RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ABCF2Q9UG63 623 aa20.68■□□□□ 0.9
USP39-211ENST00000465282 MYH2Q9UKX2 1941 aa20.67■□□□□ 0.9
USP39-211ENST00000465282 TMED8Q6PL24 325 aaPredicted RBP20.67■□□□□ 0.9
USP39-211ENST00000465282 HHIPL2Q6UWX4 724 aa20.67■□□□□ 0.9
USP39-211ENST00000465282 ERICH6Q7L0X2 663 aa20.67■□□□□ 0.9
USP39-211ENST00000465282 TEKT1Q969V4 418 aa20.67■□□□□ 0.9
USP39-211ENST00000465282 ZBED3Q96IU2 234 aaPredicted RBP20.67■□□□□ 0.9
USP39-211ENST00000465282 BCL11AQ9H165 835 aa20.67■□□□□ 0.9
USP39-211ENST00000465282 TTC41PQ6P2S7 1318 aa20.67■□□□□ 0.9
USP39-211ENST00000465282 WNT10BO00744 389 aa20.66■□□□□ 0.9
USP39-211ENST00000465282 MYO1BO43795 1136 aa20.66■□□□□ 0.9
USP39-211ENST00000465282 EGFRP00533 1210 aa20.66■□□□□ 0.9
USP39-211ENST00000465282 PRDX5P30044 214 aa20.66■□□□□ 0.9
USP39-211ENST00000465282 NUCB1Q02818 461 aa20.66■□□□□ 0.9
USP39-211ENST00000465282 TTF1Q15361 905 aaPredicted RBP20.66■□□□□ 0.9
USP39-211ENST00000465282 GRIK5Q16478 980 aa20.66■□□□□ 0.9
USP39-211ENST00000465282 CFAP100Q494V2 611 aa20.66■□□□□ 0.9
USP39-211ENST00000465282 PITPNM2Q9BZ72 1349 aa20.66■□□□□ 0.9
USP39-211ENST00000465282 CYP2E1P05181 493 aaPredicted RBP20.65■□□□□ 0.9
USP39-211ENST00000465282 POTEIP0CG38 1075 aa20.65■□□□□ 0.9
USP39-211ENST00000465282 POTEJP0CG39 1038 aa20.65■□□□□ 0.9
USP39-211ENST00000465282 ZAP70P43403 619 aa20.65■□□□□ 0.9
USP39-211ENST00000465282 CRKP46108 304 aa20.65■□□□□ 0.9
USP39-211ENST00000465282 PI16Q6UXB8 463 aa20.65■□□□□ 0.9
USP39-211ENST00000465282 ZDHHC15Q96MV8 337 aa20.65■□□□□ 0.9
USP39-211ENST00000465282 SNRKQ9NRH2 765 aa20.65■□□□□ 0.9
USP39-211ENST00000465282 LRP2BPQ9P2M1 347 aa20.65■□□□□ 0.9
USP39-211ENST00000465282 MYO5AQ9Y4I1 1855 aaKnown RBP20.64■□□□□ 0.9
USP39-211ENST00000465282 DOCK2Q92608 1830 aa20.64■□□□□ 0.9
USP39-211ENST00000465282 SPDYE2BA6NHP3 402 aa20.64■□□□□ 0.89
USP39-211ENST00000465282 ERC2O15083 957 aa20.64■□□□□ 0.89
USP39-211ENST00000465282 SPDYE6P0CI01 402 aa20.64■□□□□ 0.89
USP39-211ENST00000465282 RBM5P52756 815 aaKnown RBP eCLIP20.64■□□□□ 0.89
USP39-211ENST00000465282 GSTO1P78417 241 aa20.64■□□□□ 0.89
USP39-211ENST00000465282 CHD1LQ86WJ1 897 aa20.64■□□□□ 0.89
USP39-211ENST00000465282 DZIP1Q86YF9 867 aaKnown RBP20.64■□□□□ 0.89
USP39-211ENST00000465282 FAM163AQ96GL9 167 aaPredicted RBP20.64■□□□□ 0.89
USP39-211ENST00000465282 LDHCP07864 332 aa20.63■□□□□ 0.89
USP39-211ENST00000465282 NBPF9Q3BBW0 867 aa20.63■□□□□ 0.89
USP39-211ENST00000465282 B4GALNT3Q6L9W6 998 aa20.63■□□□□ 0.89
USP39-211ENST00000465282 CNTROBQ8N137 903 aa20.63■□□□□ 0.89
USP39-211ENST00000465282 DCPSQ96C86 337 aaKnown RBP20.63■□□□□ 0.89
USP39-211ENST00000465282 HAUS7Q99871 368 aa20.63■□□□□ 0.89
USP39-211ENST00000465282 MAST2Q6P0Q8 1798 aa20.63■□□□□ 0.89
USP39-211ENST00000465282 MX1P20591 662 aa20.62■□□□□ 0.89
USP39-211ENST00000465282 TBC1D9Q6ZT07 1266 aa20.62■□□□□ 0.89
USP39-211ENST00000465282 CDC37L1Q7L3B6 337 aa20.62■□□□□ 0.89
USP39-211ENST00000465282 PRMT6Q96LA8 375 aaPredicted RBP20.62■□□□□ 0.89
USP39-211ENST00000465282 LNPKQ9C0E8 428 aa20.62■□□□□ 0.89
USP39-211ENST00000465282 RAI14Q9P0K7 980 aa20.62■□□□□ 0.89
USP39-211ENST00000465282 STAP2Q9UGK3 403 aa20.62■□□□□ 0.89
USP39-211ENST00000465282 SALL3Q9BXA9 1300 aa20.61■□□□□ 0.89
USP39-211ENST00000465282 GLRX3O76003 335 aaKnown RBP20.61■□□□□ 0.89
USP39-211ENST00000465282 MECOMQ03112 1051 aa20.61■□□□□ 0.89
USP39-211ENST00000465282 MAP3K12Q12852 859 aa20.61■□□□□ 0.89
USP39-211ENST00000465282 APOBEC3FQ8IUX4 373 aaKnown RBP20.61■□□□□ 0.89
USP39-211ENST00000465282 NSUN4Q96CB9 384 aaKnown RBP20.61■□□□□ 0.89
USP39-211ENST00000465282 BOLA2Q9H3K6 86 aa20.61■□□□□ 0.89
USP39-211ENST00000465282 GGA3Q9NZ52 723 aa20.61■□□□□ 0.89
USP39-211ENST00000465282 GAKO14976 1311 aa20.6■□□□□ 0.89
USP39-211ENST00000465282 ITGBL1O95965 494 aaPredicted RBP20.6■□□□□ 0.89
USP39-211ENST00000465282 C1QTNF8P60827 252 aa20.6■□□□□ 0.89
USP39-211ENST00000465282 ANGEL2Q5VTE6 544 aaKnown RBP20.6■□□□□ 0.89
USP39-211ENST00000465282 MAP1SQ66K74 1059 aaPredicted RBP20.6■□□□□ 0.89
USP39-211ENST00000465282 SULF1Q8IWU6 871 aa20.6■□□□□ 0.89
USP39-211ENST00000465282 PAG1Q9NWQ8 432 aa20.6■□□□□ 0.89
USP39-211ENST00000465282 MYH7P12883 1935 aa20.6■□□□□ 0.89
USP39-211ENST00000465282 TRPM7Q96QT4 1865 aa20.6■□□□□ 0.89
USP39-211ENST00000465282 MAP4K4O95819 1239 aaPredicted RBP20.59■□□□□ 0.89
USP39-211ENST00000465282 APOBEC3HQ6NTF7 200 aaKnown RBP20.59■□□□□ 0.89
USP39-211ENST00000465282 CENPQQ7L2Z9 268 aaPredicted RBP20.59■□□□□ 0.89
USP39-211ENST00000465282 DNAJC2Q99543 621 aaKnown RBP20.59■□□□□ 0.89
USP39-211ENST00000465282 PIH1D3Q9NQM4 214 aaKnown RBP20.59■□□□□ 0.89
USP39-211ENST00000465282 MROH7-TTC4A0A0A0MT08 1334 aa20.58■□□□□ 0.89
USP39-211ENST00000465282 AOX1Q06278 1338 aa20.58■□□□□ 0.89
USP39-211ENST00000465282 GOLIM4O00461 696 aa20.58■□□□□ 0.89
USP39-211ENST00000465282 PDE1AP54750 535 aa20.58■□□□□ 0.89
USP39-211ENST00000465282 TNFAIP1Q13829 316 aa20.58■□□□□ 0.89
USP39-211ENST00000465282 DIXDC1Q155Q3 683 aa20.58■□□□□ 0.89
USP39-211ENST00000465282 SPDYE2Q495Y8 402 aa20.58■□□□□ 0.89
USP39-211ENST00000465282 FKBP1CQ5VVH2 108 aa20.58■□□□□ 0.89
USP39-211ENST00000465282 NAA16Q6N069 864 aaPredicted RBP20.58■□□□□ 0.89
USP39-211ENST00000465282 KRT26Q7Z3Y9 468 aa20.58■□□□□ 0.89
USP39-211ENST00000465282 DAGLAQ9Y4D2 1042 aa20.58■□□□□ 0.89
USP39-211ENST00000465282 IDH1O75874 414 aaKnown RBP20.57■□□□□ 0.88
USP39-211ENST00000465282 PI4K2BQ8TCG2 481 aa20.57■□□□□ 0.88
USP39-211ENST00000465282 OTUD7AQ8TE49 926 aaPredicted RBP20.57■□□□□ 0.88
USP39-211ENST00000465282 CCDC136Q96JN2 1154 aa20.57■□□□□ 0.88
USP39-211ENST00000465282 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.57■□□□□ 0.881e-6■■■□□ 14.8
USP39-211ENST00000465282 OSBPL3Q9H4L5 887 aa20.57■□□□□ 0.88
USP39-211ENST00000465282 ANTXR1Q9H6X2 564 aa20.57■□□□□ 0.88
USP39-211ENST00000465282 TMOD2Q9NZR1 351 aa20.57■□□□□ 0.88
USP39-211ENST00000465282 PCDHAC2Q9Y5I4 1007 aa20.57■□□□□ 0.88
USP39-211ENST00000465282 ASTN2O75129 1339 aaPredicted RBP20.56■□□□□ 0.88
USP39-211ENST00000465282 PASKQ96RG2 1323 aa20.56■□□□□ 0.88
USP39-211ENST00000465282 GPR75-ASB3A0A0A6YYF3 556 aa20.56■□□□□ 0.88
USP39-211ENST00000465282 CERS3Q8IU89 383 aa20.56■□□□□ 0.88
USP39-211ENST00000465282 ZNF384Q8TF68 577 aa20.56■□□□□ 0.88
USP39-211ENST00000465282 NOL10Q9BSC4 688 aaKnown RBP20.56■□□□□ 0.88
USP39-211ENST00000465282 TDRD3Q9H7E2 651 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms