RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 CCDC174Q6PII3 467 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 SLC30A9Q6PML9 568 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 ARHGAP27Q6ZUM4 889 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 NUP133Q8WUM0 1156 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 ALS2CR12Q96Q35 445 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 LNPKQ9C0E8 428 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 PDGFDQ9GZP0 370 aaPredicted RBP9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 ZNF304Q9HCX3 659 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 SLC26A4O43511 780 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 LDHCP07864 332 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 KCTD2Q14681 263 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 VPS53Q5VIR6 699 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 DCLK2Q8N568 766 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 FRS2Q8WU20 508 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 SPDL1Q96EA4 605 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 JPH4Q96JJ6 628 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 RPS6KC1Q96S38 1066 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 TTC12Q9H892 705 aaPredicted RBP9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 RTEL1Q9NZ71 1219 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 TUBGCP4Q9UGJ1 667 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 ITGB1BP2Q9UKP3 347 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 SSX2IPQ9Y2D8 614 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 PIK3R4Q99570 1358 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 POLR3GO15318 223 aaPredicted RBP9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 SGTAO43765 313 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 KDM1AO60341 852 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 INPP5BP32019 993 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 NUP160Q12769 1436 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 KCNB1Q14721 858 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 NAA30Q147X3 362 aaPredicted RBP9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 MYBPC3Q14896 1274 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 WTAPQ15007 396 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 RABL6Q3YEC7 729 aaPredicted RBP9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 DPY19L2Q6NUT2 758 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 CABS1Q96KC9 395 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 ZNF512BQ96KM6 892 aaPredicted RBP9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 C2orf49Q9BVC5 232 aaPredicted RBP9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 PCDHGC5Q9Y5F6 944 aa9.86□□□□□ -0.83
MCF2L2-203ENST00000447025 IQGAP2Q13576 1575 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 SPATA31D1Q6ZQQ2 1576 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 ZMYM3Q14202 1370 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 DYTNA2CJ06 578 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 CHL1O00533 1208 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 SPTLC2O15270 562 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 RNF8O76064 485 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 SLC4A2P04920 1241 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 CUL4BQ13620 913 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 KANK4Q5T7N3 995 aaPredicted RBP9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 FAM117BQ6P1L5 589 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 LRSAM1Q6UWE0 723 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 THEMISQ8N1K5 641 aaPredicted RBP9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 C17orf53Q8N3J3 647 aaPredicted RBP9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 ANKRD24Q8TF21 1146 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 ZFAND2BQ8WV99 257 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 ERP27Q96DN0 273 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 ERO1AQ96HE7 468 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 TNMDQ9H2S6 317 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 PRELID1Q9Y255 219 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 PTPRGP23470 1445 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 VPS8Q8N3P4 1428 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 LINC00854A0A1B0GVQ3 168 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 CYP27B1O15528 508 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 CAVIN2O95810 425 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 ZFXP17010 805 aaPredicted RBP9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 CEP135Q66GS9 1140 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 CAVIN1Q6NZI2 390 aaKnown RBP9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 ZNF280CQ8ND82 737 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 WHAMMQ8TF30 809 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 TANGO6Q9C0B7 1094 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 LUC7LQ9NQ29 371 aaKnown RBP9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 KIAA1468Q9P260 1216 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 EXOC6BQ9Y2D4 811 aa9.85□□□□□ -0.83
MCF2L2-203ENST00000447025 KIAA0586Q9BVV6 1533 aa9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 ALOX15P16050 662 aaPredicted RBP9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 TCF7P36402 384 aaPredicted RBP9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 LMAN1P49257 510 aa9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 PSMD7P51665 324 aa9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 ARPC4P59998 168 aa9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 GUCY1B3Q02153 619 aa9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 DMPKQ09013 629 aa9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 COX10Q12887 443 aa9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 THEMIS2Q5TEJ8 643 aa9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 CCSAPQ6IQ19 270 aaPredicted RBP9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 RELL1Q8IUW5 271 aa9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 CTNNBL1Q8WYA6 563 aaPredicted RBP9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 RTF1Q92541 710 aaKnown RBP9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 CDHR1Q96JP9 859 aa9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 SYNCQ9H7C4 482 aa9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 MRS2Q9HD23 443 aa9.84□□□□□ -0.83
MCF2L2-203ENST00000447025 PIK3CAP42336 1068 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 CCT8P50990 548 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 ITIH3Q06033 890 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 FAM69CQ0P6D2 419 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 NKX1-1Q15270 411 aaPredicted RBP9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 TLDC1Q6P9B6 456 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 RSPH3Q86UC2 560 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 LARGE2Q8N3Y3 721 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 LMBR1Q8WVP7 490 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms