RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 SLC10A3P09131 477 aa15.28■□□□□ 0.04
SSR1-205ENST00000475213 IFIT1P09914 478 aaKnown RBP15.28■□□□□ 0.04
SSR1-205ENST00000475213 RBM5P52756 815 aaKnown RBP eCLIP15.28■□□□□ 0.04
SSR1-205ENST00000475213 CHAF1AQ13111 956 aaPredicted RBP15.28■□□□□ 0.04
SSR1-205ENST00000475213 TSKSQ9UJT2 592 aa15.28■□□□□ 0.04
SSR1-205ENST00000475213 FBXO3Q9UK99 471 aa15.28■□□□□ 0.04
SSR1-205ENST00000475213 TTF2Q9UNY4 1162 aaKnown RBP15.28■□□□□ 0.04
SSR1-205ENST00000475213 CASP8AP2Q9UKL3 1982 aa15.27■□□□□ 0.04
SSR1-205ENST00000475213 COL1A1P02452 1464 aaPredicted RBP15.27■□□□□ 0.04
SSR1-205ENST00000475213 CLRN2A0PK11 232 aa15.27■□□□□ 0.04
SSR1-205ENST00000475213 UBE2Q2LH0YL09 131 aa15.27■□□□□ 0.04
SSR1-205ENST00000475213 MYO1BO43795 1136 aa15.27■□□□□ 0.04
SSR1-205ENST00000475213 FRAT2O75474 233 aaPredicted RBP15.27■□□□□ 0.04
SSR1-205ENST00000475213 SLC5A1P13866 664 aa15.27■□□□□ 0.04
SSR1-205ENST00000475213 NF2P35240 595 aa15.27■□□□□ 0.04
SSR1-205ENST00000475213 KIF23Q02241 960 aaPredicted RBP15.27■□□□□ 0.04
SSR1-205ENST00000475213 TTLL12Q14166 644 aaPredicted RBP15.27■□□□□ 0.04
SSR1-205ENST00000475213 RASAL3Q86YV0 1011 aa15.27■□□□□ 0.04
SSR1-205ENST00000475213 LPIN2Q92539 896 aa15.27■□□□□ 0.04
SSR1-205ENST00000475213 DEFB129Q9H1M3 183 aa15.27■□□□□ 0.04
SSR1-205ENST00000475213 SERPINA10Q9UK55 444 aa15.27■□□□□ 0.04
SSR1-205ENST00000475213 PA2G4Q9UQ80 394 aaKnown RBP15.27■□□□□ 0.04
SSR1-205ENST00000475213 C19orf67A6NJJ6 358 aa15.26■□□□□ 0.03
SSR1-205ENST00000475213 CA12O43570 354 aa15.26■□□□□ 0.03
SSR1-205ENST00000475213 GRIK5Q16478 980 aa15.26■□□□□ 0.03
SSR1-205ENST00000475213 TBC1D22AQ8WUA7 517 aa15.26■□□□□ 0.03
SSR1-205ENST00000475213 CLUAP1Q96AJ1 413 aa15.26■□□□□ 0.03
SSR1-205ENST00000475213 VEZTQ9HBM0 779 aa15.26■□□□□ 0.03
SSR1-205ENST00000475213 COPRSQ9NQ92 184 aa15.26■□□□□ 0.03
SSR1-205ENST00000475213 ZBED9Q6R2W3 1325 aa15.25■□□□□ 0.03
SSR1-205ENST00000475213 IL15P40933 162 aaPredicted RBP15.25■□□□□ 0.03
SSR1-205ENST00000475213 PRKG1Q13976 671 aa15.25■□□□□ 0.03
SSR1-205ENST00000475213 CEP126Q9P2H0 1117 aa15.25■□□□□ 0.03
SSR1-205ENST00000475213 PPP2R3BQ9Y5P8 575 aa15.25■□□□□ 0.03
SSR1-205ENST00000475213 CRKP46108 304 aa15.24■□□□□ 0.03
SSR1-205ENST00000475213 MTX1Q13505 466 aa15.24■□□□□ 0.03
SSR1-205ENST00000475213 ATP2B3Q16720 1220 aa15.24■□□□□ 0.03
SSR1-205ENST00000475213 ZKSCAN2Q63HK3 967 aa15.24■□□□□ 0.03
SSR1-205ENST00000475213 ARMC9Q7Z3E5 817 aa15.24■□□□□ 0.03
SSR1-205ENST00000475213 DZIP1LQ8IYY4 767 aaKnown RBP15.24■□□□□ 0.03
SSR1-205ENST00000475213 CSRNP1Q96S65 589 aa15.24■□□□□ 0.03
SSR1-205ENST00000475213 ZNF70Q9UC06 446 aaPredicted RBP15.24■□□□□ 0.03
SSR1-205ENST00000475213 SRGAP3O43295 1099 aa15.23■□□□□ 0.03
SSR1-205ENST00000475213 TMEM57Q8N5G2 664 aa15.23■□□□□ 0.03
SSR1-205ENST00000475213 TDRD3Q9H7E2 651 aaKnown RBP15.23■□□□□ 0.03
SSR1-205ENST00000475213 FZD1Q9UP38 647 aa15.23■□□□□ 0.03
SSR1-205ENST00000475213 FARP1Q9Y4F1 1045 aaPredicted RBP15.23■□□□□ 0.03
SSR1-205ENST00000475213 SSC5DA1L4H1 1573 aa15.23■□□□□ 0.03
SSR1-205ENST00000475213 GNAI2P04899 355 aa15.22■□□□□ 0.03
SSR1-205ENST00000475213 HDLBPQ00341 1268 aaKnown RBP15.22■□□□□ 0.03
SSR1-205ENST00000475213 RASA3Q14644 834 aa15.22■□□□□ 0.03
SSR1-205ENST00000475213 ANGEL1Q9UNK9 670 aaKnown RBP15.22■□□□□ 0.03
SSR1-205ENST00000475213 SUGT1Q9Y2Z0 365 aa15.22■□□□□ 0.03
SSR1-205ENST00000475213 TNFAIP1Q13829 316 aa15.21■□□□□ 0.03
SSR1-205ENST00000475213 MAP3K11Q16584 847 aa15.21■□□□□ 0.03
SSR1-205ENST00000475213 SUPT20HL1Q3ZLR7 823 aa15.21■□□□□ 0.03
SSR1-205ENST00000475213 LDLRAD1Q5T700 205 aa15.21■□□□□ 0.03
SSR1-205ENST00000475213 NBPF12Q5TAG4 269 aaPredicted RBP15.21■□□□□ 0.03
SSR1-205ENST00000475213 WDR66Q8TBY9 1149 aa15.21■□□□□ 0.03
SSR1-205ENST00000475213 TEKT1Q969V4 418 aa15.21■□□□□ 0.03
SSR1-205ENST00000475213 MRIQ9BWK5 157 aa15.21■□□□□ 0.03
SSR1-205ENST00000475213 RNF186Q9NXI6 227 aa15.21■□□□□ 0.03
SSR1-205ENST00000475213 SAGE1Q9NXZ1 904 aa15.21■□□□□ 0.03
SSR1-205ENST00000475213 PPP1R12BO60237 982 aaPredicted RBP15.2■□□□□ 0.02
SSR1-205ENST00000475213 TRPA1O75762 1119 aa15.2■□□□□ 0.02
SSR1-205ENST00000475213 PHKA1P46020 1223 aa15.2■□□□□ 0.02
SSR1-205ENST00000475213 GNL3LQ9NVN8 582 aaKnown RBP15.2■□□□□ 0.02
SSR1-205ENST00000475213 MAST3O60307 1309 aa15.19■□□□□ 0.02
SSR1-205ENST00000475213 PNMA6EA0A0J9YXQ4 647 aa15.19■□□□□ 0.02
SSR1-205ENST00000475213 TCP10L2B9ZVM9 353 aa15.19■□□□□ 0.02
SSR1-205ENST00000475213 ADORA1P30542 326 aa15.19■□□□□ 0.02
SSR1-205ENST00000475213 TIMM10P62072 90 aa15.19■□□□□ 0.02
SSR1-205ENST00000475213 TFCP2Q12800 502 aa15.19■□□□□ 0.02
SSR1-205ENST00000475213 MKRN3Q13064 507 aaKnown RBP15.19■□□□□ 0.02
SSR1-205ENST00000475213 ZDHHC15Q96MV8 337 aa15.19■□□□□ 0.02
SSR1-205ENST00000475213 TEPSINQ96N21 525 aa15.19■□□□□ 0.02
SSR1-205ENST00000475213 OTOFQ9HC10 1997 aa15.18■□□□□ 0.02
SSR1-205ENST00000475213 USP2O75604 605 aaPredicted RBP15.18■□□□□ 0.02
SSR1-205ENST00000475213 RLBP1P12271 317 aa15.18■□□□□ 0.02
SSR1-205ENST00000475213 CCDC102BQ68D86 513 aa15.18■□□□□ 0.02
SSR1-205ENST00000475213 APOBEC3HQ6NTF7 200 aaKnown RBP15.18■□□□□ 0.02
SSR1-205ENST00000475213 HHIPL2Q6UWX4 724 aa15.18■□□□□ 0.02
SSR1-205ENST00000475213 CDAN1Q8IWY9 1227 aa15.18■□□□□ 0.02
SSR1-205ENST00000475213 FTSJ3Q8IY81 847 aaKnown RBP15.18■□□□□ 0.02
SSR1-205ENST00000475213 DENND2AQ9ULE3 1009 aa15.18■□□□□ 0.02
SSR1-205ENST00000475213 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.18■□□□□ 0.02
SSR1-205ENST00000475213 MYH2Q9UKX2 1941 aa15.17■□□□□ 0.02
SSR1-205ENST00000475213 A0A1B0GUL7 405 aa15.17■□□□□ 0.02
SSR1-205ENST00000475213 SEMA3EO15041 775 aa15.17■□□□□ 0.02
SSR1-205ENST00000475213 IREB2P48200 963 aaKnown RBP15.17■□□□□ 0.02
SSR1-205ENST00000475213 TM4SF4P48230 202 aa15.17■□□□□ 0.02
SSR1-205ENST00000475213 TNNI2P48788 182 aa15.17■□□□□ 0.02
SSR1-205ENST00000475213 CACNB3P54284 484 aa15.17■□□□□ 0.02
SSR1-205ENST00000475213 SPRYD7Q5W111 196 aa15.17■□□□□ 0.02
SSR1-205ENST00000475213 SLC10A4Q96EP9 437 aa15.17■□□□□ 0.02
SSR1-205ENST00000475213 CLMNQ96JQ2 1002 aa15.17■□□□□ 0.02
SSR1-205ENST00000475213 TMEM39BQ9GZU3 492 aa15.17■□□□□ 0.02
SSR1-205ENST00000475213 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.17■□□□□ 0.02
SSR1-205ENST00000475213 AKAP2Q9Y2D5 859 aa15.17■□□□□ 0.02
SSR1-205ENST00000475213 LAMB1P07942 1786 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms