RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 CDAN1Q8IWY9 1227 aa12.92□□□□□ -0.34
ATG4B-211ENST00000429899 CERS5Q8N5B7 392 aa12.92□□□□□ -0.34
ATG4B-211ENST00000429899 ZBTB38Q8NAP3 1195 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-211ENST00000429899 PAWRQ96IZ0 340 aaKnown RBP12.92□□□□□ -0.34
ATG4B-211ENST00000429899 PRMT6Q96LA8 375 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-211ENST00000429899 UBE2OQ9C0C9 1292 aaKnown RBP12.92□□□□□ -0.34
ATG4B-211ENST00000429899 COA1Q9GZY4 146 aa12.92□□□□□ -0.34
ATG4B-211ENST00000429899 VEZTQ9HBM0 779 aa12.92□□□□□ -0.34
ATG4B-211ENST00000429899 MINPP1Q9UNW1 487 aa12.92□□□□□ -0.34
ATG4B-211ENST00000429899 CCT4P50991 539 aaKnown RBP12.91□□□□□ -0.34
ATG4B-211ENST00000429899 RASA3Q14644 834 aa12.91□□□□□ -0.34
ATG4B-211ENST00000429899 MTMR14Q8NCE2 650 aa12.91□□□□□ -0.34
ATG4B-211ENST00000429899 AK9Q5TCS8 1911 aa12.91□□□□□ -0.34
ATG4B-211ENST00000429899 HOXD10P28358 340 aa12.9□□□□□ -0.34
ATG4B-211ENST00000429899 VGLL4Q14135 290 aa12.9□□□□□ -0.34
ATG4B-211ENST00000429899 WWC1Q8IX03 1113 aa12.9□□□□□ -0.34
ATG4B-211ENST00000429899 SYMPKQ92797 1274 aaKnown RBP12.9□□□□□ -0.34
ATG4B-211ENST00000429899 CPA4Q9UI42 421 aa12.9□□□□□ -0.34
ATG4B-211ENST00000429899 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
ATG4B-211ENST00000429899 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
ATG4B-211ENST00000429899 TMEM265A0A087WTH1 108 aa12.89□□□□□ -0.35
ATG4B-211ENST00000429899 SPDYE2BA6NHP3 402 aa12.89□□□□□ -0.35
ATG4B-211ENST00000429899 BTBD19C9JJ37 291 aa12.89□□□□□ -0.35
ATG4B-211ENST00000429899 F8W031 263 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-211ENST00000429899 PDE8AO60658 829 aa12.89□□□□□ -0.35
ATG4B-211ENST00000429899 SPDYE6P0CI01 402 aa12.89□□□□□ -0.35
ATG4B-211ENST00000429899 CFAP100Q494V2 611 aa12.89□□□□□ -0.35
ATG4B-211ENST00000429899 C17orf99Q6UX52 265 aa12.89□□□□□ -0.35
ATG4B-211ENST00000429899 MAFAQ8NHW3 353 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-211ENST00000429899 DIS3LQ8TF46 1054 aaKnown RBP12.89□□□□□ -0.35
ATG4B-211ENST00000429899 DEFB118Q96PH6 123 aa12.89□□□□□ -0.35
ATG4B-211ENST00000429899 POTEB2H3BUK9 544 aa12.88□□□□□ -0.35
ATG4B-211ENST00000429899 HOXD11P31277 338 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-211ENST00000429899 PRKCZQ05513 592 aa12.88□□□□□ -0.35
ATG4B-211ENST00000429899 NECAB2Q7Z6G3 386 aa12.88□□□□□ -0.35
ATG4B-211ENST00000429899 TEPSINQ96N21 525 aa12.88□□□□□ -0.35
ATG4B-211ENST00000429899 DNAH12Q6ZR08 3092 aa12.88□□□□□ -0.35
ATG4B-211ENST00000429899 PTPRFP10586 1907 aa12.88□□□□□ -0.35
ATG4B-211ENST00000429899 TNFRSF10AO00220 468 aa12.87□□□□□ -0.35
ATG4B-211ENST00000429899 MYO1BO43795 1136 aa12.87□□□□□ -0.35
ATG4B-211ENST00000429899 NEFMP07197 916 aa12.87□□□□□ -0.35
ATG4B-211ENST00000429899 SLAIN1Q8ND83 568 aa12.87□□□□□ -0.35
ATG4B-211ENST00000429899 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.87□□□□□ -0.35
ATG4B-211ENST00000429899 BSDC1Q9NW68 430 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-211ENST00000429899 PCCAP05165 728 aaPredicted RBP12.86□□□□□ -0.35
ATG4B-211ENST00000429899 CETPP11597 493 aa12.86□□□□□ -0.35
ATG4B-211ENST00000429899 RIPK4P57078 832 aa12.86□□□□□ -0.35
ATG4B-211ENST00000429899 NEUROD2Q15784 382 aa12.86□□□□□ -0.35
ATG4B-211ENST00000429899 FAM109BQ6ICB4 259 aaPredicted RBP12.86□□□□□ -0.35
ATG4B-211ENST00000429899 TRMT2AQ8IZ69 625 aaKnown RBP12.86□□□□□ -0.35
ATG4B-211ENST00000429899 HELBQ8NG08 1087 aaPredicted RBP12.86□□□□□ -0.35
ATG4B-211ENST00000429899 CDCA7LQ96GN5 454 aa12.86□□□□□ -0.35
ATG4B-211ENST00000429899 CDX2Q99626 313 aaPredicted RBP12.86□□□□□ -0.35
ATG4B-211ENST00000429899 GABRQQ9UN88 632 aa12.86□□□□□ -0.35
ATG4B-211ENST00000429899 CSADQ9Y600 493 aa12.86□□□□□ -0.35
ATG4B-211ENST00000429899 ADGRA2Q96PE1 1338 aa12.86□□□□□ -0.35
ATG4B-211ENST00000429899 INHAP05111 366 aa12.85□□□□□ -0.35
ATG4B-211ENST00000429899 ELNP15502 786 aa12.85□□□□□ -0.35
ATG4B-211ENST00000429899 MAP3K9P80192 1104 aa12.85□□□□□ -0.35
ATG4B-211ENST00000429899 GOLGA2Q08379 1002 aa12.85□□□□□ -0.35
ATG4B-211ENST00000429899 SLFN5Q08AF3 891 aa12.85□□□□□ -0.35
ATG4B-211ENST00000429899 LMOD3Q0VAK6 560 aa12.85□□□□□ -0.35
ATG4B-211ENST00000429899 ZNF697Q5TEC3 545 aa12.85□□□□□ -0.35
ATG4B-211ENST00000429899 HDGFL1Q5TGJ6 251 aa12.85□□□□□ -0.35
ATG4B-211ENST00000429899 WDR63Q8IWG1 891 aa12.85□□□□□ -0.35
ATG4B-211ENST00000429899 CDC5LQ99459 802 aaKnown RBP12.85□□□□□ -0.35
ATG4B-211ENST00000429899 MYD88Q99836 296 aa12.85□□□□□ -0.35
ATG4B-211ENST00000429899 GREM2Q9H772 168 aa12.85□□□□□ -0.35
ATG4B-211ENST00000429899 CD209Q9NNX6 404 aa12.85□□□□□ -0.35
ATG4B-211ENST00000429899 ZCCHC17Q9NP64 241 aaKnown RBP12.85□□□□□ -0.35
ATG4B-211ENST00000429899 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-211ENST00000429899 BABAM1Q9NWV8 329 aa12.85□□□□□ -0.35
ATG4B-211ENST00000429899 DBF4Q9UBU7 674 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-211ENST00000429899 IL16Q14005 1332 aa12.85□□□□□ -0.35
ATG4B-211ENST00000429899 SPDYE5A6NIY4 337 aa12.84□□□□□ -0.35
ATG4B-211ENST00000429899 IRF6O14896 467 aa12.84□□□□□ -0.35
ATG4B-211ENST00000429899 ADCY3O60266 1144 aa12.84□□□□□ -0.35
ATG4B-211ENST00000429899 HSP90B1P14625 803 aaKnown RBP12.84□□□□□ -0.35
ATG4B-211ENST00000429899 DUSP27Q5VZP5 1158 aa12.84□□□□□ -0.35
ATG4B-211ENST00000429899 RIC3Q7Z5B4 369 aa12.84□□□□□ -0.35
ATG4B-211ENST00000429899 TTLL11Q8NHH1 800 aa12.84□□□□□ -0.35
ATG4B-211ENST00000429899 TMEM39BQ9GZU3 492 aa12.84□□□□□ -0.35
ATG4B-211ENST00000429899 LEMD3Q9Y2U8 911 aa12.84□□□□□ -0.35
ATG4B-211ENST00000429899 SNCAIPQ9Y6H5 919 aa12.84□□□□□ -0.35
ATG4B-211ENST00000429899 E9PSI1 815 aa12.83□□□□□ -0.36
ATG4B-211ENST00000429899 SNAP23O00161 211 aa12.83□□□□□ -0.36
ATG4B-211ENST00000429899 RBM5P52756 815 aaKnown RBP eCLIP12.83□□□□□ -0.36
ATG4B-211ENST00000429899 CTSWP56202 376 aa12.83□□□□□ -0.36
ATG4B-211ENST00000429899 CCDC191Q8NCU4 936 aa12.83□□□□□ -0.36
ATG4B-211ENST00000429899 PHAXQ9H814 394 aaKnown RBP12.83□□□□□ -0.36
ATG4B-211ENST00000429899 ZNF70Q9UC06 446 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-211ENST00000429899 JAG2Q9Y219 1238 aa12.83□□□□□ -0.36
ATG4B-211ENST00000429899 COL2A1P02458 1487 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-211ENST00000429899 FCGRTP55899 365 aa12.82□□□□□ -0.36
ATG4B-211ENST00000429899 MDM2Q00987 491 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-211ENST00000429899 MAP3K12Q12852 859 aa12.82□□□□□ -0.36
ATG4B-211ENST00000429899 SNAPC2Q13487 334 aa12.82□□□□□ -0.36
ATG4B-211ENST00000429899 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
ATG4B-211ENST00000429899 ERO1BQ86YB8 467 aa12.82□□□□□ -0.36
ATG4B-211ENST00000429899 MYLIPQ8WY64 445 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms