RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 PAK6Q9NQU5 681 aaPredicted RBP17.65■□□□□ 0.42
PCOLCE-202ENST00000460002 CSADQ9Y600 493 aa17.65■□□□□ 0.42
PCOLCE-202ENST00000460002 IRF6O14896 467 aa17.64■□□□□ 0.41
PCOLCE-202ENST00000460002 INHAP05111 366 aa17.64■□□□□ 0.41
PCOLCE-202ENST00000460002 ELNP15502 786 aa17.64■□□□□ 0.41
PCOLCE-202ENST00000460002 KRT24Q2M2I5 525 aa17.64■□□□□ 0.41
PCOLCE-202ENST00000460002 ADCY3O60266 1144 aa17.63■□□□□ 0.41
PCOLCE-202ENST00000460002 HSP90B1P14625 803 aaKnown RBP17.63■□□□□ 0.41
PCOLCE-202ENST00000460002 SNAPC2Q13487 334 aa17.63■□□□□ 0.41
PCOLCE-202ENST00000460002 BSDC1Q9NW68 430 aaPredicted RBP17.63■□□□□ 0.41
PCOLCE-202ENST00000460002 SNCAIPQ9Y6H5 919 aa17.63■□□□□ 0.41
PCOLCE-202ENST00000460002 COL2A1P02458 1487 aaPredicted RBP17.63■□□□□ 0.41
PCOLCE-202ENST00000460002 TNFRSF10AO00220 468 aa17.62■□□□□ 0.41
PCOLCE-202ENST00000460002 PLEKHF1Q96S99 279 aa17.62■□□□□ 0.41
PCOLCE-202ENST00000460002 CDC5LQ99459 802 aaKnown RBP17.62■□□□□ 0.41
PCOLCE-202ENST00000460002 CDX2Q99626 313 aaPredicted RBP17.62■□□□□ 0.41
PCOLCE-202ENST00000460002 LEMD3Q9Y2U8 911 aa17.62■□□□□ 0.41
PCOLCE-202ENST00000460002 FAM205AQ6ZU69 1335 aa17.62■□□□□ 0.41
PCOLCE-202ENST00000460002 ERO1BQ86YB8 467 aa17.61■□□□□ 0.41
PCOLCE-202ENST00000460002 CD209Q9NNX6 404 aa17.61■□□□□ 0.41
PCOLCE-202ENST00000460002 PCCAP05165 728 aaPredicted RBP17.6■□□□□ 0.41
PCOLCE-202ENST00000460002 NEFMP07197 916 aa17.6■□□□□ 0.41
PCOLCE-202ENST00000460002 FCGRTP55899 365 aa17.6■□□□□ 0.41
PCOLCE-202ENST00000460002 SPDYE2Q495Y8 402 aa17.6■□□□□ 0.41
PCOLCE-202ENST00000460002 ZNF70Q9UC06 446 aaPredicted RBP17.6■□□□□ 0.41
PCOLCE-202ENST00000460002 PDHXO00330 501 aa17.59■□□□□ 0.41
PCOLCE-202ENST00000460002 FLT3LGP49771 235 aa17.59■□□□□ 0.41
PCOLCE-202ENST00000460002 RBM5P52756 815 aaKnown RBP eCLIP17.59■□□□□ 0.41
PCOLCE-202ENST00000460002 TNFAIP1Q13829 316 aa17.59■□□□□ 0.41
PCOLCE-202ENST00000460002 ZNF697Q5TEC3 545 aa17.59■□□□□ 0.41
PCOLCE-202ENST00000460002 TMEM39BQ9GZU3 492 aa17.59■□□□□ 0.41
PCOLCE-202ENST00000460002 TMEM265A0A087WTH1 108 aa17.58■□□□□ 0.4
PCOLCE-202ENST00000460002 BCRP11274 1271 aa17.58■□□□□ 0.4
PCOLCE-202ENST00000460002 PPP2R1AP30153 589 aa17.58■□□□□ 0.4
PCOLCE-202ENST00000460002 PPIL2Q13356 520 aa17.58■□□□□ 0.4
PCOLCE-202ENST00000460002 ANKRD23Q86SG2 305 aa17.58■□□□□ 0.4
PCOLCE-202ENST00000460002 ANKLE1Q8NAG6 615 aa17.58■□□□□ 0.4
PCOLCE-202ENST00000460002 PXYLP1Q8TE99 480 aa17.58■□□□□ 0.4
PCOLCE-202ENST00000460002 ZKSCAN4Q969J2 545 aaPredicted RBP17.58■□□□□ 0.4
PCOLCE-202ENST00000460002 BABAM1Q9NWV8 329 aa17.58■□□□□ 0.4
PCOLCE-202ENST00000460002 LAMA2P24043 3122 aaKnown RBP17.57■□□□□ 0.4
PCOLCE-202ENST00000460002 CTSWP56202 376 aa17.57■□□□□ 0.4
PCOLCE-202ENST00000460002 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.57■□□□□ 0.4
PCOLCE-202ENST00000460002 NBPF3Q9H094 633 aa17.57■□□□□ 0.4
PCOLCE-202ENST00000460002 GREM2Q9H772 168 aa17.57■□□□□ 0.4
PCOLCE-202ENST00000460002 TDRD3Q9H7E2 651 aaKnown RBP17.57■□□□□ 0.4
PCOLCE-202ENST00000460002 SPEF2Q9C093 1822 aa17.56■□□□□ 0.4
PCOLCE-202ENST00000460002 TCP10L2B9ZVM9 353 aa17.56■□□□□ 0.4
PCOLCE-202ENST00000460002 MDM2Q00987 491 aaPredicted RBP17.56■□□□□ 0.4
PCOLCE-202ENST00000460002 HDGFL1Q5TGJ6 251 aa17.56■□□□□ 0.4
PCOLCE-202ENST00000460002 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.56■□□□□ 0.4
PCOLCE-202ENST00000460002 MAP3K12Q12852 859 aa17.55■□□□□ 0.4
PCOLCE-202ENST00000460002 IRF5Q13568 498 aa17.55■□□□□ 0.4
PCOLCE-202ENST00000460002 TJAP1Q5JTD0 557 aa17.55■□□□□ 0.4
PCOLCE-202ENST00000460002 CCDC191Q8NCU4 936 aa17.55■□□□□ 0.4
PCOLCE-202ENST00000460002 TTLL11Q8NHH1 800 aa17.55■□□□□ 0.4
PCOLCE-202ENST00000460002 MYLIPQ8WY64 445 aa17.55■□□□□ 0.4
PCOLCE-202ENST00000460002 WRNIP1Q96S55 665 aa17.55■□□□□ 0.4
PCOLCE-202ENST00000460002 MYD88Q99836 296 aa17.55■□□□□ 0.4
PCOLCE-202ENST00000460002 C11orf49Q9H6J7 331 aa17.55■□□□□ 0.4
PCOLCE-202ENST00000460002 DBF4Q9UBU7 674 aaPredicted RBP17.55■□□□□ 0.4
PCOLCE-202ENST00000460002 JAG2Q9Y219 1238 aa17.55■□□□□ 0.4
PCOLCE-202ENST00000460002 MOGSQ13724 837 aa17.54■□□□□ 0.4
PCOLCE-202ENST00000460002 RIC3Q7Z5B4 369 aa17.54■□□□□ 0.4
PCOLCE-202ENST00000460002 SEMA6BQ9H3T3 888 aa17.54■□□□□ 0.4
PCOLCE-202ENST00000460002 CDH23Q9H251 3354 aa17.53■□□□□ 0.4
PCOLCE-202ENST00000460002 ARAP2Q8WZ64 1704 aa17.53■□□□□ 0.4
PCOLCE-202ENST00000460002 SNAP23O00161 211 aa17.53■□□□□ 0.4
PCOLCE-202ENST00000460002 CYP2C8P10632 490 aa17.53■□□□□ 0.4
PCOLCE-202ENST00000460002 FKBP1AP62942 108 aaKnown RBP17.53■□□□□ 0.4
PCOLCE-202ENST00000460002 HYPKQ9NX55 129 aa17.53■□□□□ 0.4
PCOLCE-202ENST00000460002 CWC25Q9NXE8 425 aaPredicted RBP17.53■□□□□ 0.4
PCOLCE-202ENST00000460002 MGAMO43451 1857 aa17.52■□□□□ 0.4
PCOLCE-202ENST00000460002 PFASO15067 1338 aa17.52■□□□□ 0.4
PCOLCE-202ENST00000460002 PPATQ06203 517 aa17.52■□□□□ 0.4
PCOLCE-202ENST00000460002 ANKRD2Q9GZV1 360 aa17.52■□□□□ 0.4
PCOLCE-202ENST00000460002 DDX60LQ5H9U9 1706 aaKnown RBP17.51■□□□□ 0.39
PCOLCE-202ENST00000460002 PARK7Q99497 189 aaKnown RBP17.51■□□□□ 0.39
PCOLCE-202ENST00000460002 TAOK2Q9UL54 1235 aa17.51■□□□□ 0.39
PCOLCE-202ENST00000460002 IL1R1P14778 569 aa17.5■□□□□ 0.39
PCOLCE-202ENST00000460002 KCNJ4P48050 445 aa17.5■□□□□ 0.39
PCOLCE-202ENST00000460002 TNNI2P48788 182 aa17.5■□□□□ 0.39
PCOLCE-202ENST00000460002 DZIP1LQ8IYY4 767 aaKnown RBP17.5■□□□□ 0.39
PCOLCE-202ENST00000460002 KCNH4Q9UQ05 1017 aa17.5■□□□□ 0.39
PCOLCE-202ENST00000460002 TNPO2O14787 897 aaKnown RBP17.49■□□□□ 0.39
PCOLCE-202ENST00000460002 FOSL2P15408 326 aa17.49■□□□□ 0.39
PCOLCE-202ENST00000460002 IGHMBP2P38935 993 aaKnown RBP17.49■□□□□ 0.39
PCOLCE-202ENST00000460002 GOLGA2Q08379 1002 aa17.49■□□□□ 0.39
PCOLCE-202ENST00000460002 GPAT2Q6NUI2 795 aa17.49■□□□□ 0.39
PCOLCE-202ENST00000460002 TTYH1Q9H313 450 aaPredicted RBP17.49■□□□□ 0.39
PCOLCE-202ENST00000460002 MAPK8IP3Q9UPT6 1336 aa17.48■□□□□ 0.39
PCOLCE-202ENST00000460002 C15orf52Q6ZUT6 534 aaKnown RBP17.48■□□□□ 0.39
PCOLCE-202ENST00000460002 USP38Q8NB14 1042 aa17.48■□□□□ 0.39
PCOLCE-202ENST00000460002 PHAXQ9H814 394 aaKnown RBP17.48■□□□□ 0.39
PCOLCE-202ENST00000460002 SERPINA10Q9UK55 444 aa17.48■□□□□ 0.39
PCOLCE-202ENST00000460002 SYNGAP1Q96PV0 1343 aa17.47■□□□□ 0.39
PCOLCE-202ENST00000460002 CHL1O00533 1208 aa17.47■□□□□ 0.39
PCOLCE-202ENST00000460002 INPP5BP32019 993 aa17.47■□□□□ 0.39
PCOLCE-202ENST00000460002 RIPK4P57078 832 aa17.47■□□□□ 0.39
PCOLCE-202ENST00000460002 CHRNDQ07001 517 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms