RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 CENPQQ7L2Z9 268 aaPredicted RBP16.87■□□□□ 0.29
CHRD-209ENST00000461120 GPC2Q8N158 579 aa16.87■□□□□ 0.29
CHRD-209ENST00000461120 FBXW7Q969H0 707 aa16.87■□□□□ 0.29
CHRD-209ENST00000461120 ZNF512BQ96KM6 892 aaPredicted RBP16.87■□□□□ 0.29
CHRD-209ENST00000461120 LNPKQ9C0E8 428 aa16.87■□□□□ 0.29
CHRD-209ENST00000461120 DENND2AQ9ULE3 1009 aa16.87■□□□□ 0.29
CHRD-209ENST00000461120 JAG2Q9Y219 1238 aa16.87■□□□□ 0.29
CHRD-209ENST00000461120 OTUD7AQ8TE49 926 aaPredicted RBP16.86■□□□□ 0.29
CHRD-209ENST00000461120 MYH13Q9UKX3 1938 aa16.86■□□□□ 0.29
CHRD-209ENST00000461120 MCAMP43121 646 aa16.85■□□□□ 0.29
CHRD-209ENST00000461120 SCARF1Q14162 830 aa16.85■□□□□ 0.29
CHRD-209ENST00000461120 RSBN1LQ6PCB5 846 aaPredicted RBP16.85■□□□□ 0.29
CHRD-209ENST00000461120 MXD3Q9BW11 206 aa16.85■□□□□ 0.29
CHRD-209ENST00000461120 HMG20BQ9P0W2 317 aa16.85■□□□□ 0.29
CHRD-209ENST00000461120 TLL2Q9Y6L7 1015 aa16.85■□□□□ 0.29
CHRD-209ENST00000461120 PDS5AQ29RF7 1337 aaKnown RBP16.85■□□□□ 0.29
CHRD-209ENST00000461120 SALL3Q9BXA9 1300 aa16.85■□□□□ 0.29
CHRD-209ENST00000461120 GMPSP49915 693 aaPredicted RBP16.84■□□□□ 0.29
CHRD-209ENST00000461120 FKBP1AP62942 108 aaKnown RBP16.84■□□□□ 0.29
CHRD-209ENST00000461120 PI16Q6UXB8 463 aa16.84■□□□□ 0.29
CHRD-209ENST00000461120 CERS5Q8N5B7 392 aa16.84■□□□□ 0.29
CHRD-209ENST00000461120 SPATA5Q8NB90 893 aa16.84■□□□□ 0.29
CHRD-209ENST00000461120 WDR66Q8TBY9 1149 aa16.84■□□□□ 0.29
CHRD-209ENST00000461120 GMLQ99445 158 aa16.84■□□□□ 0.29
CHRD-209ENST00000461120 ECHDC1Q9NTX5 307 aa16.84■□□□□ 0.29
CHRD-209ENST00000461120 ZBTB12Q9Y330 459 aaPredicted RBP16.84■□□□□ 0.29
CHRD-209ENST00000461120 ATP5JP18859 108 aa16.83■□□□□ 0.28
CHRD-209ENST00000461120 RPS12P25398 132 aaKnown RBP16.83■□□□□ 0.28
CHRD-209ENST00000461120 MFSD14BQ5SR56 506 aa16.83■□□□□ 0.28
CHRD-209ENST00000461120 AGBL3Q8NEM8 1001 aa16.83■□□□□ 0.28
CHRD-209ENST00000461120 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.83■□□□□ 0.28
CHRD-209ENST00000461120 TBC1D22AQ8WUA7 517 aa16.83■□□□□ 0.28
CHRD-209ENST00000461120 MYO3BQ8WXR4 1341 aa16.83■□□□□ 0.28
CHRD-209ENST00000461120 GPATCH3Q96I76 525 aa16.83■□□□□ 0.28
CHRD-209ENST00000461120 SNRKQ9NRH2 765 aa16.83■□□□□ 0.28
CHRD-209ENST00000461120 AKAP11Q9UKA4 1901 aa16.83■□□□□ 0.28
CHRD-209ENST00000461120 MX1P20591 662 aa16.82■□□□□ 0.28
CHRD-209ENST00000461120 SLC17A8Q8NDX2 589 aa16.82■□□□□ 0.28
CHRD-209ENST00000461120 TTC41PQ6P2S7 1318 aa16.81■□□□□ 0.28
CHRD-209ENST00000461120 SALL1Q9NSC2 1324 aa16.81■□□□□ 0.28
CHRD-209ENST00000461120 PDE4AP27815 886 aa16.81■□□□□ 0.28
CHRD-209ENST00000461120 ZAP70P43403 619 aa16.81■□□□□ 0.28
CHRD-209ENST00000461120 FXR1P51114 621 aaKnown RBP eCLIP16.81■□□□□ 0.28
CHRD-209ENST00000461120 SCNN1DP51172 638 aa16.81■□□□□ 0.28
CHRD-209ENST00000461120 TSHZ3Q63HK5 1081 aa16.81■□□□□ 0.28
CHRD-209ENST00000461120 DPF2Q92785 391 aa16.81■□□□□ 0.28
CHRD-209ENST00000461120 STAP2Q9UGK3 403 aa16.81■□□□□ 0.28
CHRD-209ENST00000461120 PDE1AP54750 535 aa16.8■□□□□ 0.28
CHRD-209ENST00000461120 GRIK5Q16478 980 aa16.8■□□□□ 0.28
CHRD-209ENST00000461120 BOLA2Q9H3K6 86 aa16.8■□□□□ 0.28
CHRD-209ENST00000461120 GPRC5DQ9NZD1 345 aa16.8■□□□□ 0.28
CHRD-209ENST00000461120 NDUFB9Q9Y6M9 179 aa16.8■□□□□ 0.28
CHRD-209ENST00000461120 SHTN1A0MZ66 631 aa16.79■□□□□ 0.28
CHRD-209ENST00000461120 CYP2E1P05181 493 aaPredicted RBP16.79■□□□□ 0.28
CHRD-209ENST00000461120 TBC1D9Q6ZT07 1266 aa16.79■□□□□ 0.28
CHRD-209ENST00000461120 KIAA0825Q8IV33 1275 aa16.79■□□□□ 0.28
CHRD-209ENST00000461120 PLEKHM2Q8IWE5 1019 aa16.79■□□□□ 0.28
CHRD-209ENST00000461120 ZGPATQ8N5A5 531 aaKnown RBP16.79■□□□□ 0.28
CHRD-209ENST00000461120 PI4K2BQ8TCG2 481 aa16.79■□□□□ 0.28
CHRD-209ENST00000461120 HHIPL1Q96JK4 782 aa16.79■□□□□ 0.28
CHRD-209ENST00000461120 HAUS7Q99871 368 aa16.79■□□□□ 0.28
CHRD-209ENST00000461120 CNOT7Q9UIV1 285 aaKnown RBP16.79■□□□□ 0.28
CHRD-209ENST00000461120 SUGT1Q9Y2Z0 365 aa16.79■□□□□ 0.28
CHRD-209ENST00000461120 A0A0C4DFX4 3053 aa16.79■□□□□ 0.28
CHRD-209ENST00000461120 F8W031 263 aaPredicted RBP16.78■□□□□ 0.28
CHRD-209ENST00000461120 ERC2O15083 957 aa16.78■□□□□ 0.28
CHRD-209ENST00000461120 GLRX3O76003 335 aaKnown RBP16.78■□□□□ 0.28
CHRD-209ENST00000461120 USP17L8P0C7I0 530 aa16.78■□□□□ 0.28
CHRD-209ENST00000461120 LMOD1P29536 600 aaPredicted RBP16.78■□□□□ 0.28
CHRD-209ENST00000461120 EPS15P42566 896 aa16.78■□□□□ 0.28
CHRD-209ENST00000461120 MICALL2Q8IY33 904 aa16.78■□□□□ 0.28
CHRD-209ENST00000461120 DNAJC2Q99543 621 aaKnown RBP16.78■□□□□ 0.28
CHRD-209ENST00000461120 ABCF2Q9UG63 623 aa16.78■□□□□ 0.28
CHRD-209ENST00000461120 AOX1Q06278 1338 aa16.77■□□□□ 0.28
CHRD-209ENST00000461120 LDHBP07195 334 aaKnown RBP16.77■□□□□ 0.28
CHRD-209ENST00000461120 PRDX5P30044 214 aa16.77■□□□□ 0.28
CHRD-209ENST00000461120 ZNF280AP59817 542 aaPredicted RBP16.77■□□□□ 0.28
CHRD-209ENST00000461120 NOGQ13253 232 aa16.77■□□□□ 0.28
CHRD-209ENST00000461120 SPTY2D1Q68D10 685 aaPredicted RBP16.77■□□□□ 0.28
CHRD-209ENST00000461120 OSBPL3Q9H4L5 887 aa16.77■□□□□ 0.28
CHRD-209ENST00000461120 ANTXR1Q9H6X2 564 aa16.77■□□□□ 0.28
CHRD-209ENST00000461120 PIH1D3Q9NQM4 214 aaKnown RBP16.77■□□□□ 0.28
CHRD-209ENST00000461120 TTF2Q9UNY4 1162 aaKnown RBP16.77■□□□□ 0.28
CHRD-209ENST00000461120 H7C1D1 291 aa16.76■□□□□ 0.27
CHRD-209ENST00000461120 GOLIM4O00461 696 aa16.76■□□□□ 0.27
CHRD-209ENST00000461120 MMP14P50281 582 aa16.76■□□□□ 0.27
CHRD-209ENST00000461120 CST9Q5W186 159 aa16.76■□□□□ 0.27
CHRD-209ENST00000461120 ERICH6Q7L0X2 663 aa16.76■□□□□ 0.27
CHRD-209ENST00000461120 CTU1Q7Z7A3 348 aaKnown RBP16.76■□□□□ 0.27
CHRD-209ENST00000461120 OGFOD1Q8N543 542 aa16.76■□□□□ 0.27
CHRD-209ENST00000461120 EDC3Q96F86 508 aaKnown RBP16.76■□□□□ 0.27
CHRD-209ENST00000461120 PAG1Q9NWQ8 432 aa16.76■□□□□ 0.27
CHRD-209ENST00000461120 LRP2BPQ9P2M1 347 aa16.76■□□□□ 0.27
CHRD-209ENST00000461120 HDAC9Q9UKV0 1011 aa16.76■□□□□ 0.27
CHRD-209ENST00000461120 TTF1Q15361 905 aaPredicted RBP16.75■□□□□ 0.27
CHRD-209ENST00000461120 SAPCD2Q86UD0 394 aa16.75■□□□□ 0.27
CHRD-209ENST00000461120 ADARB2Q9NS39 739 aaKnown RBP16.75■□□□□ 0.27
CHRD-209ENST00000461120 SAGE1Q9NXZ1 904 aa16.75■□□□□ 0.27
CHRD-209ENST00000461120 MAST3O60307 1309 aa16.74■□□□□ 0.27
CHRD-209ENST00000461120 HDLBPQ00341 1268 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms