RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 TCP10L2B9ZVM9 353 aa12.27□□□□□ -0.45
RPRD1B-204ENST00000471511 IGF2BP3O00425 579 aaKnown RBP eCLIP12.27□□□□□ -0.45
RPRD1B-204ENST00000471511 NF2P35240 595 aa12.27□□□□□ -0.45
RPRD1B-204ENST00000471511 APOBEC3HQ6NTF7 200 aaKnown RBP12.27□□□□□ -0.45
RPRD1B-204ENST00000471511 WNK4Q96J92 1243 aa12.27□□□□□ -0.45
RPRD1B-204ENST00000471511 PTPN18Q99952 460 aa12.27□□□□□ -0.45
RPRD1B-204ENST00000471511 SIL1Q9H173 461 aa12.27□□□□□ -0.45
RPRD1B-204ENST00000471511 SERPINA10Q9UK55 444 aa12.27□□□□□ -0.45
RPRD1B-204ENST00000471511 LRRFIP2Q9Y608 721 aaKnown RBP12.27□□□□□ -0.45
RPRD1B-204ENST00000471511 GPR25O00155 361 aa12.26□□□□□ -0.45
RPRD1B-204ENST00000471511 BCAR3O75815 825 aa12.26□□□□□ -0.45
RPRD1B-204ENST00000471511 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.26□□□□□ -0.45
RPRD1B-204ENST00000471511 SLC10A4Q96EP9 437 aa12.26□□□□□ -0.45
RPRD1B-204ENST00000471511 AKAP11Q9UKA4 1901 aa12.25□□□□□ -0.45
RPRD1B-204ENST00000471511 ADORA1P30542 326 aa12.25□□□□□ -0.45
RPRD1B-204ENST00000471511 PUM3Q15397 648 aaKnown RBP12.25□□□□□ -0.45
RPRD1B-204ENST00000471511 CTU1Q7Z7A3 348 aaKnown RBP12.25□□□□□ -0.45
RPRD1B-204ENST00000471511 REM2Q8IYK8 340 aaPredicted RBP12.25□□□□□ -0.45
RPRD1B-204ENST00000471511 PPP2R3BQ9Y5P8 575 aa12.25□□□□□ -0.45
RPRD1B-204ENST00000471511 MYO1BO43795 1136 aa12.24□□□□□ -0.45
RPRD1B-204ENST00000471511 UBTFL1P0CB47 393 aaPredicted RBP12.24□□□□□ -0.45
RPRD1B-204ENST00000471511 SOX10P56693 466 aa12.24□□□□□ -0.45
RPRD1B-204ENST00000471511 SUPT20HL1Q3ZLR7 823 aa12.24□□□□□ -0.45
RPRD1B-204ENST00000471511 ECM29Q5VYK3 1845 aa12.24□□□□□ -0.45
RPRD1B-204ENST00000471511 VPS37DQ86XT2 251 aa12.24□□□□□ -0.45
RPRD1B-204ENST00000471511 IFNL1Q8IU54 200 aa12.24□□□□□ -0.45
RPRD1B-204ENST00000471511 MIER1Q8N108 512 aa12.24□□□□□ -0.45
RPRD1B-204ENST00000471511 LPIN2Q92539 896 aa12.24□□□□□ -0.45
RPRD1B-204ENST00000471511 CFHR5Q9BXR6 569 aa12.24□□□□□ -0.45
RPRD1B-204ENST00000471511 ELP3Q9H9T3 547 aa12.24□□□□□ -0.45
RPRD1B-204ENST00000471511 PPP1R12BO60237 982 aaPredicted RBP12.23□□□□□ -0.45
RPRD1B-204ENST00000471511 SLURP2P0DP57 97 aa12.23□□□□□ -0.45
RPRD1B-204ENST00000471511 PHKA1P46020 1223 aa12.23□□□□□ -0.45
RPRD1B-204ENST00000471511 HDLBPQ00341 1268 aaKnown RBP12.23□□□□□ -0.45
RPRD1B-204ENST00000471511 DIXDC1Q155Q3 683 aa12.23□□□□□ -0.45
RPRD1B-204ENST00000471511 CAVIN4Q5BKX8 364 aa12.23□□□□□ -0.45
RPRD1B-204ENST00000471511 INTS3Q68E01 1043 aaKnown RBP12.23□□□□□ -0.45
RPRD1B-204ENST00000471511 ZFPM1Q8IX07 1006 aa12.23□□□□□ -0.45
RPRD1B-204ENST00000471511 MS4A4AQ96JQ5 239 aa12.23□□□□□ -0.45
RPRD1B-204ENST00000471511 ZDHHC15Q96MV8 337 aa12.23□□□□□ -0.45
RPRD1B-204ENST00000471511 API5Q9BZZ5 524 aaKnown RBP12.23□□□□□ -0.45
RPRD1B-204ENST00000471511 HPS5Q9UPZ3 1129 aa12.23□□□□□ -0.45
RPRD1B-204ENST00000471511 TNRC18O15417 2968 aaPredicted RBP12.23□□□□□ -0.45
RPRD1B-204ENST00000471511 ARAP2Q8WZ64 1704 aa12.23□□□□□ -0.45
RPRD1B-204ENST00000471511 KIF16BQ96L93 1317 aa12.22□□□□□ -0.45
RPRD1B-204ENST00000471511 TESPA1A2RU30 521 aaPredicted RBP12.22□□□□□ -0.45
RPRD1B-204ENST00000471511 FRAT2O75474 233 aaPredicted RBP12.22□□□□□ -0.45
RPRD1B-204ENST00000471511 CIAO1O76071 339 aa12.22□□□□□ -0.45
RPRD1B-204ENST00000471511 IFIT1P09914 478 aaKnown RBP12.22□□□□□ -0.45
RPRD1B-204ENST00000471511 CT47B1P0C2W7 299 aaPredicted RBP12.22□□□□□ -0.45
RPRD1B-204ENST00000471511 PRDX5P30044 214 aa12.22□□□□□ -0.45
RPRD1B-204ENST00000471511 TIMM10P62072 90 aa12.22□□□□□ -0.45
RPRD1B-204ENST00000471511 NFIAQ12857 509 aa12.22□□□□□ -0.45
RPRD1B-204ENST00000471511 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.22□□□□□ -0.45
RPRD1B-204ENST00000471511 MRIQ9BWK5 157 aa12.22□□□□□ -0.45
RPRD1B-204ENST00000471511 COPRSQ9NQ92 184 aa12.22□□□□□ -0.45
RPRD1B-204ENST00000471511 OTOFQ9HC10 1997 aa12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 MANSC4A6NHS7 340 aaPredicted RBP12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 ZBTB48P10074 688 aaPredicted RBP12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 SLC5A1P13866 664 aa12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 TRIM27P14373 513 aa12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 IREB2P48200 963 aaKnown RBP12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 SREBF2Q12772 1141 aa12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 VGLL4Q14135 290 aa12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 ATP2B3Q16720 1220 aa12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 NOM1Q5C9Z4 860 aaKnown RBP12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 ANKRD13AQ8IZ07 590 aa12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 TBC1D22AQ8WUA7 517 aa12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 BRI3BPQ8WY22 251 aa12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 TEKT1Q969V4 418 aa12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 OPTNQ96CV9 577 aa12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 DAGLAQ9Y4D2 1042 aa12.21□□□□□ -0.45
RPRD1B-204ENST00000471511 PNMA6EA0A0J9YXQ4 647 aa12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 FKTNO75072 461 aa12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 MAP3K9P80192 1104 aa12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 MLLT1Q03111 559 aaPredicted RBP12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 CRHR2Q13324 411 aa12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 CDC42EP5Q6NZY7 148 aa12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 HHIPL2Q6UWX4 724 aa12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 MIGA2Q7L4E1 593 aa12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 ZNF384Q8TF68 577 aa12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 ARHGAP45Q92619 1136 aa12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 ZKSCAN4Q969J2 545 aaPredicted RBP12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 CLUAP1Q96AJ1 413 aa12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 RNF216Q9NWF9 866 aaPredicted RBP12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 CEP126Q9P2H0 1117 aa12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 FAM198AQ9UFP1 575 aa12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 SNCAIPQ9Y6H5 919 aa12.2□□□□□ -0.46
RPRD1B-204ENST00000471511 UNCXA6NJT0 531 aa12.19□□□□□ -0.46
RPRD1B-204ENST00000471511 IL15P40933 162 aaPredicted RBP12.19□□□□□ -0.46
RPRD1B-204ENST00000471511 TFCP2Q12800 502 aa12.19□□□□□ -0.46
RPRD1B-204ENST00000471511 CCDC102BQ68D86 513 aa12.19□□□□□ -0.46
RPRD1B-204ENST00000471511 FAM43AQ8N2R8 423 aa12.19□□□□□ -0.46
RPRD1B-204ENST00000471511 HTTP42858 3142 aa12.19□□□□□ -0.46
RPRD1B-204ENST00000471511 INPP5BP32019 993 aa12.18□□□□□ -0.46
RPRD1B-204ENST00000471511 INHBEP58166 350 aa12.18□□□□□ -0.46
RPRD1B-204ENST00000471511 TCP10Q12799 353 aa12.18□□□□□ -0.46
RPRD1B-204ENST00000471511 MTX1Q13505 466 aa12.18□□□□□ -0.46
RPRD1B-204ENST00000471511 TNFAIP1Q13829 316 aa12.18□□□□□ -0.46
RPRD1B-204ENST00000471511 RASGRF1Q13972 1273 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms