RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 UBE2Q2LH0YL09 131 aa12.04□□□□□ -0.48
NIF3L1-202ENST00000409020 EYA2O00167 538 aa12.04□□□□□ -0.48
NIF3L1-202ENST00000409020 SPDYE6P0CI01 402 aa12.04□□□□□ -0.48
NIF3L1-202ENST00000409020 CHAF1AQ13111 956 aaPredicted RBP12.04□□□□□ -0.48
NIF3L1-202ENST00000409020 PRKG1Q13976 671 aa12.04□□□□□ -0.48
NIF3L1-202ENST00000409020 DLGAP5Q15398 846 aa12.04□□□□□ -0.48
NIF3L1-202ENST00000409020 FRAT1Q92837 279 aaPredicted RBP12.04□□□□□ -0.48
NIF3L1-202ENST00000409020 CLUAP1Q96AJ1 413 aa12.04□□□□□ -0.48
NIF3L1-202ENST00000409020 SSC5DA1L4H1 1573 aa12.04□□□□□ -0.48
NIF3L1-202ENST00000409020 COL1A1P02452 1464 aaPredicted RBP12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 SLC10A3P09131 477 aa12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 KIF23Q02241 960 aaPredicted RBP12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 NOGQ13253 232 aa12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 INTS3Q68E01 1043 aaKnown RBP12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 RASAL3Q86YV0 1011 aa12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 MTMR14Q8NCE2 650 aa12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 KIF16BQ96L93 1317 aa12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 PAPPA2Q9BXP8 1791 aa12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 PRDM10Q9NQV6 1147 aa12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 MKI67P46013 3256 aaKnown RBP12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 FKBP1AP62942 108 aaKnown RBP12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 PUM3Q15397 648 aaKnown RBP12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 CDAN1Q8IWY9 1227 aa12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 NAP1L5Q96NT1 182 aaPredicted RBP12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 DEFB129Q9H1M3 183 aa12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 TTF2Q9UNY4 1162 aaKnown RBP12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.03□□□□□ -0.48
NIF3L1-202ENST00000409020 RBM5P52756 815 aaKnown RBP eCLIP12.02□□□□□ -0.49
NIF3L1-202ENST00000409020 ATF7IPQ6VMQ6 1270 aa12.02□□□□□ -0.49
NIF3L1-202ENST00000409020 VPS37DQ86XT2 251 aa12.02□□□□□ -0.49
NIF3L1-202ENST00000409020 APOBEC3FQ8IUX4 373 aaKnown RBP12.02□□□□□ -0.49
NIF3L1-202ENST00000409020 ARHGAP45Q92619 1136 aa12.02□□□□□ -0.49
NIF3L1-202ENST00000409020 BEGAINQ9BUH8 593 aa12.02□□□□□ -0.49
NIF3L1-202ENST00000409020 VEZTQ9HBM0 779 aa12.02□□□□□ -0.49
NIF3L1-202ENST00000409020 SSUH2Q9Y2M2 353 aa12.02□□□□□ -0.49
NIF3L1-202ENST00000409020 ARAP2Q8WZ64 1704 aa12.01□□□□□ -0.49
NIF3L1-202ENST00000409020 MKRN3Q13064 507 aaKnown RBP12.01□□□□□ -0.49
NIF3L1-202ENST00000409020 TTLL12Q14166 644 aaPredicted RBP12.01□□□□□ -0.49
NIF3L1-202ENST00000409020 ADORA1P30542 326 aa12□□□□□ -0.49
NIF3L1-202ENST00000409020 MMP14P50281 582 aa12□□□□□ -0.49
NIF3L1-202ENST00000409020 PLCB2Q00722 1185 aa12□□□□□ -0.49
NIF3L1-202ENST00000409020 CAVIN4Q5BKX8 364 aa12□□□□□ -0.49
NIF3L1-202ENST00000409020 TMEM57Q8N5G2 664 aa12□□□□□ -0.49
NIF3L1-202ENST00000409020 CCDC102AQ96A19 550 aa12□□□□□ -0.49
NIF3L1-202ENST00000409020 CSRNP1Q96S65 589 aa12□□□□□ -0.49
NIF3L1-202ENST00000409020 TDRD3Q9H7E2 651 aaKnown RBP12□□□□□ -0.49
NIF3L1-202ENST00000409020 FRAT2O75474 233 aaPredicted RBP12□□□□□ -0.49
NIF3L1-202ENST00000409020 CRKP46108 304 aa12□□□□□ -0.49
NIF3L1-202ENST00000409020 FKBP1BP68106 108 aa12□□□□□ -0.49
NIF3L1-202ENST00000409020 SPDYE2Q495Y8 402 aa12□□□□□ -0.49
NIF3L1-202ENST00000409020 NBPF12Q5TAG4 269 aaPredicted RBP12□□□□□ -0.49
NIF3L1-202ENST00000409020 DZIP1LQ8IYY4 767 aaKnown RBP12□□□□□ -0.49
NIF3L1-202ENST00000409020 LPIN2Q92539 896 aa12□□□□□ -0.49
NIF3L1-202ENST00000409020 SERPINA10Q9UK55 444 aa12□□□□□ -0.49
NIF3L1-202ENST00000409020 NOP58Q9Y2X3 529 aaKnown RBP12□□□□□ -0.49
NIF3L1-202ENST00000409020 TNRC18O15417 2968 aaPredicted RBP12□□□□□ -0.49
NIF3L1-202ENST00000409020 SRGAP3O43295 1099 aa11.99□□□□□ -0.49
NIF3L1-202ENST00000409020 CIAO1O76071 339 aa11.99□□□□□ -0.49
NIF3L1-202ENST00000409020 IFIT1P09914 478 aaKnown RBP11.99□□□□□ -0.49
NIF3L1-202ENST00000409020 RLBP1P12271 317 aa11.99□□□□□ -0.49
NIF3L1-202ENST00000409020 CACNB3P54284 484 aa11.99□□□□□ -0.49
NIF3L1-202ENST00000409020 RASA3Q14644 834 aa11.99□□□□□ -0.49
NIF3L1-202ENST00000409020 ATP2B3Q16720 1220 aa11.99□□□□□ -0.49
NIF3L1-202ENST00000409020 CLMNQ96JQ2 1002 aa11.99□□□□□ -0.49
NIF3L1-202ENST00000409020 COPRSQ9NQ92 184 aa11.99□□□□□ -0.49
NIF3L1-202ENST00000409020 RNF186Q9NXI6 227 aa11.99□□□□□ -0.49
NIF3L1-202ENST00000409020 ZNF70Q9UC06 446 aaPredicted RBP11.99□□□□□ -0.49
NIF3L1-202ENST00000409020 ANGEL1Q9UNK9 670 aaKnown RBP11.99□□□□□ -0.49
NIF3L1-202ENST00000409020 ECM29Q5VYK3 1845 aa11.99□□□□□ -0.49
NIF3L1-202ENST00000409020 PNMA6EA0A0J9YXQ4 647 aa11.98□□□□□ -0.49
NIF3L1-202ENST00000409020 TRPA1O75762 1119 aa11.98□□□□□ -0.49
NIF3L1-202ENST00000409020 SLC5A1P13866 664 aa11.98□□□□□ -0.49
NIF3L1-202ENST00000409020 PHKA1P46020 1223 aa11.98□□□□□ -0.49
NIF3L1-202ENST00000409020 C1orf115Q9H7X2 142 aa11.98□□□□□ -0.49
NIF3L1-202ENST00000409020 ZBED9Q6R2W3 1325 aa11.98□□□□□ -0.49
NIF3L1-202ENST00000409020 TCP10L2B9ZVM9 353 aa11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 IPO8O15397 1037 aaKnown RBP11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 MYO1BO43795 1136 aa11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 GNAI3P08754 354 aa11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 IL15P40933 162 aaPredicted RBP11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 TIMM10P62072 90 aa11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 LDLRAD1Q5T700 205 aa11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 FAM43AQ8N2R8 423 aa11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 TEPSINQ96N21 525 aa11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 TMEM39BQ9GZU3 492 aa11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 BCCIPQ9P287 314 aaKnown RBP eCLIP11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 CEP126Q9P2H0 1117 aa11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 NAP1L2Q9ULW6 460 aaPredicted RBP11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 NF2P35240 595 aa11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 TFCP2Q12800 502 aa11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 MTX1Q13505 466 aa11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 DIXDC1Q155Q3 683 aa11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 ZKSCAN2Q63HK3 967 aa11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 APOBEC3HQ6NTF7 200 aaKnown RBP11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 IPO4Q8TEX9 1081 aaKnown RBP11.97□□□□□ -0.49
NIF3L1-202ENST00000409020 CASP8AP2Q9UKL3 1982 aa11.96□□□□□ -0.49
NIF3L1-202ENST00000409020 CA12O43570 354 aa11.96□□□□□ -0.5
NIF3L1-202ENST00000409020 GNAI2P04899 355 aa11.96□□□□□ -0.5
NIF3L1-202ENST00000409020 PRDX5P30044 214 aa11.96□□□□□ -0.5
NIF3L1-202ENST00000409020 TBC1D22AQ8WUA7 517 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms