RNA–Protein interactions for RNA: ENST00000394179.5

GSDMB-204, Transcript of gasdermin B, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMB, Length 1,427 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMB-204	ENST00000394179	PPP1R12B	O60237	982 aa	Predicted RBP	11.47	□□□□□ -0.57
GSDMB-204	ENST00000394179	BCAM	P50895	628 aa		11.47	□□□□□ -0.57
GSDMB-204	ENST00000394179	SUPT20HL1	Q3ZLR7	823 aa		11.47	□□□□□ -0.57
GSDMB-204	ENST00000394179	SPRYD7	Q5W111	196 aa		11.47	□□□□□ -0.57
GSDMB-204	ENST00000394179	SLC10A4	Q96EP9	437 aa		11.47	□□□□□ -0.57
GSDMB-204	ENST00000394179	CLMN	Q96JQ2	1002 aa		11.47	□□□□□ -0.57
GSDMB-204	ENST00000394179	TDRD3	Q9H7E2	651 aa	Known RBP	11.47	□□□□□ -0.57
GSDMB-204	ENST00000394179	NOB1	Q9ULX3	412 aa	Known RBP	11.47	□□□□□ -0.57
GSDMB-204	ENST00000394179	CRK	P46108	304 aa		11.46	□□□□□ -0.57
GSDMB-204	ENST00000394179	RFX5	P48382	616 aa	Predicted RBP	11.46	□□□□□ -0.57
GSDMB-204	ENST00000394179	SREBF2	Q12772	1141 aa		11.46	□□□□□ -0.57
GSDMB-204	ENST00000394179	MAP3K11	Q16584	847 aa		11.46	□□□□□ -0.57
GSDMB-204	ENST00000394179	SPDYE2	Q495Y8	402 aa		11.46	□□□□□ -0.57
GSDMB-204	ENST00000394179	DZIP1L	Q8IYY4	767 aa	Known RBP	11.46	□□□□□ -0.57
GSDMB-204	ENST00000394179	ZNF70	Q9UC06	446 aa	Predicted RBP	11.46	□□□□□ -0.57
GSDMB-204	ENST00000394179	MYH13	Q9UKX3	1938 aa		11.46	□□□□□ -0.57
GSDMB-204	ENST00000394179	TCP10L2	B9ZVM9	353 aa		11.45	□□□□□ -0.58
GSDMB-204	ENST00000394179	CCER2	I3L3R5	266 aa		11.45	□□□□□ -0.58
GSDMB-204	ENST00000394179	EYA2	O00167	538 aa		11.45	□□□□□ -0.58
GSDMB-204	ENST00000394179	USP2	O75604	605 aa	Predicted RBP	11.45	□□□□□ -0.58
GSDMB-204	ENST00000394179	PUM3	Q15397	648 aa	Known RBP	11.45	□□□□□ -0.58
GSDMB-204	ENST00000394179	CTU1	Q7Z7A3	348 aa	Known RBP	11.45	□□□□□ -0.58
GSDMB-204	ENST00000394179	CDAN1	Q8IWY9	1227 aa		11.45	□□□□□ -0.58
GSDMB-204	ENST00000394179	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.45	□□□□□ -0.58
GSDMB-204	ENST00000394179	PDE4DIP	Q5VU43	2346 aa		11.45	□□□□□ -0.58
GSDMB-204	ENST00000394179	IFIT1	P09914	478 aa	Known RBP	11.44	□□□□□ -0.58
GSDMB-204	ENST00000394179	CT47B1	P0C2W7	299 aa	Predicted RBP	11.44	□□□□□ -0.58
GSDMB-204	ENST00000394179	UBTFL1	P0CB47	393 aa	Predicted RBP	11.44	□□□□□ -0.58
GSDMB-204	ENST00000394179	FGFR2	P21802	821 aa		11.44	□□□□□ -0.58
GSDMB-204	ENST00000394179	IREB2	P48200	963 aa	Known RBP	11.44	□□□□□ -0.58
GSDMB-204	ENST00000394179	RGS19	P49795	217 aa		11.44	□□□□□ -0.58
GSDMB-204	ENST00000394179	TNFAIP1	Q13829	316 aa		11.44	□□□□□ -0.58
GSDMB-204	ENST00000394179	ATG9A	Q7Z3C6	839 aa		11.44	□□□□□ -0.58
GSDMB-204	ENST00000394179	TBC1D22A	Q8WUA7	517 aa		11.44	□□□□□ -0.58
GSDMB-204	ENST00000394179	SIL1	Q9H173	461 aa		11.44	□□□□□ -0.58
GSDMB-204	ENST00000394179	R3HDML	Q9H3Y0	253 aa		11.44	□□□□□ -0.58
GSDMB-204	ENST00000394179	OTOF	Q9HC10	1997 aa		11.44	□□□□□ -0.58
GSDMB-204	ENST00000394179	GPR25	O00155	361 aa		11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	CACNB3	P54284	484 aa		11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	MLLT1	Q03111	559 aa	Predicted RBP	11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	TEKT1	Q969V4	418 aa		11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	WNK4	Q96J92	1243 aa		11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	API5	Q9BZZ5	524 aa	Known RBP	11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	TMEM39B	Q9GZU3	492 aa		11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	MANSC4	A6NHS7	340 aa	Predicted RBP	11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	UNCX	A6NJT0	531 aa		11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	ZBTB48	P10074	688 aa	Predicted RBP	11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	SLC5A1	P13866	664 aa		11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	RARS	P54136	660 aa	Known RBP	11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	HDLBP	Q00341	1268 aa	Known RBP	11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	IFNL1	Q8IU54	200 aa		11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	ANKRD13A	Q8IZ07	590 aa		11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	LPIN2	Q92539	896 aa		11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	TEPSIN	Q96N21	525 aa		11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	LRRFIP2	Q9Y608	721 aa	Known RBP	11.43	□□□□□ -0.58
GSDMB-204	ENST00000394179	AK9	Q5TCS8	1911 aa		11.42	□□□□□ -0.58
GSDMB-204	ENST00000394179	MKI67	P46013	3256 aa	Known RBP	11.42	□□□□□ -0.58
GSDMB-204	ENST00000394179	ALDH1A1	P00352	501 aa		11.42	□□□□□ -0.58
GSDMB-204	ENST00000394179	GJA5	P36382	358 aa		11.42	□□□□□ -0.58
GSDMB-204	ENST00000394179	TNNI2	P48788	182 aa		11.42	□□□□□ -0.58
GSDMB-204	ENST00000394179	INHBE	P58166	350 aa		11.42	□□□□□ -0.58
GSDMB-204	ENST00000394179	ZDHHC15	Q96MV8	337 aa		11.42	□□□□□ -0.58
GSDMB-204	ENST00000394179	MEIS3	Q99687	375 aa		11.42	□□□□□ -0.58
GSDMB-204	ENST00000394179	ELP3	Q9H9T3	547 aa		11.42	□□□□□ -0.58
GSDMB-204	ENST00000394179	CEP126	Q9P2H0	1117 aa		11.42	□□□□□ -0.58
GSDMB-204	ENST00000394179	PA2G4	Q9UQ80	394 aa	Known RBP	11.42	□□□□□ -0.58
GSDMB-204	ENST00000394179	KIF16B	Q96L93	1317 aa		11.42	□□□□□ -0.58
GSDMB-204	ENST00000394179	LAMB1	P07942	1786 aa		11.41	□□□□□ -0.58
GSDMB-204	ENST00000394179	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
GSDMB-204	ENST00000394179	FKTN	O75072	461 aa		11.41	□□□□□ -0.58
GSDMB-204	ENST00000394179	CIAO1	O76071	339 aa		11.41	□□□□□ -0.58
GSDMB-204	ENST00000394179	BRCA2	P51587	3418 aa		11.41	□□□□□ -0.58
GSDMB-204	ENST00000394179	SOX10	P56693	466 aa		11.41	□□□□□ -0.58
GSDMB-204	ENST00000394179	ATP2B3	Q16720	1220 aa		11.41	□□□□□ -0.58
GSDMB-204	ENST00000394179	NOM1	Q5C9Z4	860 aa	Known RBP	11.41	□□□□□ -0.58
GSDMB-204	ENST00000394179	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.41	□□□□□ -0.58
GSDMB-204	ENST00000394179	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.41	□□□□□ -0.58
GSDMB-204	ENST00000394179	MRI	Q9BWK5	157 aa		11.41	□□□□□ -0.58
GSDMB-204	ENST00000394179	CFHR5	Q9BXR6	569 aa		11.41	□□□□□ -0.58
GSDMB-204	ENST00000394179	MAST3	O60307	1309 aa		11.4	□□□□□ -0.58
GSDMB-204	ENST00000394179	PKN2	Q16513	984 aa	Known RBP	11.4	□□□□□ -0.58
GSDMB-204	ENST00000394179	WDR66	Q8TBY9	1149 aa		11.4	□□□□□ -0.58
GSDMB-204	ENST00000394179	OPTN	Q96CV9	577 aa		11.4	□□□□□ -0.58
GSDMB-204	ENST00000394179	PTPN18	Q99952	460 aa		11.4	□□□□□ -0.58
GSDMB-204	ENST00000394179	TMOD2	Q9NZR1	351 aa		11.4	□□□□□ -0.58
GSDMB-204	ENST00000394179	HPS5	Q9UPZ3	1129 aa		11.4	□□□□□ -0.58
GSDMB-204	ENST00000394179	HDAC5	Q9UQL6	1122 aa		11.4	□□□□□ -0.58
GSDMB-204	ENST00000394179	SUGT1	Q9Y2Z0	365 aa		11.4	□□□□□ -0.58
GSDMB-204	ENST00000394179	ABCB7	O75027	752 aa		11.39	□□□□□ -0.59
GSDMB-204	ENST00000394179	IL15	P40933	162 aa	Predicted RBP	11.39	□□□□□ -0.59
GSDMB-204	ENST00000394179	VGLL4	Q14135	290 aa		11.39	□□□□□ -0.59
GSDMB-204	ENST00000394179	INTS3	Q68E01	1043 aa	Known RBP	11.39	□□□□□ -0.59
GSDMB-204	ENST00000394179	HHIPL2	Q6UWX4	724 aa		11.39	□□□□□ -0.59
GSDMB-204	ENST00000394179	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.39	□□□□□ -0.59
GSDMB-204	ENST00000394179	ARHGAP45	Q92619	1136 aa		11.39	□□□□□ -0.59
GSDMB-204	ENST00000394179	PRDX5	P30044	214 aa		11.38	□□□□□ -0.59
GSDMB-204	ENST00000394179	ADORA1	P30542	326 aa		11.38	□□□□□ -0.59
GSDMB-204	ENST00000394179	PHKA1	P46020	1223 aa		11.38	□□□□□ -0.59
GSDMB-204	ENST00000394179	MAP3K9	P80192	1104 aa		11.38	□□□□□ -0.59
GSDMB-204	ENST00000394179	DIXDC1	Q155Q3	683 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms