RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 WDR66Q8TBY9 1149 aa11.01□□□□□ -0.65
LDB1-203ENST00000461873 PRMT6Q96LA8 375 aaPredicted RBP11.01□□□□□ -0.65
LDB1-203ENST00000461873 CSRNP1Q96S65 589 aa11.01□□□□□ -0.65
LDB1-203ENST00000461873 RNF186Q9NXI6 227 aa11.01□□□□□ -0.65
LDB1-203ENST00000461873 LRRFIP2Q9Y608 721 aaKnown RBP11.01□□□□□ -0.65
LDB1-203ENST00000461873 ECM29Q5VYK3 1845 aa11□□□□□ -0.65
LDB1-203ENST00000461873 CASP8AP2Q9UKL3 1982 aa11□□□□□ -0.65
LDB1-203ENST00000461873 SRGAP3O43295 1099 aa11□□□□□ -0.65
LDB1-203ENST00000461873 CIAO1O76071 339 aa11□□□□□ -0.65
LDB1-203ENST00000461873 ALDH1A1P00352 501 aa11□□□□□ -0.65
LDB1-203ENST00000461873 BCAMP50895 628 aa11□□□□□ -0.65
LDB1-203ENST00000461873 INHBEP58166 350 aa11□□□□□ -0.65
LDB1-203ENST00000461873 RASA3Q14644 834 aa11□□□□□ -0.65
LDB1-203ENST00000461873 ATP2B3Q16720 1220 aa11□□□□□ -0.65
LDB1-203ENST00000461873 GORABQ5T7V8 394 aa11□□□□□ -0.65
LDB1-203ENST00000461873 FBXO33Q7Z6M2 555 aa11□□□□□ -0.65
LDB1-203ENST00000461873 DZIP1LQ8IYY4 767 aaKnown RBP11□□□□□ -0.65
LDB1-203ENST00000461873 ZGPATQ8N5A5 531 aaKnown RBP11□□□□□ -0.65
LDB1-203ENST00000461873 ABHD8Q96I13 439 aa11□□□□□ -0.65
LDB1-203ENST00000461873 TDRD3Q9H7E2 651 aaKnown RBP11□□□□□ -0.65
LDB1-203ENST00000461873 AKAP2Q9Y2D5 859 aa11□□□□□ -0.65
LDB1-203ENST00000461873 SUGT1Q9Y2Z0 365 aa11□□□□□ -0.65
LDB1-203ENST00000461873 MANSC4A6NHS7 340 aaPredicted RBP10.99□□□□□ -0.65
LDB1-203ENST00000461873 UNCXA6NJT0 531 aa10.99□□□□□ -0.65
LDB1-203ENST00000461873 TCP10L2B9ZVM9 353 aa10.99□□□□□ -0.65
LDB1-203ENST00000461873 HDLBPQ00341 1268 aaKnown RBP10.99□□□□□ -0.65
LDB1-203ENST00000461873 PTPN12Q05209 780 aaKnown RBP10.99□□□□□ -0.65
LDB1-203ENST00000461873 ZKSCAN2Q63HK3 967 aa10.99□□□□□ -0.65
LDB1-203ENST00000461873 SLF2Q8IX21 1173 aa10.99□□□□□ -0.65
LDB1-203ENST00000461873 ANKRD13AQ8IZ07 590 aa10.99□□□□□ -0.65
LDB1-203ENST00000461873 ZIC5Q96T25 663 aa10.99□□□□□ -0.65
LDB1-203ENST00000461873 ZNF70Q9UC06 446 aaPredicted RBP10.99□□□□□ -0.65
LDB1-203ENST00000461873 DENND2AQ9ULE3 1009 aa10.99□□□□□ -0.65
LDB1-203ENST00000461873 CSADQ9Y600 493 aa10.99□□□□□ -0.65
LDB1-203ENST00000461873 IRS2Q9Y4H2 1338 aa10.99□□□□□ -0.65
LDB1-203ENST00000461873 MYH13Q9UKX3 1938 aa10.98□□□□□ -0.65
LDB1-203ENST00000461873 GNAI2P04899 355 aa10.98□□□□□ -0.65
LDB1-203ENST00000461873 G3BP1Q13283 466 aaKnown RBP eCLIP10.98□□□□□ -0.65
LDB1-203ENST00000461873 OS9Q13438 667 aaPredicted RBP10.98□□□□□ -0.65
LDB1-203ENST00000461873 SPDYE2Q495Y8 402 aa10.98□□□□□ -0.65
LDB1-203ENST00000461873 INTS3Q68E01 1043 aaKnown RBP10.98□□□□□ -0.65
LDB1-203ENST00000461873 ATF7IPQ6VMQ6 1270 aa10.98□□□□□ -0.65
LDB1-203ENST00000461873 CLUAP1Q96AJ1 413 aa10.98□□□□□ -0.65
LDB1-203ENST00000461873 ZBED3Q96IU2 234 aaPredicted RBP10.98□□□□□ -0.65
LDB1-203ENST00000461873 SEMA3EO15041 775 aa10.97□□□□□ -0.65
LDB1-203ENST00000461873 LDHBP07195 334 aaKnown RBP10.97□□□□□ -0.65
LDB1-203ENST00000461873 ZBTB48P10074 688 aaPredicted RBP10.97□□□□□ -0.65
LDB1-203ENST00000461873 NBPF12Q5TAG4 269 aaPredicted RBP10.97□□□□□ -0.65
LDB1-203ENST00000461873 DCAF15Q66K64 600 aa10.97□□□□□ -0.65
LDB1-203ENST00000461873 SPTY2D1Q68D10 685 aaPredicted RBP10.97□□□□□ -0.65
LDB1-203ENST00000461873 VGLL2Q8N8G2 317 aa10.97□□□□□ -0.65
LDB1-203ENST00000461873 NEUROD6Q96NK8 337 aa10.97□□□□□ -0.65
LDB1-203ENST00000461873 MEIS3Q99687 375 aa10.97□□□□□ -0.65
LDB1-203ENST00000461873 MRIQ9BWK5 157 aa10.97□□□□□ -0.65
LDB1-203ENST00000461873 MCOLN1Q9GZU1 580 aa10.97□□□□□ -0.65
LDB1-203ENST00000461873 AK9Q5TCS8 1911 aa10.97□□□□□ -0.65
LDB1-203ENST00000461873 TBC1D8O95759 1140 aa10.96□□□□□ -0.65
LDB1-203ENST00000461873 FGFR2P21802 821 aa10.96□□□□□ -0.65
LDB1-203ENST00000461873 TM4SF4P48230 202 aa10.96□□□□□ -0.65
LDB1-203ENST00000461873 RFX5P48382 616 aaPredicted RBP10.96□□□□□ -0.65
LDB1-203ENST00000461873 C1QBPQ07021 282 aaKnown RBP10.96□□□□□ -0.65
LDB1-203ENST00000461873 MVPQ14764 893 aaKnown RBP10.96□□□□□ -0.65
LDB1-203ENST00000461873 SPRYD7Q5W111 196 aa10.96□□□□□ -0.65
LDB1-203ENST00000461873 HHIPL2Q6UWX4 724 aa10.96□□□□□ -0.65
LDB1-203ENST00000461873 DZIP1Q86YF9 867 aaKnown RBP10.96□□□□□ -0.65
LDB1-203ENST00000461873 COPRSQ9NQ92 184 aa10.96□□□□□ -0.65
LDB1-203ENST00000461873 ABCF2Q9UG63 623 aa10.96□□□□□ -0.65
LDB1-203ENST00000461873 PCDHAC2Q9Y5I4 1007 aa10.96□□□□□ -0.65
LDB1-203ENST00000461873 U3KPZ7 1027 aaPredicted RBP10.96□□□□□ -0.65
LDB1-203ENST00000461873 ZNF646O15015 1829 aaPredicted RBP10.95□□□□□ -0.66
LDB1-203ENST00000461873 BCAR3O75815 825 aa10.95□□□□□ -0.66
LDB1-203ENST00000461873 MS4A1P11836 297 aa10.95□□□□□ -0.66
LDB1-203ENST00000461873 TRIM27P14373 513 aa10.95□□□□□ -0.66
LDB1-203ENST00000461873 ARHGEF6Q15052 776 aa10.95□□□□□ -0.66
LDB1-203ENST00000461873 PKN2Q16513 984 aaKnown RBP10.95□□□□□ -0.66
LDB1-203ENST00000461873 MAP3K11Q16584 847 aa10.95□□□□□ -0.66
LDB1-203ENST00000461873 LDLRAD1Q5T700 205 aa10.95□□□□□ -0.66
LDB1-203ENST00000461873 CTU1Q7Z7A3 348 aaKnown RBP10.95□□□□□ -0.66
LDB1-203ENST00000461873 ITPRIPQ8IWB1 547 aa10.95□□□□□ -0.66
LDB1-203ENST00000461873 ZDHHC15Q96MV8 337 aa10.95□□□□□ -0.66
LDB1-203ENST00000461873 PA2G4Q9UQ80 394 aaKnown RBP10.95□□□□□ -0.66
LDB1-203ENST00000461873 USP2O75604 605 aaPredicted RBP10.94□□□□□ -0.66
LDB1-203ENST00000461873 MAP3K9P80192 1104 aa10.94□□□□□ -0.66
LDB1-203ENST00000461873 ATG9AQ7Z3C6 839 aa10.94□□□□□ -0.66
LDB1-203ENST00000461873 FAM83AQ86UY5 434 aa10.94□□□□□ -0.66
LDB1-203ENST00000461873 ZSCAN29Q8IWY8 852 aaPredicted RBP10.94□□□□□ -0.66
LDB1-203ENST00000461873 WNK4Q96J92 1243 aa10.94□□□□□ -0.66
LDB1-203ENST00000461873 NOL10Q9BSC4 688 aaKnown RBP10.94□□□□□ -0.66
LDB1-203ENST00000461873 TMEM39BQ9GZU3 492 aa10.94□□□□□ -0.66
LDB1-203ENST00000461873 ELP3Q9H9T3 547 aa10.94□□□□□ -0.66
LDB1-203ENST00000461873 FZD1Q9UP38 647 aa10.94□□□□□ -0.66
LDB1-203ENST00000461873 ARAP2Q8WZ64 1704 aa10.94□□□□□ -0.66
LDB1-203ENST00000461873 A0A1B0GUL7 405 aa10.93□□□□□ -0.66
LDB1-203ENST00000461873 FKTNO75072 461 aa10.93□□□□□ -0.66
LDB1-203ENST00000461873 TIMM10P62072 90 aa10.93□□□□□ -0.66
LDB1-203ENST00000461873 FKBP1CQ5VVH2 108 aa10.93□□□□□ -0.66
LDB1-203ENST00000461873 CCDC102BQ68D86 513 aa10.93□□□□□ -0.66
LDB1-203ENST00000461873 ERICH6Q7L0X2 663 aa10.93□□□□□ -0.66
LDB1-203ENST00000461873 OPTNQ96CV9 577 aa10.93□□□□□ -0.66
LDB1-203ENST00000461873 ZNF341Q9BYN7 854 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms