RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 S1PR4O95977 384 aa11.93□□□□□ -0.5
ATG3-203ENST00000465980 PCCAP05165 728 aaPredicted RBP11.93□□□□□ -0.5
ATG3-203ENST00000465980 NEFLP07196 543 aa11.93□□□□□ -0.5
ATG3-203ENST00000465980 GPSM2P81274 684 aa11.93□□□□□ -0.5
ATG3-203ENST00000465980 FMR1Q06787 632 aaKnown RBP eCLIP11.93□□□□□ -0.5
ATG3-203ENST00000465980 HIC1Q14526 733 aa11.93□□□□□ -0.5
ATG3-203ENST00000465980 CIAPIN1Q6FI81 312 aa11.93□□□□□ -0.5
ATG3-203ENST00000465980 G2E3Q7L622 706 aa11.93□□□□□ -0.5
ATG3-203ENST00000465980 CHMP4AQ9BY43 222 aa11.93□□□□□ -0.5
ATG3-203ENST00000465980 VPS33BQ9H267 617 aa11.93□□□□□ -0.5
ATG3-203ENST00000465980 DBNDD1Q9H9R9 158 aa11.93□□□□□ -0.5
ATG3-203ENST00000465980 GTF3C3Q9Y5Q9 886 aa11.93□□□□□ -0.5
ATG3-203ENST00000465980 TMEM88BA6NKF7 163 aa11.92□□□□□ -0.5
ATG3-203ENST00000465980 YDJCA8MPS7 323 aa11.92□□□□□ -0.5
ATG3-203ENST00000465980 IGKV5-2P06315 115 aa11.92□□□□□ -0.5
ATG3-203ENST00000465980 HSPA1AP0DMV8 641 aaKnown RBP11.92□□□□□ -0.5
ATG3-203ENST00000465980 HSPA1BP0DMV9 641 aaKnown RBP11.92□□□□□ -0.5
ATG3-203ENST00000465980 RARSP54136 660 aaKnown RBP11.92□□□□□ -0.5
ATG3-203ENST00000465980 RRP1P56182 461 aaKnown RBP11.92□□□□□ -0.5
ATG3-203ENST00000465980 RPS8P62241 208 aaKnown RBP11.92□□□□□ -0.5
ATG3-203ENST00000465980 CWF19L2Q2TBE0 894 aaKnown RBP11.92□□□□□ -0.5
ATG3-203ENST00000465980 CCDC152Q4G0S7 254 aa11.92□□□□□ -0.5
ATG3-203ENST00000465980 KSR2Q6VAB6 950 aa11.92□□□□□ -0.5
ATG3-203ENST00000465980 BCL2L13Q9BXK5 485 aa11.92□□□□□ -0.5
ATG3-203ENST00000465980 GPRC5DQ9NZD1 345 aa11.92□□□□□ -0.5
ATG3-203ENST00000465980 CNTNAP1P78357 1384 aa11.92□□□□□ -0.5
ATG3-203ENST00000465980 SHTN1A0MZ66 631 aa11.91□□□□□ -0.5
ATG3-203ENST00000465980 PDE8AO60658 829 aa11.91□□□□□ -0.5
ATG3-203ENST00000465980 VAMP4O75379 141 aa11.91□□□□□ -0.5
ATG3-203ENST00000465980 HSP90B1P14625 803 aaKnown RBP11.91□□□□□ -0.5
ATG3-203ENST00000465980 NEXNQ0ZGT2 675 aa11.91□□□□□ -0.5
ATG3-203ENST00000465980 WASHC4Q2M389 1173 aa11.91□□□□□ -0.5
ATG3-203ENST00000465980 ZNF787Q6DD87 383 aa11.91□□□□□ -0.5
ATG3-203ENST00000465980 ADARB2Q9NS39 739 aaKnown RBP11.91□□□□□ -0.5
ATG3-203ENST00000465980 POLLQ9UGP5 575 aa11.91□□□□□ -0.5
ATG3-203ENST00000465980 TRAF5O00463 557 aa11.9□□□□□ -0.5
ATG3-203ENST00000465980 UFL1O94874 794 aa11.9□□□□□ -0.5
ATG3-203ENST00000465980 TNIP1Q15025 636 aa11.9□□□□□ -0.5
ATG3-203ENST00000465980 ALDH1L2Q3SY69 923 aa11.9□□□□□ -0.5
ATG3-203ENST00000465980 USP50Q70EL3 339 aaPredicted RBP11.9□□□□□ -0.5
ATG3-203ENST00000465980 TRPM4Q8TD43 1214 aa11.9□□□□□ -0.5
ATG3-203ENST00000465980 ANKIB1Q9P2G1 1089 aa11.9□□□□□ -0.5
ATG3-203ENST00000465980 ABT1Q9ULW3 272 aaKnown RBP11.9□□□□□ -0.5
ATG3-203ENST00000465980 NEURL1BA8MQ27 555 aa11.89□□□□□ -0.51
ATG3-203ENST00000465980 PSMD14O00487 310 aa11.89□□□□□ -0.51
ATG3-203ENST00000465980 ECE2O60344 883 aa11.89□□□□□ -0.51
ATG3-203ENST00000465980 BCAR3O75815 825 aa11.89□□□□□ -0.51
ATG3-203ENST00000465980 DGAT1O75907 488 aa11.89□□□□□ -0.51
ATG3-203ENST00000465980 VEGFBP49765 207 aa11.89□□□□□ -0.51
ATG3-203ENST00000465980 CTSWP56202 376 aa11.89□□□□□ -0.51
ATG3-203ENST00000465980 FLIIQ13045 1269 aa11.89□□□□□ -0.51
ATG3-203ENST00000465980 FKBP5Q13451 457 aaPredicted RBP11.89□□□□□ -0.51
ATG3-203ENST00000465980 COL13A1Q5TAT6 717 aaPredicted RBP11.89□□□□□ -0.51
ATG3-203ENST00000465980 UBE3BQ7Z3V4 1068 aa11.89□□□□□ -0.51
ATG3-203ENST00000465980 METTL3Q86U44 580 aaKnown RBP11.89□□□□□ -0.51
ATG3-203ENST00000465980 ANKRD18AQ8IVF6 992 aa11.89□□□□□ -0.51
ATG3-203ENST00000465980 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.89□□□□□ -0.51
ATG3-203ENST00000465980 TBC1D16Q8TBP0 767 aa11.89□□□□□ -0.51
ATG3-203ENST00000465980 EYA3Q99504 573 aa11.89□□□□□ -0.51
ATG3-203ENST00000465980 A0A1B0GUL6 1792 aa11.89□□□□□ -0.51
ATG3-203ENST00000465980 CDHR2Q9BYE9 1310 aa11.88□□□□□ -0.51
ATG3-203ENST00000465980 SLC6A16Q9GZN6 736 aa11.88□□□□□ -0.51
ATG3-203ENST00000465980 GREM2Q9H772 168 aa11.88□□□□□ -0.51
ATG3-203ENST00000465980 KCNQ5Q9NR82 932 aa11.88□□□□□ -0.51
ATG3-203ENST00000465980 CNOT7Q9UIV1 285 aaKnown RBP11.88□□□□□ -0.51
ATG3-203ENST00000465980 GGA1Q9UJY5 639 aa11.88□□□□□ -0.51
ATG3-203ENST00000465980 H7C1D1 291 aa11.87□□□□□ -0.51
ATG3-203ENST00000465980 BRPF1P55201 1214 aaPredicted RBP11.87□□□□□ -0.51
ATG3-203ENST00000465980 GRM1Q13255 1194 aa11.87□□□□□ -0.51
ATG3-203ENST00000465980 ERICH6BQ5W0A0 696 aa11.87□□□□□ -0.51
ATG3-203ENST00000465980 SMYD5Q6GMV2 418 aa11.87□□□□□ -0.51
ATG3-203ENST00000465980 LIAT1Q6ZQX7 453 aa11.87□□□□□ -0.51
ATG3-203ENST00000465980 DNAAF4Q8WXU2 420 aa11.87□□□□□ -0.51
ATG3-203ENST00000465980 SSH1Q8WYL5 1049 aa11.87□□□□□ -0.51
ATG3-203ENST00000465980 GLIS2Q9BZE0 524 aaPredicted RBP11.87□□□□□ -0.51
ATG3-203ENST00000465980 ZC3H12CQ9C0D7 883 aaKnown RBP11.87□□□□□ -0.51
ATG3-203ENST00000465980 ZNF646O15015 1829 aaPredicted RBP11.87□□□□□ -0.51
ATG3-203ENST00000465980 RTL9Q8NET4 1388 aa11.87□□□□□ -0.51
ATG3-203ENST00000465980 TESPA1A2RU30 521 aaPredicted RBP11.86□□□□□ -0.51
ATG3-203ENST00000465980 HIRAP54198 1017 aaPredicted RBP11.86□□□□□ -0.51
ATG3-203ENST00000465980 TBC1D10BQ4KMP7 808 aaPredicted RBP11.86□□□□□ -0.51
ATG3-203ENST00000465980 PKDCCQ504Y2 493 aa11.86□□□□□ -0.51
ATG3-203ENST00000465980 ZNF697Q5TEC3 545 aa11.86□□□□□ -0.51
ATG3-203ENST00000465980 SCUBE3Q8IX30 993 aa11.86□□□□□ -0.51
ATG3-203ENST00000465980 TTLL11Q8NHH1 800 aa11.86□□□□□ -0.51
ATG3-203ENST00000465980 CDC5LQ99459 802 aaKnown RBP11.86□□□□□ -0.51
ATG3-203ENST00000465980 ZNF408Q9H9D4 720 aa11.86□□□□□ -0.51
ATG3-203ENST00000465980 SMC4Q9NTJ3 1288 aa11.86□□□□□ -0.51
ATG3-203ENST00000465980 PODXL2Q9NZ53 605 aa11.86□□□□□ -0.51
ATG3-203ENST00000465980 XDHP47989 1333 aa11.86□□□□□ -0.51
ATG3-203ENST00000465980 WTIPA6NIX2 430 aaPredicted RBP11.85□□□□□ -0.51
ATG3-203ENST00000465980 RASSF10A6NK89 507 aa11.85□□□□□ -0.51
ATG3-203ENST00000465980 F6X3S4 739 aa11.85□□□□□ -0.51
ATG3-203ENST00000465980 PLIN1O60240 522 aa11.85□□□□□ -0.51
ATG3-203ENST00000465980 EGFRP00533 1210 aa11.85□□□□□ -0.51
ATG3-203ENST00000465980 IRX6P78412 446 aaPredicted RBP11.85□□□□□ -0.51
ATG3-203ENST00000465980 GCKRQ14397 625 aa11.85□□□□□ -0.51
ATG3-203ENST00000465980 DEFB115Q30KQ5 88 aa11.85□□□□□ -0.51
ATG3-203ENST00000465980 RBM26Q5T8P6 1007 aaKnown RBP11.85□□□□□ -0.51
ATG3-203ENST00000465980 H7C1W4 665 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms