RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 APOBEC3FQ8IUX4 373 aaKnown RBP15.59■□□□□ 0.09
ABCF1-204ENST00000468958 CEP126Q9P2H0 1117 aa15.59■□□□□ 0.09
ABCF1-204ENST00000468958 CASP8AP2Q9UKL3 1982 aa15.58■□□□□ 0.09
ABCF1-204ENST00000468958 UBE2Q2LH0YL09 131 aa15.58■□□□□ 0.08
ABCF1-204ENST00000468958 ZBTB7BO15156 539 aaPredicted RBP15.58■□□□□ 0.08
ABCF1-204ENST00000468958 MAP2K2P36507 400 aa15.58■□□□□ 0.08
ABCF1-204ENST00000468958 CRKP46108 304 aa15.58■□□□□ 0.08
ABCF1-204ENST00000468958 TIMM10P62072 90 aa15.58■□□□□ 0.08
ABCF1-204ENST00000468958 TFCP2Q12800 502 aa15.58■□□□□ 0.08
ABCF1-204ENST00000468958 PDE3AQ14432 1141 aa15.58■□□□□ 0.08
ABCF1-204ENST00000468958 RASAL3Q86YV0 1011 aa15.58■□□□□ 0.08
ABCF1-204ENST00000468958 ITPRIPQ8IWB1 547 aa15.58■□□□□ 0.08
ABCF1-204ENST00000468958 CDAN1Q8IWY9 1227 aa15.58■□□□□ 0.08
ABCF1-204ENST00000468958 PANK1Q8TE04 598 aa15.58■□□□□ 0.08
ABCF1-204ENST00000468958 DEFB129Q9H1M3 183 aa15.58■□□□□ 0.08
ABCF1-204ENST00000468958 TDRD3Q9H7E2 651 aaKnown RBP15.58■□□□□ 0.08
ABCF1-204ENST00000468958 TSKSQ9UJT2 592 aa15.58■□□□□ 0.08
ABCF1-204ENST00000468958 SLC10A3P09131 477 aa15.57■□□□□ 0.08
ABCF1-204ENST00000468958 ZNF157P51786 506 aaPredicted RBP15.57■□□□□ 0.08
ABCF1-204ENST00000468958 RBM5P52756 815 aaKnown RBP eCLIP15.57■□□□□ 0.088e-7■□□□□ 8.3
ABCF1-204ENST00000468958 LBX1P52954 281 aa15.57■□□□□ 0.08
ABCF1-204ENST00000468958 MAP2K1Q02750 393 aaPredicted RBP15.57■□□□□ 0.08
ABCF1-204ENST00000468958 PRKG1Q13976 671 aa15.57■□□□□ 0.08
ABCF1-204ENST00000468958 SPDYE2Q495Y8 402 aa15.57■□□□□ 0.08
ABCF1-204ENST00000468958 SERPINA10Q9UK55 444 aa15.57■□□□□ 0.08
ABCF1-204ENST00000468958 FRAT2O75474 233 aaPredicted RBP15.56■□□□□ 0.08
ABCF1-204ENST00000468958 POLA2Q14181 598 aa15.56■□□□□ 0.08
ABCF1-204ENST00000468958 VEZTQ9HBM0 779 aa15.56■□□□□ 0.08
ABCF1-204ENST00000468958 ZNF70Q9UC06 446 aaPredicted RBP15.56■□□□□ 0.08
ABCF1-204ENST00000468958 DDX19BQ9UMR2 479 aa15.56■□□□□ 0.08
ABCF1-204ENST00000468958 A0A1B0GUL7 405 aa15.55■□□□□ 0.08
ABCF1-204ENST00000468958 CTCFP49711 727 aaPredicted RBP15.55■□□□□ 0.08
ABCF1-204ENST00000468958 FKBP1BP68106 108 aa15.55■□□□□ 0.08
ABCF1-204ENST00000468958 KIF23Q02241 960 aaPredicted RBP15.55■□□□□ 0.08
ABCF1-204ENST00000468958 NOGQ13253 232 aa15.55■□□□□ 0.08
ABCF1-204ENST00000468958 NBPF12Q5TAG4 269 aaPredicted RBP15.55■□□□□ 0.08
ABCF1-204ENST00000468958 IFFO2Q5TF58 517 aa15.55■□□□□ 0.08
ABCF1-204ENST00000468958 CCDC102BQ68D86 513 aa15.55■□□□□ 0.08
ABCF1-204ENST00000468958 SSH3Q8TE77 659 aa15.55■□□□□ 0.08
ABCF1-204ENST00000468958 TBC1D22AQ8WUA7 517 aa15.55■□□□□ 0.08
ABCF1-204ENST00000468958 AIDAQ96BJ3 306 aa15.55■□□□□ 0.08
ABCF1-204ENST00000468958 PRDX5P30044 214 aa15.54■□□□□ 0.08
ABCF1-204ENST00000468958 CACNB3P54284 484 aa15.54■□□□□ 0.08
ABCF1-204ENST00000468958 ATP8B2P98198 1209 aa15.54■□□□□ 0.08
ABCF1-204ENST00000468958 RASA3Q14644 834 aa15.54■□□□□ 0.08
ABCF1-204ENST00000468958 MVPQ14764 893 aaKnown RBP15.54■□□□□ 0.08
ABCF1-204ENST00000468958 XAGE2Q96GT9 111 aa15.54■□□□□ 0.08
ABCF1-204ENST00000468958 TEPSINQ96N21 525 aa15.54■□□□□ 0.08
ABCF1-204ENST00000468958 CDK5RAP2Q96SN8 1893 aa15.54■□□□□ 0.08
ABCF1-204ENST00000468958 AK9Q5TCS8 1911 aa15.53■□□□□ 0.08
ABCF1-204ENST00000468958 DOCK2Q92608 1830 aa15.53■□□□□ 0.08
ABCF1-204ENST00000468958 RRP1P56182 461 aaKnown RBP15.53■□□□□ 0.08
ABCF1-204ENST00000468958 DIXDC1Q155Q3 683 aa15.53■□□□□ 0.08
ABCF1-204ENST00000468958 APOBEC3HQ6NTF7 200 aaKnown RBP15.53■□□□□ 0.08
ABCF1-204ENST00000468958 CSRNP1Q96S65 589 aa15.53■□□□□ 0.08
ABCF1-204ENST00000468958 PRDM10Q9NQV6 1147 aa15.53■□□□□ 0.08
ABCF1-204ENST00000468958 MAST2Q6P0Q8 1798 aa15.52■□□□□ 0.08
ABCF1-204ENST00000468958 TCP10L2B9ZVM9 353 aa15.52■□□□□ 0.08
ABCF1-204ENST00000468958 MYO1BO43795 1136 aa15.52■□□□□ 0.08
ABCF1-204ENST00000468958 HDLBPQ00341 1268 aaKnown RBP15.52■□□□□ 0.08
ABCF1-204ENST00000468958 RASGRF1Q13972 1273 aa15.52■□□□□ 0.08
ABCF1-204ENST00000468958 TTLL12Q14166 644 aaPredicted RBP15.52■□□□□ 0.08
ABCF1-204ENST00000468958 LDLRAD1Q5T700 205 aa15.52■□□□□ 0.08
ABCF1-204ENST00000468958 WDR66Q8TBY9 1149 aa15.52■□□□□ 0.08
ABCF1-204ENST00000468958 TEKT1Q969V4 418 aa15.52■□□□□ 0.08
ABCF1-204ENST00000468958 CCDC102AQ96A19 550 aa15.52■□□□□ 0.08
ABCF1-204ENST00000468958 ZDHHC15Q96MV8 337 aa15.52■□□□□ 0.08
ABCF1-204ENST00000468958 TMEM39BQ9GZU3 492 aa15.52■□□□□ 0.08
ABCF1-204ENST00000468958 ANGEL1Q9UNK9 670 aaKnown RBP15.52■□□□□ 0.08
ABCF1-204ENST00000468958 PPP2R3BQ9Y5P8 575 aa15.52■□□□□ 0.08
ABCF1-204ENST00000468958 SALL1Q9NSC2 1324 aa15.51■□□□□ 0.07
ABCF1-204ENST00000468958 MAP3K11Q16584 847 aa15.51■□□□□ 0.07
ABCF1-204ENST00000468958 CEP85Q6P2H3 762 aa15.51■□□□□ 0.07
ABCF1-204ENST00000468958 PI16Q6UXB8 463 aa15.51■□□□□ 0.07
ABCF1-204ENST00000468958 TNS4Q8IZW8 715 aa15.51■□□□□ 0.07
ABCF1-204ENST00000468958 CLMNQ96JQ2 1002 aa15.51■□□□□ 0.07
ABCF1-204ENST00000468958 MRIQ9BWK5 157 aa15.51■□□□□ 0.07
ABCF1-204ENST00000468958 SUGT1Q9Y2Z0 365 aa15.51■□□□□ 0.07
ABCF1-204ENST00000468958 USP2O75604 605 aaPredicted RBP15.5■□□□□ 0.07
ABCF1-204ENST00000468958 NF2P35240 595 aa15.5■□□□□ 0.07
ABCF1-204ENST00000468958 MKRN3Q13064 507 aaKnown RBP15.5■□□□□ 0.07
ABCF1-204ENST00000468958 C20orf194Q5TEA3 1177 aa15.5■□□□□ 0.07
ABCF1-204ENST00000468958 HHIPL2Q6UWX4 724 aa15.5■□□□□ 0.07
ABCF1-204ENST00000468958 ZNF384Q8TF68 577 aa15.5■□□□□ 0.07
ABCF1-204ENST00000468958 NEUROD6Q96NK8 337 aa15.5■□□□□ 0.07
ABCF1-204ENST00000468958 DENND2AQ9ULE3 1009 aa15.5■□□□□ 0.07
ABCF1-204ENST00000468958 DAGLAQ9Y4D2 1042 aa15.5■□□□□ 0.07
ABCF1-204ENST00000468958 SEMA3EO15041 775 aa15.49■□□□□ 0.07
ABCF1-204ENST00000468958 G3BP1Q13283 466 aaKnown RBP eCLIP15.49■□□□□ 0.073e-8■■■■■ 28.5
ABCF1-204ENST00000468958 AKAP2Q9Y2D5 859 aa15.49■□□□□ 0.07
ABCF1-204ENST00000468958 COG6Q9Y2V7 657 aa15.49■□□□□ 0.07
ABCF1-204ENST00000468958 NOP58Q9Y2X3 529 aaKnown RBP15.49■□□□□ 0.07
ABCF1-204ENST00000468958 FOCADQ5VW36 1801 aa15.49■□□□□ 0.07
ABCF1-204ENST00000468958 MAST3O60307 1309 aa15.48■□□□□ 0.07
ABCF1-204ENST00000468958 SURF6O75683 361 aaKnown RBP15.48■□□□□ 0.07
ABCF1-204ENST00000468958 GJA5P36382 358 aa15.48■□□□□ 0.07
ABCF1-204ENST00000468958 AAMPQ13685 434 aa15.48■□□□□ 0.07
ABCF1-204ENST00000468958 ARMC9Q7Z3E5 817 aa15.48■□□□□ 0.07
ABCF1-204ENST00000468958 GNL3LQ9NVN8 582 aaKnown RBP15.48■□□□□ 0.07
ABCF1-204ENST00000468958 RNF186Q9NXI6 227 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms