RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ZNF804BA4D1E1 1349 aa20.75■□□□□ 0.91
HLA-DQB1-204ENST00000399084 A0A0G2JLW4 131 aa20.74■□□□□ 0.91
HLA-DQB1-204ENST00000399084 KLF18A0A0U1RQI7 1052 aa20.74■□□□□ 0.91
HLA-DQB1-204ENST00000399084 CPLX1O14810 134 aa20.74■□□□□ 0.91
HLA-DQB1-204ENST00000399084 SEMA3EO15041 775 aa20.74■□□□□ 0.91
HLA-DQB1-204ENST00000399084 CTAGE5O15320 804 aa20.74■□□□□ 0.91
HLA-DQB1-204ENST00000399084 RPS6KA4O75676 772 aa20.74■□□□□ 0.91
HLA-DQB1-204ENST00000399084 PIP4K2BP78356 416 aa20.74■□□□□ 0.91
HLA-DQB1-204ENST00000399084 FAM98CQ17RN3 349 aaKnown RBP20.74■□□□□ 0.91
HLA-DQB1-204ENST00000399084 KRT23Q9C075 422 aa20.74■□□□□ 0.91
HLA-DQB1-204ENST00000399084 TFIP11Q9UBB9 837 aaKnown RBP20.74■□□□□ 0.91
HLA-DQB1-204ENST00000399084 SPATA31A6Q5VVP1 1343 aa20.74■□□□□ 0.91
HLA-DQB1-204ENST00000399084 KCNQ2O43526 872 aa20.73■□□□□ 0.91
HLA-DQB1-204ENST00000399084 MSNP26038 577 aaKnown RBP20.73■□□□□ 0.91
HLA-DQB1-204ENST00000399084 LIFRP42702 1097 aa20.73■□□□□ 0.91
HLA-DQB1-204ENST00000399084 ANTXR2P58335 489 aa20.73■□□□□ 0.91
HLA-DQB1-204ENST00000399084 BRAPQ7Z569 592 aa20.73■□□□□ 0.91
HLA-DQB1-204ENST00000399084 NARFQ9UHQ1 456 aa20.73■□□□□ 0.91
HLA-DQB1-204ENST00000399084 WWC3Q9ULE0 1092 aa20.73■□□□□ 0.91
HLA-DQB1-204ENST00000399084 PDS5AQ29RF7 1337 aaKnown RBP20.73■□□□□ 0.91
HLA-DQB1-204ENST00000399084 ADD1P35611 737 aaKnown RBP20.73■□□□□ 0.91
HLA-DQB1-204ENST00000399084 SGMS1Q86VZ5 419 aa20.73■□□□□ 0.91
HLA-DQB1-204ENST00000399084 IFNL3Q8IZI9 196 aa20.73■□□□□ 0.91
HLA-DQB1-204ENST00000399084 LINC00116Q8NCU8 138 aa20.73■□□□□ 0.91
HLA-DQB1-204ENST00000399084 NAPBQ9H115 298 aa20.73■□□□□ 0.91
HLA-DQB1-204ENST00000399084 NAP1L2Q9ULW6 460 aaPredicted RBP20.73■□□□□ 0.91
HLA-DQB1-204ENST00000399084 GOLGA8BA8MQT2 603 aa20.72■□□□□ 0.91
HLA-DQB1-204ENST00000399084 RCAN1P53805 252 aa20.72■□□□□ 0.91
HLA-DQB1-204ENST00000399084 TMTC2Q8N394 836 aa20.72■□□□□ 0.91
HLA-DQB1-204ENST00000399084 MAGEB6Q8N7X4 407 aa20.72■□□□□ 0.91
HLA-DQB1-204ENST00000399084 RNF214Q8ND24 703 aa20.72■□□□□ 0.91
HLA-DQB1-204ENST00000399084 FBXO18Q8NFZ0 1043 aa20.72■□□□□ 0.91
HLA-DQB1-204ENST00000399084 TNMDQ9H2S6 317 aa20.72■□□□□ 0.91
HLA-DQB1-204ENST00000399084 CLSTN2Q9H4D0 955 aa20.72■□□□□ 0.91
HLA-DQB1-204ENST00000399084 HPS5Q9UPZ3 1129 aa20.72■□□□□ 0.91
HLA-DQB1-204ENST00000399084 FDPSP14324 419 aaKnown RBP20.71■□□□□ 0.91
HLA-DQB1-204ENST00000399084 CAVIN4Q5BKX8 364 aa20.71■□□□□ 0.91
HLA-DQB1-204ENST00000399084 FAM173BQ6P4H8 233 aa20.71■□□□□ 0.91
HLA-DQB1-204ENST00000399084 CHST3Q7LGC8 479 aa20.71■□□□□ 0.91
HLA-DQB1-204ENST00000399084 RNF41Q9H4P4 317 aaPredicted RBP20.71■□□□□ 0.91
HLA-DQB1-204ENST00000399084 NCOA5Q9HCD5 579 aaKnown RBP20.71■□□□□ 0.91
HLA-DQB1-204ENST00000399084 FAM177BA6PVY3 158 aa20.7■□□□□ 0.9
HLA-DQB1-204ENST00000399084 SH2B2O14492 632 aaPredicted RBP20.7■□□□□ 0.9
HLA-DQB1-204ENST00000399084 C8orf76Q96K31 380 aa20.7■□□□□ 0.9
HLA-DQB1-204ENST00000399084 NBPF3Q9H094 633 aa20.7■□□□□ 0.9
HLA-DQB1-204ENST00000399084 DACT1Q9NYF0 836 aa20.7■□□□□ 0.9
HLA-DQB1-204ENST00000399084 RTEL1Q9NZ71 1219 aa20.7■□□□□ 0.9
HLA-DQB1-204ENST00000399084 ORC3Q9UBD5 711 aaPredicted RBP20.7■□□□□ 0.9
HLA-DQB1-204ENST00000399084 DENND2AQ9ULE3 1009 aa20.7■□□□□ 0.9
HLA-DQB1-204ENST00000399084 GIMAP6Q6P9H5 292 aa20.7■□□□□ 0.9
HLA-DQB1-204ENST00000399084 BICD2Q8TD16 824 aa20.7■□□□□ 0.9
HLA-DQB1-204ENST00000399084 LRP2BPQ9P2M1 347 aa20.7■□□□□ 0.9
HLA-DQB1-204ENST00000399084 SCN7AQ01118 1682 aa20.69■□□□□ 0.9
HLA-DQB1-204ENST00000399084 KDM4AO75164 1064 aa20.69■□□□□ 0.9
HLA-DQB1-204ENST00000399084 MBD4O95243 580 aa20.69■□□□□ 0.9
HLA-DQB1-204ENST00000399084 PCP11498 1178 aaKnown RBP20.69■□□□□ 0.9
HLA-DQB1-204ENST00000399084 LIG1P18858 919 aa20.69■□□□□ 0.9
HLA-DQB1-204ENST00000399084 GTF2E1P29083 439 aaPredicted RBP20.69■□□□□ 0.9
HLA-DQB1-204ENST00000399084 BCAMP50895 628 aa20.69■□□□□ 0.9
HLA-DQB1-204ENST00000399084 SART3Q15020 963 aaKnown RBP20.69■□□□□ 0.9
HLA-DQB1-204ENST00000399084 ERFEQ4G0M1 354 aa20.69■□□□□ 0.9
HLA-DQB1-204ENST00000399084 AKNAD1Q5T1N1 836 aa20.69■□□□□ 0.9
HLA-DQB1-204ENST00000399084 PGBD1Q96JS3 809 aa20.69■□□□□ 0.9
HLA-DQB1-204ENST00000399084 NLRP3Q96P20 1036 aa20.69■□□□□ 0.9
HLA-DQB1-204ENST00000399084 SETDB2Q96T68 719 aa20.69■□□□□ 0.9
HLA-DQB1-204ENST00000399084 ANKRD2Q9GZV1 360 aa20.69■□□□□ 0.9
HLA-DQB1-204ENST00000399084 MYH15Q9Y2K3 1946 aa20.68■□□□□ 0.9
HLA-DQB1-204ENST00000399084 GSG1L2A8MUP6 293 aa20.68■□□□□ 0.9
HLA-DQB1-204ENST00000399084 PPP2R5BQ15173 497 aa20.68■□□□□ 0.9
HLA-DQB1-204ENST00000399084 TPTE2Q6XPS3 522 aa20.68■□□□□ 0.9
HLA-DQB1-204ENST00000399084 TBC1D10CQ8IV04 446 aa20.68■□□□□ 0.9
HLA-DQB1-204ENST00000399084 IGDCC4Q8TDY8 1250 aa20.68■□□□□ 0.9
HLA-DQB1-204ENST00000399084 STAG1Q8WVM7 1258 aa20.68■□□□□ 0.9
HLA-DQB1-204ENST00000399084 C8orf37Q96NL8 207 aa20.68■□□□□ 0.9
HLA-DQB1-204ENST00000399084 ZNF500O60304 480 aaPredicted RBP20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 ZPR1O75312 459 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 YEATS4O95619 227 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 HMGB2P26583 209 aaKnown RBP20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 METAP2P50579 478 aaKnown RBP eCLIP20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 SYNE3Q6ZMZ3 975 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 MFSD6Q6ZSS7 791 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 FAM200AQ8TCP9 573 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 ZKSCAN5Q9Y2L8 839 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 TIAM2Q8IVF5 1701 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 NID2Q14112 1375 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 A0A1W2PQ27 194 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 A0A1W2PQ64 194 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 A0A1W2PQD8 194 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 TPM3P06753 285 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 NT5C2P49902 561 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 APOA5Q6Q788 366 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 KCNG4Q8TDN1 519 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 POLR3EQ9NVU0 708 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 ANAPC4Q9UJX5 808 aa20.67■□□□□ 0.9
HLA-DQB1-204ENST00000399084 STK36Q9NRP7 1315 aa20.66■□□□□ 0.9
HLA-DQB1-204ENST00000399084 ZBTB43O43298 467 aa20.66■□□□□ 0.9
HLA-DQB1-204ENST00000399084 DTNBO60941 627 aa20.66■□□□□ 0.9
HLA-DQB1-204ENST00000399084 CCDC73Q6ZRK6 1079 aa20.66■□□□□ 0.9
HLA-DQB1-204ENST00000399084 WASF1Q92558 559 aa20.66■□□□□ 0.9
HLA-DQB1-204ENST00000399084 MINPP1Q9UNW1 487 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms