RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 OGFOD1Q8N543 542 aa17.57■□□□□ 0.4
CSTF3-202ENST00000431742 MTMR14Q8NCE2 650 aa17.57■□□□□ 0.4
CSTF3-202ENST00000431742 ZBED3Q96IU2 234 aaPredicted RBP17.57■□□□□ 0.4
CSTF3-202ENST00000431742 MYOZ2Q9NPC6 264 aa17.57■□□□□ 0.4
CSTF3-202ENST00000431742 ZBTB47Q9UFB7 747 aaPredicted RBP17.57■□□□□ 0.4
CSTF3-202ENST00000431742 TTF2Q9UNY4 1162 aaKnown RBP17.57■□□□□ 0.4
CSTF3-202ENST00000431742 MAST3O60307 1309 aa17.56■□□□□ 0.4
CSTF3-202ENST00000431742 F8W031 263 aaPredicted RBP17.56■□□□□ 0.4
CSTF3-202ENST00000431742 MX1P20591 662 aa17.56■□□□□ 0.4
CSTF3-202ENST00000431742 HDLBPQ00341 1268 aaKnown RBP17.56■□□□□ 0.4
CSTF3-202ENST00000431742 KIF4BQ2VIQ3 1234 aa17.56■□□□□ 0.4
CSTF3-202ENST00000431742 TBC1D10BQ4KMP7 808 aaPredicted RBP17.56■□□□□ 0.4
CSTF3-202ENST00000431742 GPATCH3Q96I76 525 aa17.56■□□□□ 0.4
CSTF3-202ENST00000431742 STAP2Q9UGK3 403 aa17.56■□□□□ 0.4
CSTF3-202ENST00000431742 SERPINA10Q9UK55 444 aa17.56■□□□□ 0.4
CSTF3-202ENST00000431742 HDAC9Q9UKV0 1011 aa17.56■□□□□ 0.4
CSTF3-202ENST00000431742 NDUFB9Q9Y6M9 179 aa17.56■□□□□ 0.4
CSTF3-202ENST00000431742 FOCADQ5VW36 1801 aa17.56■□□□□ 0.4
CSTF3-202ENST00000431742 LDHBP07195 334 aaKnown RBP17.55■□□□□ 0.4
CSTF3-202ENST00000431742 POTEIP0CG38 1075 aa17.55■□□□□ 0.4
CSTF3-202ENST00000431742 POTEJP0CG39 1038 aa17.55■□□□□ 0.4
CSTF3-202ENST00000431742 SPTY2D1Q68D10 685 aaPredicted RBP17.55■□□□□ 0.4
CSTF3-202ENST00000431742 TBC1D9Q6ZT07 1266 aa17.55■□□□□ 0.4
CSTF3-202ENST00000431742 CENPQQ7L2Z9 268 aaPredicted RBP17.55■□□□□ 0.4
CSTF3-202ENST00000431742 PI4K2BQ8TCG2 481 aa17.55■□□□□ 0.4
CSTF3-202ENST00000431742 HAUS7Q99871 368 aa17.55■□□□□ 0.4
CSTF3-202ENST00000431742 MRIQ9BWK5 157 aa17.55■□□□□ 0.4
CSTF3-202ENST00000431742 PIH1D3Q9NQM4 214 aaKnown RBP17.55■□□□□ 0.4
CSTF3-202ENST00000431742 ABCF2Q9UG63 623 aa17.55■□□□□ 0.4
CSTF3-202ENST00000431742 TRPM7Q96QT4 1865 aa17.54■□□□□ 0.4
CSTF3-202ENST00000431742 IGSF3O75054 1194 aa17.54■□□□□ 0.4
CSTF3-202ENST00000431742 TSHZ3Q63HK5 1081 aa17.54■□□□□ 0.4
CSTF3-202ENST00000431742 LDHDQ86WU2 507 aa17.54■□□□□ 0.4
CSTF3-202ENST00000431742 ZNF384Q8TF68 577 aa17.54■□□□□ 0.4
CSTF3-202ENST00000431742 AOX1Q06278 1338 aa17.53■□□□□ 0.4
CSTF3-202ENST00000431742 WNT10BO00744 389 aa17.53■□□□□ 0.4
CSTF3-202ENST00000431742 CRKP46108 304 aa17.53■□□□□ 0.4
CSTF3-202ENST00000431742 PDE1AP54750 535 aa17.53■□□□□ 0.4
CSTF3-202ENST00000431742 CFAP100Q494V2 611 aa17.53■□□□□ 0.4
CSTF3-202ENST00000431742 EAPPQ56P03 285 aaPredicted RBP17.53■□□□□ 0.4
CSTF3-202ENST00000431742 HHIPL2Q6UWX4 724 aa17.53■□□□□ 0.4
CSTF3-202ENST00000431742 ERICH6Q7L0X2 663 aa17.53■□□□□ 0.4
CSTF3-202ENST00000431742 ZC3H15Q8WU90 426 aaKnown RBP17.53■□□□□ 0.4
CSTF3-202ENST00000431742 CCDC136Q96JN2 1154 aa17.53■□□□□ 0.4
CSTF3-202ENST00000431742 BOLA2Q9H3K6 86 aa17.53■□□□□ 0.4
CSTF3-202ENST00000431742 ANTXR1Q9H6X2 564 aa17.53■□□□□ 0.4
CSTF3-202ENST00000431742 PGAP2Q9UHJ9 254 aa17.53■□□□□ 0.4
CSTF3-202ENST00000431742 PCDHAC2Q9Y5I4 1007 aa17.53■□□□□ 0.4
CSTF3-202ENST00000431742 GAKO14976 1311 aa17.52■□□□□ 0.4
CSTF3-202ENST00000431742 SPDYE2BA6NHP3 402 aa17.52■□□□□ 0.4
CSTF3-202ENST00000431742 GLRX3O76003 335 aaKnown RBP17.52■□□□□ 0.4
CSTF3-202ENST00000431742 TOMM70O94826 608 aa17.52■□□□□ 0.4
CSTF3-202ENST00000431742 SPDYE6P0CI01 402 aa17.52■□□□□ 0.4
CSTF3-202ENST00000431742 PDE4AP27815 886 aa17.52■□□□□ 0.4
CSTF3-202ENST00000431742 MECOMQ03112 1051 aa17.52■□□□□ 0.4
CSTF3-202ENST00000431742 DIXDC1Q155Q3 683 aa17.52■□□□□ 0.4
CSTF3-202ENST00000431742 NBPF9Q3BBW0 867 aa17.52■□□□□ 0.4
CSTF3-202ENST00000431742 RBM26Q5T8P6 1007 aaKnown RBP17.52■□□□□ 0.4
CSTF3-202ENST00000431742 PLEKHM2Q8IWE5 1019 aa17.52■□□□□ 0.4
CSTF3-202ENST00000431742 RBM46Q8TBY0 533 aaKnown RBP17.52■□□□□ 0.4
CSTF3-202ENST00000431742 TEKT1Q969V4 418 aa17.52■□□□□ 0.4
CSTF3-202ENST00000431742 NSUN4Q96CB9 384 aaKnown RBP17.52■□□□□ 0.4
CSTF3-202ENST00000431742 ZDHHC15Q96MV8 337 aa17.52■□□□□ 0.4
CSTF3-202ENST00000431742 DNAJC2Q99543 621 aaKnown RBP17.52■□□□□ 0.4
CSTF3-202ENST00000431742 PAG1Q9NWQ8 432 aa17.52■□□□□ 0.4
CSTF3-202ENST00000431742 PPP4R2Q9NY27 417 aa17.52■□□□□ 0.4
CSTF3-202ENST00000431742 ASTN2O75129 1339 aaPredicted RBP17.51■□□□□ 0.39
CSTF3-202ENST00000431742 GOLIM4O00461 696 aa17.51■□□□□ 0.39
CSTF3-202ENST00000431742 ERC2O15083 957 aa17.51■□□□□ 0.39
CSTF3-202ENST00000431742 TTF1Q15361 905 aaPredicted RBP17.51■□□□□ 0.39
CSTF3-202ENST00000431742 DLGAP5Q15398 846 aa17.51■□□□□ 0.39
CSTF3-202ENST00000431742 DZIP1Q86YF9 867 aaKnown RBP17.51■□□□□ 0.39
CSTF3-202ENST00000431742 EDC3Q96F86 508 aaKnown RBP17.51■□□□□ 0.39
CSTF3-202ENST00000431742 OSBPL3Q9H4L5 887 aa17.51■□□□□ 0.39
CSTF3-202ENST00000431742 LRP2BPQ9P2M1 347 aa17.51■□□□□ 0.39
CSTF3-202ENST00000431742 DAGLAQ9Y4D2 1042 aa17.51■□□□□ 0.39
CSTF3-202ENST00000431742 KCNA4P22459 653 aa17.5■□□□□ 0.39
CSTF3-202ENST00000431742 CHADLQ6NUI6 762 aa17.5■□□□□ 0.39
CSTF3-202ENST00000431742 FAM163AQ96GL9 167 aaPredicted RBP17.5■□□□□ 0.39
CSTF3-202ENST00000431742 PRMT6Q96LA8 375 aaPredicted RBP17.5■□□□□ 0.39
CSTF3-202ENST00000431742 RAI14Q9P0K7 980 aa17.5■□□□□ 0.39
CSTF3-202ENST00000431742 MROH7-TTC4A0A0A0MT08 1334 aa17.49■□□□□ 0.39
CSTF3-202ENST00000431742 PITPNM2Q9BZ72 1349 aa17.49■□□□□ 0.39
CSTF3-202ENST00000431742 APOBEC3HQ6NTF7 200 aaKnown RBP17.49■□□□□ 0.39
CSTF3-202ENST00000431742 TMED8Q6PL24 325 aaPredicted RBP17.49■□□□□ 0.39
CSTF3-202ENST00000431742 GGA3Q9NZ52 723 aa17.49■□□□□ 0.39
CSTF3-202ENST00000431742 IDH1O75874 414 aaKnown RBP17.48■□□□□ 0.39
CSTF3-202ENST00000431742 RBM5P52756 815 aaKnown RBP eCLIP17.48■□□□□ 0.39
CSTF3-202ENST00000431742 GSTO1P78417 241 aa17.48■□□□□ 0.39
CSTF3-202ENST00000431742 ANGEL2Q5VTE6 544 aaKnown RBP17.48■□□□□ 0.39
CSTF3-202ENST00000431742 SLF2Q8IX21 1173 aa17.48■□□□□ 0.39
CSTF3-202ENST00000431742 SMC1BQ8NDV3 1235 aa17.48■□□□□ 0.39
CSTF3-202ENST00000431742 CLEC11AQ9Y240 323 aa17.48■□□□□ 0.39
CSTF3-202ENST00000431742 RFX7Q2KHR2 1363 aa17.48■□□□□ 0.39
CSTF3-202ENST00000431742 MAP3K12Q12852 859 aa17.47■□□□□ 0.39
CSTF3-202ENST00000431742 SPDYE2Q495Y8 402 aa17.47■□□□□ 0.39
CSTF3-202ENST00000431742 NAA16Q6N069 864 aaPredicted RBP17.47■□□□□ 0.39
CSTF3-202ENST00000431742 DDX60LQ5H9U9 1706 aaKnown RBP17.47■□□□□ 0.39
CSTF3-202ENST00000431742 GPR75-ASB3A0A0A6YYF3 556 aa17.46■□□□□ 0.39
CSTF3-202ENST00000431742 LDHCP07864 332 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms