RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 R3HDMLQ9H3Y0 253 aa18.08■□□□□ 0.48
USP39-206ENST00000448971 HDAC9Q9UKV0 1011 aa18.08■□□□□ 0.48
USP39-206ENST00000448971 SASH1O94885 1247 aa18.07■□□□□ 0.48
USP39-206ENST00000448971 IFIT1P09914 478 aaKnown RBP18.07■□□□□ 0.48
USP39-206ENST00000448971 IL15P40933 162 aaPredicted RBP18.07■□□□□ 0.48
USP39-206ENST00000448971 GYG1P46976 350 aa18.07■□□□□ 0.48
USP39-206ENST00000448971 GTF2IP78347 998 aa18.07■□□□□ 0.48
USP39-206ENST00000448971 TTLL12Q14166 644 aaPredicted RBP18.07■□□□□ 0.48
USP39-206ENST00000448971 MVPQ14764 893 aaKnown RBP18.07■□□□□ 0.48
USP39-206ENST00000448971 COPRSQ9NQ92 184 aa18.07■□□□□ 0.48
USP39-206ENST00000448971 MKI67P46013 3256 aaKnown RBP18.07■□□□□ 0.48
USP39-206ENST00000448971 PNMA6EA0A0J9YXQ4 647 aa18.06■□□□□ 0.48
USP39-206ENST00000448971 SLC5A1P13866 664 aa18.06■□□□□ 0.48
USP39-206ENST00000448971 HIBADHP31937 336 aaKnown RBP18.06■□□□□ 0.48
USP39-206ENST00000448971 NF2P35240 595 aa18.06■□□□□ 0.48
USP39-206ENST00000448971 MKRN3Q13064 507 aaKnown RBP18.06■□□□□ 0.48
USP39-206ENST00000448971 CAVIN4Q5BKX8 364 aa18.06■□□□□ 0.48
USP39-206ENST00000448971 ATG9AQ7Z3C6 839 aa18.06■□□□□ 0.48
USP39-206ENST00000448971 CEP126Q9P2H0 1117 aa18.06■□□□□ 0.48
USP39-206ENST00000448971 COG6Q9Y2V7 657 aa18.06■□□□□ 0.48
USP39-206ENST00000448971 HTTP42858 3142 aa18.06■□□□□ 0.48
USP39-206ENST00000448971 ZBTB7BO15156 539 aaPredicted RBP18.05■□□□□ 0.48
USP39-206ENST00000448971 IL1R1P14778 569 aa18.05■□□□□ 0.48
USP39-206ENST00000448971 KIAA0825Q8IV33 1275 aa18.05■□□□□ 0.48
USP39-206ENST00000448971 DDX19BQ9UMR2 479 aa18.05■□□□□ 0.48
USP39-206ENST00000448971 JAG2Q9Y219 1238 aa18.05■□□□□ 0.48
USP39-206ENST00000448971 CENPFP49454 3210 aa18.05■□□□□ 0.48
USP39-206ENST00000448971 FRAT2O75474 233 aaPredicted RBP18.04■□□□□ 0.48
USP39-206ENST00000448971 SREBF2Q12772 1141 aa18.04■□□□□ 0.48
USP39-206ENST00000448971 PRKG1Q13976 671 aa18.04■□□□□ 0.48
USP39-206ENST00000448971 ATP2B3Q16720 1220 aa18.04■□□□□ 0.48
USP39-206ENST00000448971 PRPF38BQ5VTL8 546 aaKnown RBP18.04■□□□□ 0.48
USP39-206ENST00000448971 SPRYD7Q5W111 196 aa18.04■□□□□ 0.48
USP39-206ENST00000448971 ARMC9Q7Z3E5 817 aa18.04■□□□□ 0.48
USP39-206ENST00000448971 APOBEC3FQ8IUX4 373 aaKnown RBP18.04■□□□□ 0.48
USP39-206ENST00000448971 LPIN2Q92539 896 aa18.04■□□□□ 0.48
USP39-206ENST00000448971 POLA2Q14181 598 aa18.03■□□□□ 0.48
USP39-206ENST00000448971 FBXO46Q6PJ61 603 aaPredicted RBP18.03■□□□□ 0.48
USP39-206ENST00000448971 FAM84BQ96KN1 310 aaPredicted RBP18.03■□□□□ 0.48
USP39-206ENST00000448971 FZD1Q9UP38 647 aa18.03■□□□□ 0.48
USP39-206ENST00000448971 ARAP2Q8WZ64 1704 aa18.03■□□□□ 0.48
USP39-206ENST00000448971 FKTNO75072 461 aa18.02■□□□□ 0.48
USP39-206ENST00000448971 FGFR2P21802 821 aa18.02■□□□□ 0.48
USP39-206ENST00000448971 OS9Q13438 667 aaPredicted RBP18.02■□□□□ 0.48
USP39-206ENST00000448971 MAP3K11Q16584 847 aa18.02■□□□□ 0.48
USP39-206ENST00000448971 CERS5Q8N5B7 392 aa18.02■□□□□ 0.48
USP39-206ENST00000448971 MTMR14Q8NCE2 650 aa18.02■□□□□ 0.48
USP39-206ENST00000448971 DEFB129Q9H1M3 183 aa18.02■□□□□ 0.48
USP39-206ENST00000448971 ANGEL1Q9UNK9 670 aaKnown RBP18.02■□□□□ 0.48
USP39-206ENST00000448971 IQSEC3Q9UPP2 1182 aaPredicted RBP18.02■□□□□ 0.48
USP39-206ENST00000448971 CHAF1AQ13111 956 aaPredicted RBP18.01■□□□□ 0.47
USP39-206ENST00000448971 G3BP1Q13283 466 aaKnown RBP eCLIP18.01■□□□□ 0.47
USP39-206ENST00000448971 TDRD7Q8NHU6 1098 aaKnown RBP18.01■□□□□ 0.47
USP39-206ENST00000448971 CHMP4BQ9H444 224 aaKnown RBP18.01■□□□□ 0.47
USP39-206ENST00000448971 KIAA0100Q14667 2235 aaKnown RBP18■□□□□ 0.47
USP39-206ENST00000448971 F8W031 263 aaPredicted RBP18■□□□□ 0.47
USP39-206ENST00000448971 BCAMP50895 628 aa18■□□□□ 0.47
USP39-206ENST00000448971 INHBEP58166 350 aa18■□□□□ 0.47
USP39-206ENST00000448971 ATP8B2P98198 1209 aa18■□□□□ 0.47
USP39-206ENST00000448971 TFCP2Q12800 502 aa18■□□□□ 0.47
USP39-206ENST00000448971 PDE3AQ14432 1141 aa18■□□□□ 0.47
USP39-206ENST00000448971 C20orf194Q5TEA3 1177 aa18■□□□□ 0.47
USP39-206ENST00000448971 CEP85Q6P2H3 762 aa18■□□□□ 0.47
USP39-206ENST00000448971 PCDHAC2Q9Y5I4 1007 aa18■□□□□ 0.47
USP39-206ENST00000448971 ALDH1A1P00352 501 aa17.99■□□□□ 0.47
USP39-206ENST00000448971 DLGAP5Q15398 846 aa17.99■□□□□ 0.47
USP39-206ENST00000448971 MFSD14BQ5SR56 506 aa17.99■□□□□ 0.47
USP39-206ENST00000448971 FBXO33Q7Z6M2 555 aa17.99■□□□□ 0.47
USP39-206ENST00000448971 IFNL1Q8IU54 200 aa17.99■□□□□ 0.47
USP39-206ENST00000448971 SSH3Q8TE77 659 aa17.99■□□□□ 0.47
USP39-206ENST00000448971 SLC10A4Q96EP9 437 aa17.99■□□□□ 0.47
USP39-206ENST00000448971 AKAP2Q9Y2D5 859 aa17.99■□□□□ 0.47
USP39-206ENST00000448971 FAM205AQ6ZU69 1335 aa17.98■□□□□ 0.47
USP39-206ENST00000448971 SURF6O75683 361 aaKnown RBP17.98■□□□□ 0.47
USP39-206ENST00000448971 RRP1P56182 461 aaKnown RBP17.98■□□□□ 0.47
USP39-206ENST00000448971 FKBP1AP62942 108 aaKnown RBP17.98■□□□□ 0.47
USP39-206ENST00000448971 MKRN4PQ13434 485 aaPredicted RBP17.98■□□□□ 0.47
USP39-206ENST00000448971 CLMNQ96JQ2 1002 aa17.98■□□□□ 0.47
USP39-206ENST00000448971 BRCA2P51587 3418 aa17.98■□□□□ 0.47
USP39-206ENST00000448971 MYH13Q9UKX3 1938 aa17.98■□□□□ 0.47
USP39-206ENST00000448971 SSC5DA1L4H1 1573 aa17.97■□□□□ 0.47
USP39-206ENST00000448971 COL1A1P02452 1464 aaPredicted RBP17.97■□□□□ 0.47
USP39-206ENST00000448971 A0A1B0GUL7 405 aa17.97■□□□□ 0.47
USP39-206ENST00000448971 MANSC4A6NHS7 340 aaPredicted RBP17.97■□□□□ 0.47
USP39-206ENST00000448971 UNCXA6NJT0 531 aa17.97■□□□□ 0.47
USP39-206ENST00000448971 PRMT6Q96LA8 375 aaPredicted RBP17.97■□□□□ 0.47
USP39-206ENST00000448971 GNL3LQ9NVN8 582 aaKnown RBP17.97■□□□□ 0.47
USP39-206ENST00000448971 AOX1Q06278 1338 aa17.97■□□□□ 0.47
USP39-206ENST00000448971 IGF2BP3O00425 579 aaKnown RBP eCLIP17.96■□□□□ 0.47
USP39-206ENST00000448971 ZBTB48P10074 688 aaPredicted RBP17.96■□□□□ 0.47
USP39-206ENST00000448971 ADORA1P30542 326 aa17.96■□□□□ 0.47
USP39-206ENST00000448971 TBC1D22AQ8WUA7 517 aa17.96■□□□□ 0.47
USP39-206ENST00000448971 WNK4Q96J92 1243 aa17.96■□□□□ 0.47
USP39-206ENST00000448971 PPP2R3BQ9Y5P8 575 aa17.96■□□□□ 0.47
USP39-206ENST00000448971 SPDYE2BA6NHP3 402 aa17.95■□□□□ 0.46
USP39-206ENST00000448971 PPP1R12BO60237 982 aaPredicted RBP17.95■□□□□ 0.46
USP39-206ENST00000448971 HMMRO75330 724 aa17.95■□□□□ 0.46
USP39-206ENST00000448971 USP2O75604 605 aaPredicted RBP17.95■□□□□ 0.46
USP39-206ENST00000448971 SPDYE6P0CI01 402 aa17.95■□□□□ 0.46
USP39-206ENST00000448971 CFAP100Q494V2 611 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms