RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 ZBTB7BO15156 539 aaPredicted RBP9.36□□□□□ -0.91
COPS3-203ENST00000439936 GNAI3P08754 354 aa9.36□□□□□ -0.91
COPS3-203ENST00000439936 DNAJB2P25686 324 aa9.36□□□□□ -0.91
COPS3-203ENST00000439936 SLC4A3P48751 1232 aa9.36□□□□□ -0.91
COPS3-203ENST00000439936 GPSM2P81274 684 aa9.36□□□□□ -0.91
COPS3-203ENST00000439936 AMHR2Q16671 573 aa9.36□□□□□ -0.91
COPS3-203ENST00000439936 CCDC57Q2TAC2 916 aa9.36□□□□□ -0.91
COPS3-203ENST00000439936 RABL6Q3YEC7 729 aaPredicted RBP9.36□□□□□ -0.91
COPS3-203ENST00000439936 ZNF594Q96JF6 807 aaPredicted RBP9.36□□□□□ -0.91
COPS3-203ENST00000439936 PSMD1Q99460 953 aa9.36□□□□□ -0.91
COPS3-203ENST00000439936 RTFDC1Q9BY42 306 aaPredicted RBP9.36□□□□□ -0.91
COPS3-203ENST00000439936 TAOK3Q9H2K8 898 aa9.36□□□□□ -0.91
COPS3-203ENST00000439936 ZNF277Q9NRM2 450 aaPredicted RBP9.36□□□□□ -0.91
COPS3-203ENST00000439936 MINPP1Q9UNW1 487 aa9.36□□□□□ -0.91
COPS3-203ENST00000439936 HDAC5Q9UQL6 1122 aa9.36□□□□□ -0.91
COPS3-203ENST00000439936 DICER1Q9UPY3 1922 aaKnown RBP9.35□□□□□ -0.91
COPS3-203ENST00000439936 SNED1Q8TER0 1413 aa9.35□□□□□ -0.91
COPS3-203ENST00000439936 WTIPA6NIX2 430 aaPredicted RBP9.35□□□□□ -0.91
COPS3-203ENST00000439936 MS4A1P11836 297 aa9.35□□□□□ -0.91
COPS3-203ENST00000439936 IGHMBP2P38935 993 aaKnown RBP9.35□□□□□ -0.91
COPS3-203ENST00000439936 COPS2P61201 443 aa9.35□□□□□ -0.91
COPS3-203ENST00000439936 PDE4DQ08499 809 aa9.35□□□□□ -0.91
COPS3-203ENST00000439936 DPP8Q6V1X1 898 aaPredicted RBP9.35□□□□□ -0.91
COPS3-203ENST00000439936 FTSJ3Q8IY81 847 aaKnown RBP9.35□□□□□ -0.91
COPS3-203ENST00000439936 RBM46Q8TBY0 533 aaKnown RBP9.35□□□□□ -0.91
COPS3-203ENST00000439936 POLLQ9UGP5 575 aa9.35□□□□□ -0.91
COPS3-203ENST00000439936 LRRFIP2Q9Y608 721 aaKnown RBP9.35□□□□□ -0.91
COPS3-203ENST00000439936 SPEF2Q9C093 1822 aa9.34□□□□□ -0.91
COPS3-203ENST00000439936 UTRNP46939 3433 aa9.34□□□□□ -0.91
COPS3-203ENST00000439936 C6orf229H3BNL8 230 aa9.34□□□□□ -0.91
COPS3-203ENST00000439936 IARSP41252 1262 aaKnown RBP9.34□□□□□ -0.91
COPS3-203ENST00000439936 C20orf194Q5TEA3 1177 aa9.34□□□□□ -0.91
COPS3-203ENST00000439936 LDHAL6AQ6ZMR3 332 aa9.34□□□□□ -0.91
COPS3-203ENST00000439936 ITPRIPQ8IWB1 547 aa9.34□□□□□ -0.91
COPS3-203ENST00000439936 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.34□□□□□ -0.91
COPS3-203ENST00000439936 SUPT20HQ8NEM7 779 aa9.34□□□□□ -0.91
COPS3-203ENST00000439936 MPHOSPH8Q99549 860 aa9.34□□□□□ -0.91
COPS3-203ENST00000439936 PRR14Q9BWN1 585 aa9.34□□□□□ -0.91
COPS3-203ENST00000439936 PUS3Q9BZE2 481 aaKnown RBP9.34□□□□□ -0.91
COPS3-203ENST00000439936 VPS33BQ9H267 617 aa9.34□□□□□ -0.91
COPS3-203ENST00000439936 PODXL2Q9NZ53 605 aa9.34□□□□□ -0.91
COPS3-203ENST00000439936 RFX5P48382 616 aaPredicted RBP9.33□□□□□ -0.92
COPS3-203ENST00000439936 PDE3AQ14432 1141 aa9.33□□□□□ -0.92
COPS3-203ENST00000439936 TAF7LQ5H9L4 462 aa9.33□□□□□ -0.92
COPS3-203ENST00000439936 HELBQ8NG08 1087 aaPredicted RBP9.33□□□□□ -0.92
COPS3-203ENST00000439936 KLHDC4Q8TBB5 520 aa9.33□□□□□ -0.92
COPS3-203ENST00000439936 TBC1D16Q8TBP0 767 aa9.33□□□□□ -0.92
COPS3-203ENST00000439936 ANKIB1Q9P2G1 1089 aa9.33□□□□□ -0.92
COPS3-203ENST00000439936 COG6Q9Y2V7 657 aa9.33□□□□□ -0.92
COPS3-203ENST00000439936 RIPOR2Q9Y4F9 1068 aa9.33□□□□□ -0.92
COPS3-203ENST00000439936 GNAI2P04899 355 aa9.32□□□□□ -0.92
COPS3-203ENST00000439936 SLC10A3P09131 477 aa9.32□□□□□ -0.92
COPS3-203ENST00000439936 ATP2B4P23634 1241 aa9.32□□□□□ -0.92
COPS3-203ENST00000439936 PTPN12Q05209 780 aaKnown RBP9.32□□□□□ -0.92
COPS3-203ENST00000439936 CHRNDQ07001 517 aa9.32□□□□□ -0.92
COPS3-203ENST00000439936 AOC3Q16853 763 aa9.32□□□□□ -0.92
COPS3-203ENST00000439936 WASHC4Q2M389 1173 aa9.32□□□□□ -0.92
COPS3-203ENST00000439936 LARGE2Q8N3Y3 721 aa9.32□□□□□ -0.92
COPS3-203ENST00000439936 NLRP7Q8WX94 980 aa9.32□□□□□ -0.92
COPS3-203ENST00000439936 REPIN1Q9BWE0 567 aaKnown RBP9.32□□□□□ -0.92
COPS3-203ENST00000439936 GGA1Q9UJY5 639 aa9.32□□□□□ -0.92
COPS3-203ENST00000439936 XDHP47989 1333 aa9.32□□□□□ -0.92
COPS3-203ENST00000439936 LRRC37AA6NMS7 1700 aa9.31□□□□□ -0.92
COPS3-203ENST00000439936 SNAP23O00161 211 aa9.31□□□□□ -0.92
COPS3-203ENST00000439936 PPIP5K2O43314 1243 aa9.31□□□□□ -0.92
COPS3-203ENST00000439936 TAF5LO75529 589 aa9.31□□□□□ -0.92
COPS3-203ENST00000439936 ATP8B2P98198 1209 aa9.31□□□□□ -0.92
COPS3-203ENST00000439936 KIAA2012Q0VF49 1180 aa9.31□□□□□ -0.92
COPS3-203ENST00000439936 MVPQ14764 893 aaKnown RBP9.31□□□□□ -0.92
COPS3-203ENST00000439936 LRRC24Q50LG9 513 aa9.31□□□□□ -0.92
COPS3-203ENST00000439936 ZNF784Q8NCA9 323 aaPredicted RBP9.31□□□□□ -0.92
COPS3-203ENST00000439936 JDP2Q8WYK2 163 aa9.31□□□□□ -0.92
COPS3-203ENST00000439936 GPR101Q96P66 508 aaPredicted RBP9.31□□□□□ -0.92
COPS3-203ENST00000439936 ZC3H12CQ9C0D7 883 aaKnown RBP9.31□□□□□ -0.92
COPS3-203ENST00000439936 ANKRD2Q9GZV1 360 aa9.31□□□□□ -0.92
COPS3-203ENST00000439936 CNNM1Q9NRU3 951 aa9.31□□□□□ -0.92
COPS3-203ENST00000439936 LEMD3Q9Y2U8 911 aa9.31□□□□□ -0.92
COPS3-203ENST00000439936 PNMA6EA0A0J9YXQ4 647 aa9.3□□□□□ -0.92
COPS3-203ENST00000439936 GLTPD2A6NH11 291 aa9.3□□□□□ -0.92
COPS3-203ENST00000439936 FZD9O00144 591 aa9.3□□□□□ -0.92
COPS3-203ENST00000439936 EIF5BO60841 1220 aaKnown RBP9.3□□□□□ -0.92
COPS3-203ENST00000439936 UFL1O94874 794 aa9.3□□□□□ -0.92
COPS3-203ENST00000439936 MTX1Q13505 466 aa9.3□□□□□ -0.92
COPS3-203ENST00000439936 TXNRD3Q86VQ6 643 aa9.3□□□□□ -0.92
COPS3-203ENST00000439936 PARP9Q8IXQ6 854 aa9.3□□□□□ -0.92
COPS3-203ENST00000439936 ZNF526Q8TF50 670 aaPredicted RBP9.3□□□□□ -0.92
COPS3-203ENST00000439936 EYA3Q99504 573 aa9.3□□□□□ -0.92
COPS3-203ENST00000439936 C1orf115Q9H7X2 142 aa9.3□□□□□ -0.92
COPS3-203ENST00000439936 GPBP1L1Q9HC44 474 aaPredicted RBP9.3□□□□□ -0.92
COPS3-203ENST00000439936 ZBTB40Q9NUA8 1239 aa9.3□□□□□ -0.92
COPS3-203ENST00000439936 DDX19BQ9UMR2 479 aa9.3□□□□□ -0.92
COPS3-203ENST00000439936 PA2G4Q9UQ80 394 aaKnown RBP9.3□□□□□ -0.92
COPS3-203ENST00000439936 EYA2O00167 538 aa9.29□□□□□ -0.92
COPS3-203ENST00000439936 SRGAP3O43295 1099 aa9.29□□□□□ -0.92
COPS3-203ENST00000439936 DDNO94850 711 aaPredicted RBP9.29□□□□□ -0.92
COPS3-203ENST00000439936 RRP1P56182 461 aaKnown RBP9.29□□□□□ -0.92
COPS3-203ENST00000439936 BLOC1S3Q6QNY0 202 aa9.29□□□□□ -0.92
COPS3-203ENST00000439936 ATG9AQ7Z3C6 839 aa9.29□□□□□ -0.92
COPS3-203ENST00000439936 NIM1KQ8IY84 436 aa9.29□□□□□ -0.92
COPS3-203ENST00000439936 ZNF775Q96BV0 537 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms