RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 MIPOL1Q8TD10 442 aa19.16■□□□□ 0.66
SREBF1-203ENST00000395751 DTNBO60941 627 aa19.16■□□□□ 0.66
SREBF1-203ENST00000395751 LUC7L3O95232 432 aaKnown RBP19.16■□□□□ 0.66
SREBF1-203ENST00000395751 RPSAP08865 295 aaKnown RBP19.16■□□□□ 0.66
SREBF1-203ENST00000395751 NME9Q86XW9 330 aa19.16■□□□□ 0.66
SREBF1-203ENST00000395751 STMN2Q93045 179 aa19.16■□□□□ 0.66
SREBF1-203ENST00000395751 ZRANB1Q9UGI0 708 aa19.16■□□□□ 0.66
SREBF1-203ENST00000395751 KCNH3Q9ULD8 1083 aa19.16■□□□□ 0.66
SREBF1-203ENST00000395751 SNAPC4Q5SXM2 1469 aa19.16■□□□□ 0.66
SREBF1-203ENST00000395751 ATP1A2P50993 1020 aa19.16■□□□□ 0.66
SREBF1-203ENST00000395751 GNL3LQ9NVN8 582 aaKnown RBP19.16■□□□□ 0.66
SREBF1-203ENST00000395751 TRIM75PA6NK02 468 aa19.16■□□□□ 0.66
SREBF1-203ENST00000395751 CCDC51Q96ER9 411 aa19.16■□□□□ 0.66
SREBF1-203ENST00000395751 SLF1Q9BQI6 1058 aa19.16■□□□□ 0.66
SREBF1-203ENST00000395751 TRIM6Q9C030 488 aaPredicted RBP19.16■□□□□ 0.66
SREBF1-203ENST00000395751 RNF41Q9H4P4 317 aaPredicted RBP19.16■□□□□ 0.66
SREBF1-203ENST00000395751 EXOC1Q9NV70 894 aa19.16■□□□□ 0.66
SREBF1-203ENST00000395751 ANKRD65E5RJM6 399 aa19.15■□□□□ 0.66
SREBF1-203ENST00000395751 SRLQ86TD4 932 aa19.15■□□□□ 0.66
SREBF1-203ENST00000395751 MTRF1LQ9UGC7 380 aaKnown RBP19.15■□□□□ 0.66
SREBF1-203ENST00000395751 KIF3CO14782 793 aa19.15■□□□□ 0.66
SREBF1-203ENST00000395751 ERCC3P19447 782 aa19.15■□□□□ 0.66
SREBF1-203ENST00000395751 GKAP1Q5VSY0 366 aaPredicted RBP19.15■□□□□ 0.66
SREBF1-203ENST00000395751 SLC52A1Q9NWF4 448 aa19.15■□□□□ 0.66
SREBF1-203ENST00000395751 SLC27A2O14975 620 aa19.15■□□□□ 0.66
SREBF1-203ENST00000395751 WWC3Q9ULE0 1092 aa19.15■□□□□ 0.66
SREBF1-203ENST00000395751 HIP1RO75146 1068 aa19.15■□□□□ 0.66
SREBF1-203ENST00000395751 E2F5Q15329 346 aa19.15■□□□□ 0.66
SREBF1-203ENST00000395751 SECISBP2LQ93073 1101 aaKnown RBP19.15■□□□□ 0.66
SREBF1-203ENST00000395751 VPS16Q9H269 839 aa19.15■□□□□ 0.66
SREBF1-203ENST00000395751 MXRA7P84157 204 aa19.14■□□□□ 0.65
SREBF1-203ENST00000395751 ME3Q16798 604 aa19.14■□□□□ 0.65
SREBF1-203ENST00000395751 ADALQ6DHV7 355 aa19.14■□□□□ 0.65
SREBF1-203ENST00000395751 SMC6Q96SB8 1091 aa19.14■□□□□ 0.65
SREBF1-203ENST00000395751 GYS2P54840 703 aa19.14■□□□□ 0.65
SREBF1-203ENST00000395751 TXNDC2Q86VQ3 553 aa19.14■□□□□ 0.65
SREBF1-203ENST00000395751 KCNK9Q9NPC2 374 aa19.14■□□□□ 0.65
SREBF1-203ENST00000395751 STAT6P42226 847 aa19.14■□□□□ 0.65
SREBF1-203ENST00000395751 IQCA1Q86XH1 822 aa19.14■□□□□ 0.65
SREBF1-203ENST00000395751 CCDC26Q8TAB7 109 aa19.14■□□□□ 0.65
SREBF1-203ENST00000395751 ZCCHC17Q9NP64 241 aaKnown RBP19.13■□□□□ 0.65
SREBF1-203ENST00000395751 RNF10Q8N5U6 811 aaKnown RBP19.13■□□□□ 0.65
SREBF1-203ENST00000395751 CALML4Q96GE6 196 aa19.13■□□□□ 0.65
SREBF1-203ENST00000395751 PRC1O43663 620 aa19.13■□□□□ 0.65
SREBF1-203ENST00000395751 SLFN14P0C7P3 912 aa19.13■□□□□ 0.65
SREBF1-203ENST00000395751 SH3BGRP55822 239 aaPredicted RBP19.13■□□□□ 0.65
SREBF1-203ENST00000395751 ZC3H6P61129 1189 aaKnown RBP19.13■□□□□ 0.65
SREBF1-203ENST00000395751 IFT88Q13099 833 aa19.13■□□□□ 0.65
SREBF1-203ENST00000395751 PLEKHA4Q9H4M7 779 aa19.13■□□□□ 0.65
SREBF1-203ENST00000395751 A0A087WZG4 1122 aa19.13■□□□□ 0.65
SREBF1-203ENST00000395751 LRRD1A4D1F6 860 aa19.13■□□□□ 0.65
SREBF1-203ENST00000395751 STAMBPO95630 424 aa19.13■□□□□ 0.65
SREBF1-203ENST00000395751 CC2D1AQ6P1N0 951 aaPredicted RBP19.13■□□□□ 0.65
SREBF1-203ENST00000395751 PLVAPQ9BX97 442 aa19.13■□□□□ 0.65
SREBF1-203ENST00000395751 CXorf56Q9H5V9 222 aa19.13■□□□□ 0.65
SREBF1-203ENST00000395751 MSH6P52701 1360 aa19.13■□□□□ 0.65
SREBF1-203ENST00000395751 PRPHP41219 470 aa19.12■□□□□ 0.65
SREBF1-203ENST00000395751 RBM6P78332 1123 aaKnown RBP19.12■□□□□ 0.65
SREBF1-203ENST00000395751 CROCCP2Q86T23 111 aa19.12■□□□□ 0.65
SREBF1-203ENST00000395751 CCDC170Q8IYT3 715 aa19.12■□□□□ 0.65
SREBF1-203ENST00000395751 SAMM50Q9Y512 469 aa19.12■□□□□ 0.65
SREBF1-203ENST00000395751 UGGT2Q9NYU1 1516 aa19.12■□□□□ 0.65
SREBF1-203ENST00000395751 VSIG1Q86XK7 387 aa19.12■□□□□ 0.65
SREBF1-203ENST00000395751 TMEM87AQ8NBN3 555 aa19.12■□□□□ 0.65
SREBF1-203ENST00000395751 MINDY4BA8MYZ0 360 aa19.12■□□□□ 0.65
SREBF1-203ENST00000395751 CLTAP09496 248 aa19.12■□□□□ 0.65
SREBF1-203ENST00000395751 CASP8Q14790 479 aa19.12■□□□□ 0.65
SREBF1-203ENST00000395751 TMEM51Q9NW97 253 aa19.12■□□□□ 0.65
SREBF1-203ENST00000395751 MAP3K2Q9Y2U5 619 aa19.12■□□□□ 0.65
SREBF1-203ENST00000395751 CATIPQ7Z7H3 387 aa19.12■□□□□ 0.65
SREBF1-203ENST00000395751 MYD88Q99836 296 aa19.12■□□□□ 0.65
SREBF1-203ENST00000395751 LRP2BPQ9P2M1 347 aa19.12■□□□□ 0.65
SREBF1-203ENST00000395751 APBA1Q02410 837 aa19.11■□□□□ 0.65
SREBF1-203ENST00000395751 TMEM266Q2M3C6 531 aa19.11■□□□□ 0.65
SREBF1-203ENST00000395751 RGS22Q8NE09 1264 aa19.11■□□□□ 0.65
SREBF1-203ENST00000395751 NKIRAS1Q9NYS0 192 aa19.11■□□□□ 0.65
SREBF1-203ENST00000395751 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-203ENST00000395751 TRIM66O15016 1216 aa19.11■□□□□ 0.65
SREBF1-203ENST00000395751 SH2D4BQ5SQS7 431 aa19.11■□□□□ 0.65
SREBF1-203ENST00000395751 TCERG1LQ5VWI1 586 aa19.11■□□□□ 0.65
SREBF1-203ENST00000395751 IQUBQ8NA54 791 aa19.11■□□□□ 0.65
SREBF1-203ENST00000395751 NUDT16Q96DE0 195 aaKnown RBP19.11■□□□□ 0.65
SREBF1-203ENST00000395751 TRIM35Q9UPQ4 493 aa19.11■□□□□ 0.65
SREBF1-203ENST00000395751 FAM135AQ9P2D6 1515 aa19.11■□□□□ 0.65
SREBF1-203ENST00000395751 CTIFO43310 598 aaKnown RBP19.11■□□□□ 0.65
SREBF1-203ENST00000395751 SMIM24O75264 130 aa19.11■□□□□ 0.65
SREBF1-203ENST00000395751 KRT13P13646 458 aa19.11■□□□□ 0.65
SREBF1-203ENST00000395751 LONRF3Q496Y0 759 aa19.11■□□□□ 0.65
SREBF1-203ENST00000395751 GEMIN8Q9NWZ8 242 aaKnown RBP19.11■□□□□ 0.65
SREBF1-203ENST00000395751 JAK2O60674 1132 aa19.1■□□□□ 0.65
SREBF1-203ENST00000395751 RPUSD2Q8IZ73 545 aaKnown RBP19.1■□□□□ 0.65
SREBF1-203ENST00000395751 GBP5Q96PP8 586 aa19.1■□□□□ 0.65
SREBF1-203ENST00000395751 BICDL2A1A5D9 508 aa19.1■□□□□ 0.65
SREBF1-203ENST00000395751 KIF6Q6ZMV9 814 aa19.1■□□□□ 0.65
SREBF1-203ENST00000395751 ZNF710Q8N1W2 664 aa19.1■□□□□ 0.65
SREBF1-203ENST00000395751 SUDS3Q9H7L9 328 aaPredicted RBP19.1■□□□□ 0.65
SREBF1-203ENST00000395751 CUTAO60888 179 aa19.1■□□□□ 0.65
SREBF1-203ENST00000395751 TBC1D8BQ0IIM8 1120 aa19.1■□□□□ 0.65
SREBF1-203ENST00000395751 CFAP221Q4G0U5 840 aa19.1■□□□□ 0.65
SREBF1-203ENST00000395751 CHST3Q7LGC8 479 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms