.76
ERCC8-205ENST00000477893 RGMBQ6NW40 437 aa10.31□□□□□ -0.76
ERCC8-205ENST00000477893 ATG9AQ7Z3C6 839 aa10.31□□□□□ -0.76
ERCC8-205ENST00000477893 ITPRIPQ8IWB1 547 aa10.31□□□□□ -0.76
ERCC8-205ENST00000477893 TDRD7Q8NHU6 1098 aaKnown RBP10.31□□□□□ -0.76
ERCC8-205ENST00000477893 ZIC5Q96T25 663 aa10.31□□□□□ -0.76
ERCC8-205ENST00000477893 BEGAINQ9BUH8 593 aa10.31□□□□□ -0.76
ERCC8-205ENST00000477893 FZD1Q9UP38 647 aa10.31□□□□□ -0.76
ERCC8-205ENST00000477893 POLR2AP24928 1970 aaKnown RBP10.31□□□□□ -0.76
ERCC8-205ENST00000477893 PITPNM2Q9BZ72 1349 aa10.31□□□□□ -0.76
ERCC8-205ENST00000477893 THSD7BQ9C0I4 1608 aa10.3□□□□□ -0.76
ERCC8-205ENST00000477893 UBE2Q2LH0YL09 131 aa10.3□□□□□ -0.76
ERCC8-205ENST00000477893 GNAI2P04899 355 aa10.3□□□□□ -0.76
ERCC8-205ENST00000477893 LBX1P52954 281 aa10.3□□□□□ -0.76
ERCC8-205ENST00000477893 MAP2K1Q02750 393 aaPredicted RBP10.3□□□□□ -0.76
ERCC8-205ENST00000477893 FBXO33Q7Z6M2 555 aa10.3□□□□□ -0.76
ERCC8-205ENST00000477893 APOBEC3FQ8IUX4 373 aaKnown RBP10.3□□□□□ -0.76
ERCC8-205ENST00000477893 TNS4Q8IZW8 715 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms