RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 U2AF1L4Q8WU68 220 aaKnown RBP13.56□□□□□ -0.24
RAPGEF1-205ENST00000419442 GDF15Q99988 308 aa13.56□□□□□ -0.24
RAPGEF1-205ENST00000419442 RNF208Q9H0X6 261 aa13.56□□□□□ -0.24
RAPGEF1-205ENST00000419442 ZNF70Q9UC06 446 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF1-205ENST00000419442 LAS1LQ9Y4W2 734 aaKnown RBP13.56□□□□□ -0.24
RAPGEF1-205ENST00000419442 CSADQ9Y600 493 aa13.56□□□□□ -0.24
RAPGEF1-205ENST00000419442 SNCAIPQ9Y6H5 919 aa13.56□□□□□ -0.24
RAPGEF1-205ENST00000419442 F8W031 263 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF1-205ENST00000419442 EVI5O60447 810 aa13.55□□□□□ -0.24
RAPGEF1-205ENST00000419442 SGPL1O95470 568 aa13.55□□□□□ -0.24
RAPGEF1-205ENST00000419442 UBXN2AP68543 259 aa13.55□□□□□ -0.24
RAPGEF1-205ENST00000419442 ERO1BQ86YB8 467 aa13.55□□□□□ -0.24
RAPGEF1-205ENST00000419442 DEFB123Q8N688 67 aa13.55□□□□□ -0.24
RAPGEF1-205ENST00000419442 RAET1EQ8TD07 263 aa13.55□□□□□ -0.24
RAPGEF1-205ENST00000419442 MTMR10Q9NXD2 777 aa13.55□□□□□ -0.24
RAPGEF1-205ENST00000419442 LAMA3Q16787 3333 aa13.55□□□□□ -0.24
RAPGEF1-205ENST00000419442 CHRNDQ07001 517 aa13.54□□□□□ -0.24
RAPGEF1-205ENST00000419442 LRIT3Q3SXY7 679 aa13.54□□□□□ -0.24
RAPGEF1-205ENST00000419442 PLA2G12BQ9BX93 195 aa13.54□□□□□ -0.24
RAPGEF1-205ENST00000419442 MYPNQ86TC9 1320 aa13.54□□□□□ -0.24
RAPGEF1-205ENST00000419442 H7C1W4 665 aa13.53□□□□□ -0.24
RAPGEF1-205ENST00000419442 DDX58O95786 925 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-205ENST00000419442 ITGA6P23229 1130 aa13.53□□□□□ -0.24
RAPGEF1-205ENST00000419442 KCNJ4P48050 445 aa13.53□□□□□ -0.24
RAPGEF1-205ENST00000419442 PPIL2Q13356 520 aa13.53□□□□□ -0.24
RAPGEF1-205ENST00000419442 SNAPC2Q13487 334 aa13.53□□□□□ -0.24
RAPGEF1-205ENST00000419442 UNC93B1Q9H1C4 597 aa13.53□□□□□ -0.24
RAPGEF1-205ENST00000419442 TDRD3Q9H7E2 651 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-205ENST00000419442 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
RAPGEF1-205ENST00000419442 SERPINA10Q9UK55 444 aa13.53□□□□□ -0.24
RAPGEF1-205ENST00000419442 FAM205AQ6ZU69 1335 aa13.53□□□□□ -0.24
RAPGEF1-205ENST00000419442 SNAP23O00161 211 aa13.52□□□□□ -0.25
RAPGEF1-205ENST00000419442 IRF6O14896 467 aa13.52□□□□□ -0.25
RAPGEF1-205ENST00000419442 CSF1RP07333 972 aa13.52□□□□□ -0.25
RAPGEF1-205ENST00000419442 ZNF853P0CG23 659 aa13.52□□□□□ -0.25
RAPGEF1-205ENST00000419442 Q7L0L9 218 aa13.52□□□□□ -0.25
RAPGEF1-205ENST00000419442 ANKRD23Q86SG2 305 aa13.52□□□□□ -0.25
RAPGEF1-205ENST00000419442 SLAIN1Q8ND83 568 aa13.52□□□□□ -0.25
RAPGEF1-205ENST00000419442 MPHOSPH8Q99549 860 aa13.52□□□□□ -0.25
RAPGEF1-205ENST00000419442 TMEM39BQ9GZU3 492 aa13.52□□□□□ -0.25
RAPGEF1-205ENST00000419442 CPA4Q9UI42 421 aa13.52□□□□□ -0.25
RAPGEF1-205ENST00000419442 MAP3K2Q9Y2U5 619 aa13.52□□□□□ -0.25
RAPGEF1-205ENST00000419442 FMNL1O95466 1100 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-205ENST00000419442 TNNI2P48788 182 aa13.51□□□□□ -0.25
RAPGEF1-205ENST00000419442 RBM5P52756 815 aaKnown RBP eCLIP13.51□□□□□ -0.25
RAPGEF1-205ENST00000419442 PRKCZQ05513 592 aa13.51□□□□□ -0.25
RAPGEF1-205ENST00000419442 NEUROD2Q15784 382 aa13.51□□□□□ -0.25
RAPGEF1-205ENST00000419442 KSR2Q6VAB6 950 aa13.51□□□□□ -0.25
RAPGEF1-205ENST00000419442 ZNF804AQ7Z570 1209 aa13.51□□□□□ -0.25
RAPGEF1-205ENST00000419442 CCER1Q8TC90 406 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-205ENST00000419442 CRISPLD2Q9H0B8 497 aa13.51□□□□□ -0.25
RAPGEF1-205ENST00000419442 NEURL1BA8MQ27 555 aa13.5□□□□□ -0.25
RAPGEF1-205ENST00000419442 CASP7P55210 303 aa13.5□□□□□ -0.25
RAPGEF1-205ENST00000419442 MAPK8IP2Q13387 824 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF1-205ENST00000419442 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.5□□□□□ -0.25
RAPGEF1-205ENST00000419442 DZIP1LQ8IYY4 767 aaKnown RBP13.5□□□□□ -0.25
RAPGEF1-205ENST00000419442 TCP10L2B9ZVM9 353 aa13.49□□□□□ -0.25
RAPGEF1-205ENST00000419442 ECM2O94769 699 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF1-205ENST00000419442 BCRP11274 1271 aa13.49□□□□□ -0.25
RAPGEF1-205ENST00000419442 PPATQ06203 517 aa13.49□□□□□ -0.25
RAPGEF1-205ENST00000419442 CWF19L2Q2TBE0 894 aaKnown RBP13.49□□□□□ -0.25
RAPGEF1-205ENST00000419442 UBE3BQ7Z3V4 1068 aa13.49□□□□□ -0.25
RAPGEF1-205ENST00000419442 PAK6Q9NQU5 681 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF1-205ENST00000419442 BIN2Q9UBW5 565 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF1-205ENST00000419442 TTF2Q9UNY4 1162 aaKnown RBP13.49□□□□□ -0.25
RAPGEF1-205ENST00000419442 KCNH4Q9UQ05 1017 aa13.49□□□□□ -0.25
RAPGEF1-205ENST00000419442 JAG2Q9Y219 1238 aa13.49□□□□□ -0.25
RAPGEF1-205ENST00000419442 DOCK3Q8IZD9 2030 aa13.48□□□□□ -0.25
RAPGEF1-205ENST00000419442 PI4KAP2A4QPH2 592 aa13.48□□□□□ -0.25
RAPGEF1-205ENST00000419442 PDHXO00330 501 aa13.48□□□□□ -0.25
RAPGEF1-205ENST00000419442 TAF5LO75529 589 aa13.48□□□□□ -0.25
RAPGEF1-205ENST00000419442 BCAMP50895 628 aa13.48□□□□□ -0.25
RAPGEF1-205ENST00000419442 FCGRTP55899 365 aa13.48□□□□□ -0.25
RAPGEF1-205ENST00000419442 NEXNQ0ZGT2 675 aa13.48□□□□□ -0.25
RAPGEF1-205ENST00000419442 MOGSQ13724 837 aa13.48□□□□□ -0.25
RAPGEF1-205ENST00000419442 CCDC146Q8IYE0 955 aa13.48□□□□□ -0.25
RAPGEF1-205ENST00000419442 PI4KAP1Q8N8J0 262 aa13.48□□□□□ -0.25
RAPGEF1-205ENST00000419442 PXYLP1Q8TE99 480 aa13.48□□□□□ -0.25
RAPGEF1-205ENST00000419442 ZKSCAN4Q969J2 545 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF1-205ENST00000419442 WRNIP1Q96S55 665 aa13.48□□□□□ -0.25
RAPGEF1-205ENST00000419442 GABRQQ9UN88 632 aa13.48□□□□□ -0.25
RAPGEF1-205ENST00000419442 RPAP1Q9BWH6 1393 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-205ENST00000419442 ADCY3O60266 1144 aa13.47□□□□□ -0.25
RAPGEF1-205ENST00000419442 CRKP46108 304 aa13.47□□□□□ -0.25
RAPGEF1-205ENST00000419442 IRF5Q13568 498 aa13.47□□□□□ -0.25
RAPGEF1-205ENST00000419442 MFSD14BQ5SR56 506 aa13.47□□□□□ -0.25
RAPGEF1-205ENST00000419442 TDHQ8IZJ6 230 aa13.47□□□□□ -0.25
RAPGEF1-205ENST00000419442 TDRD7Q8NHU6 1098 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-205ENST00000419442 RUNDC1Q96C34 613 aa13.47□□□□□ -0.25
RAPGEF1-205ENST00000419442 PAWRQ96IZ0 340 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-205ENST00000419442 DEFB118Q96PH6 123 aa13.47□□□□□ -0.25
RAPGEF1-205ENST00000419442 RNF216Q9NWF9 866 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-205ENST00000419442 UNC80Q8N2C7 3258 aa13.46□□□□□ -0.25
RAPGEF1-205ENST00000419442 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF1-205ENST00000419442 TFRCP02786 760 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-205ENST00000419442 INHAP05111 366 aa13.46□□□□□ -0.25
RAPGEF1-205ENST00000419442 HDLBPQ00341 1268 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-205ENST00000419442 FKBP1CQ5VVH2 108 aa13.46□□□□□ -0.25
RAPGEF1-205ENST00000419442 CCDC30Q5VVM6 783 aa13.46□□□□□ -0.25
RAPGEF1-205ENST00000419442 NECAB2Q7Z6G3 386 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms