RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 INCENPQ9NQS7 918 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 SLC12A7Q9Y666 1083 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 CARMIL3Q8ND23 1372 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 RGPD5Q99666 1765 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 ZBTB43O43298 467 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 MCAMP43121 646 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 CBX1P83916 185 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 EXOSC10Q01780 885 aaKnown RBP8.92□□□□□ -0.98
HDAC9-201ENST00000401921 ZFP91Q96JP5 570 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-201ENST00000401921 RAI14Q9P0K7 980 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 RCOR1Q9UKL0 485 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 MST1RQ04912 1400 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 CDKL5O76039 1030 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 SLC5A1P13866 664 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 CTSWP56202 376 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 CTDSPL2Q05D32 466 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 SART3Q15020 963 aaKnown RBP8.92□□□□□ -0.98
HDAC9-201ENST00000401921 TTLL11Q8NHH1 800 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 SMARCC2Q8TAQ2 1214 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 ISCA1Q9BUE6 129 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 GOLPH3LQ9H4A5 285 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 ARMT1Q9H993 441 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 DENND2AQ9ULE3 1009 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 KDM3BQ7LBC6 1761 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 MAP3K15Q6ZN16 1313 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 ZNF335Q9H4Z2 1342 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-201ENST00000401921 MBD4O95243 580 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 SERPINC1P01008 464 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 IGHMBP2P38935 993 aaKnown RBP8.92□□□□□ -0.98
HDAC9-201ENST00000401921 NDUFA8P51970 172 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 CCDC102BQ68D86 513 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 NLRP10Q86W26 655 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 HOMER1Q86YM7 354 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 MYRIPQ8NFW9 859 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 KIAA1524Q8TCG1 905 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 KCNG4Q8TDN1 519 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 NACAP1Q9BZK3 213 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 CGNQ9P2M7 1197 aaKnown RBP8.92□□□□□ -0.98
HDAC9-201ENST00000401921 MTMR7Q9Y216 660 aa8.92□□□□□ -0.98
HDAC9-201ENST00000401921 RIOK3O14730 519 aaKnown RBP8.91□□□□□ -0.98
HDAC9-201ENST00000401921 SKILP12757 684 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 LMOD1P29536 600 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-201ENST00000401921 MYSM1Q5VVJ2 828 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 TMC6Q7Z403 805 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 PDILTQ8N807 584 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 JMYQ8N9B5 988 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 CCDC112Q8NEF3 446 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 KCNF1Q9H3M0 494 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 ATG3Q9NT62 314 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 ANGEL1Q9UNK9 670 aaKnown RBP8.91□□□□□ -0.98
HDAC9-201ENST00000401921 MED1Q15648 1581 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-201ENST00000401921 PDE8AO60658 829 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 ATP6V1AP38606 617 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 SYKP43405 635 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 ARID5BQ14865 1188 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 SPECC1Q5M775 1068 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 TRIM22Q8IYM9 498 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 FBXO18Q8NFZ0 1043 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 WWC3Q9ULE0 1092 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 LMO7Q8WWI1 1683 aa8.91□□□□□ -0.98
HDAC9-201ENST00000401921 PDE8BO95263 885 aa8.9□□□□□ -0.98
HDAC9-201ENST00000401921 UQCRFS1P1P0C7P4 283 aa8.9□□□□□ -0.98
HDAC9-201ENST00000401921 PDE6AP16499 860 aa8.9□□□□□ -0.98
HDAC9-201ENST00000401921 MFSD6Q6ZSS7 791 aa8.9□□□□□ -0.98
HDAC9-201ENST00000401921 CMTR1Q8N1G2 835 aaKnown RBP8.9□□□□□ -0.98
HDAC9-201ENST00000401921 UBAC1Q9BSL1 405 aa8.9□□□□□ -0.98
HDAC9-201ENST00000401921 PIH1D3Q9NQM4 214 aaKnown RBP8.9□□□□□ -0.98
HDAC9-201ENST00000401921 SLC4A4Q9Y6R1 1079 aa8.9□□□□□ -0.98
HDAC9-201ENST00000401921 PALLDQ8WX93 1383 aa8.9□□□□□ -0.98
HDAC9-201ENST00000401921 ZNF202O95125 648 aa8.9□□□□□ -0.98
HDAC9-201ENST00000401921 CAVIN2O95810 425 aa8.9□□□□□ -0.98
HDAC9-201ENST00000401921 SSRP1Q08945 709 aaKnown RBP8.9□□□□□ -0.98
HDAC9-201ENST00000401921 SLC4A8Q2Y0W8 1093 aa8.9□□□□□ -0.98
HDAC9-201ENST00000401921 TAF3Q5VWG9 929 aa8.9□□□□□ -0.98
HDAC9-201ENST00000401921 ANO1Q5XXA6 986 aa8.9□□□□□ -0.98
HDAC9-201ENST00000401921 OLFM4Q6UX06 510 aa8.9□□□□□ -0.98
HDAC9-201ENST00000401921 CACTINQ8WUQ7 758 aaKnown RBP8.9□□□□□ -0.98
HDAC9-201ENST00000401921 SEC31BQ9NQW1 1179 aa8.9□□□□□ -0.98
HDAC9-201ENST00000401921 NIP7Q9Y221 180 aaKnown RBP eCLIP8.9□□□□□ -0.98
HDAC9-201ENST00000401921 SLIT3O75094 1523 aa8.9□□□□□ -0.98
HDAC9-201ENST00000401921 FDPSP14324 419 aaKnown RBP8.9□□□□□ -0.99
HDAC9-201ENST00000401921 PTPN14Q15678 1187 aa8.9□□□□□ -0.99
HDAC9-201ENST00000401921 CFAP100Q494V2 611 aa8.9□□□□□ -0.99
HDAC9-201ENST00000401921 KRT40Q6A162 431 aa8.9□□□□□ -0.99
HDAC9-201ENST00000401921 ADALQ6DHV7 355 aa8.9□□□□□ -0.99
HDAC9-201ENST00000401921 FAM177A1Q8N128 213 aaPredicted RBP8.9□□□□□ -0.99
HDAC9-201ENST00000401921 TDRD7Q8NHU6 1098 aaKnown RBP8.9□□□□□ -0.99
HDAC9-201ENST00000401921 IFNKQ9P0W0 207 aa8.9□□□□□ -0.99
HDAC9-201ENST00000401921 MARF1Q9Y4F3 1742 aaKnown RBP8.89□□□□□ -0.99
HDAC9-201ENST00000401921 SPDYE4A6NLX3 237 aa8.89□□□□□ -0.99
HDAC9-201ENST00000401921 ADD2P35612 726 aa8.89□□□□□ -0.99
HDAC9-201ENST00000401921 PDCL2Q8N4E4 241 aa8.89□□□□□ -0.99
HDAC9-201ENST00000401921 LINC00301Q8NCQ3 95 aa8.89□□□□□ -0.99
HDAC9-201ENST00000401921 CNNM3Q8NE01 707 aa8.89□□□□□ -0.99
HDAC9-201ENST00000401921 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.89□□□□□ -0.99
HDAC9-201ENST00000401921 V9GYY5 206 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-201ENST00000401921 RANBP6O60518 1105 aaKnown RBP8.89□□□□□ -0.99
HDAC9-201ENST00000401921 CYP7A1P22680 504 aa8.89□□□□□ -0.99
HDAC9-201ENST00000401921 BCAMP50895 628 aa8.89□□□□□ -0.99
HDAC9-201ENST00000401921 PUM3Q15397 648 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms