RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 MAP3K12Q12852 859 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 SLFNL1Q499Z3 407 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 SLC9C2Q5TAH2 1124 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.43□□□□□ -1.06
SMAD1-202ENST00000394092 MB21D2Q8IYB1 491 aaPredicted RBP8.43□□□□□ -1.06
SMAD1-202ENST00000394092 PUS7LQ9H0K6 701 aaKnown RBP8.43□□□□□ -1.06
SMAD1-202ENST00000394092 TNMDQ9H2S6 317 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 CPLX1O14810 134 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 CTAGE5O15320 804 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 ZNF500O60304 480 aaPredicted RBP8.43□□□□□ -1.06
SMAD1-202ENST00000394092 CDKL5O76039 1030 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 CCT2P78371 535 aaKnown RBP8.43□□□□□ -1.06
SMAD1-202ENST00000394092 TTLL5Q6EMB2 1281 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 INTS5Q6P9B9 1019 aaKnown RBP8.43□□□□□ -1.06
SMAD1-202ENST00000394092 GIMAP6Q6P9H5 292 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 CPLX2Q6PUV4 134 aaKnown RBP8.43□□□□□ -1.06
SMAD1-202ENST00000394092 SYNE4Q8N205 404 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 FAM200AQ8TCP9 573 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 AIDAQ96BJ3 306 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 CLSTN2Q9H4D0 955 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 ECM29Q5VYK3 1845 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 KLF18A0A0U1RQI7 1052 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 GOLGA8BA8MQT2 603 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 GOLGA6L6A8MZA4 724 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 FOXP2O15409 715 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 CAMTA2O94983 1202 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 ADAMTS2O95450 1211 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 CTDNEP1O95476 244 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 TPM3P06753 285 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 PDE6AP16499 860 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 GNAT2P19087 354 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 PHKA1P46020 1223 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 HAND2P61296 217 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 ALX1Q15699 326 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 TPRNQ4KMQ1 711 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 SUSD4Q5VX71 490 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 CLEC4GQ6UXB4 293 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 PI16Q6UXB8 463 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 RBM43Q6ZSC3 357 aaKnown RBP8.42□□□□□ -1.06
SMAD1-202ENST00000394092 SPATA5Q8NB90 893 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 TMEM87BQ96K49 555 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 NAP1L5Q96NT1 182 aaPredicted RBP8.42□□□□□ -1.06
SMAD1-202ENST00000394092 CDC5LQ99459 802 aaKnown RBP8.42□□□□□ -1.06
SMAD1-202ENST00000394092 DACT1Q9NYF0 836 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 ZNF532Q9HCE3 1301 aa8.42□□□□□ -1.06
SMAD1-202ENST00000394092 KDM4AO75164 1064 aa8.41□□□□□ -1.06
SMAD1-202ENST00000394092 NTSR2O95665 410 aa8.41□□□□□ -1.06
SMAD1-202ENST00000394092 APPP05067 770 aa8.41□□□□□ -1.06
SMAD1-202ENST00000394092 LIG1P18858 919 aa8.41□□□□□ -1.06
SMAD1-202ENST00000394092 FAM173BQ6P4H8 233 aa8.41□□□□□ -1.06
SMAD1-202ENST00000394092 SASS6Q6UVJ0 657 aa8.41□□□□□ -1.06
SMAD1-202ENST00000394092 CCDC73Q6ZRK6 1079 aa8.41□□□□□ -1.06
SMAD1-202ENST00000394092 BRAPQ7Z569 592 aa8.41□□□□□ -1.06
SMAD1-202ENST00000394092 MARCH10Q8NA82 808 aaPredicted RBP8.41□□□□□ -1.06
SMAD1-202ENST00000394092 CNNM2Q9H8M5 875 aa8.41□□□□□ -1.06
SMAD1-202ENST00000394092 PIH1D3Q9NQM4 214 aaKnown RBP8.41□□□□□ -1.06
SMAD1-202ENST00000394092 TFIP11Q9UBB9 837 aaKnown RBP8.41□□□□□ -1.06
SMAD1-202ENST00000394092 USP25Q9UHP3 1055 aa8.41□□□□□ -1.06
SMAD1-202ENST00000394092 ANGEL1Q9UNK9 670 aaKnown RBP8.41□□□□□ -1.06
SMAD1-202ENST00000394092 NIP7Q9Y221 180 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMAD1-202ENST00000394092 COL24A1Q17RW2 1714 aa8.41□□□□□ -1.06
SMAD1-202ENST00000394092 DTNBO60941 627 aa8.4□□□□□ -1.06
SMAD1-202ENST00000394092 ADCY5O95622 1261 aa8.4□□□□□ -1.06
SMAD1-202ENST00000394092 TYRO3Q06418 890 aa8.4□□□□□ -1.06
SMAD1-202ENST00000394092 KIAA2012Q0VF49 1180 aa8.4□□□□□ -1.06
SMAD1-202ENST00000394092 CHST3Q7LGC8 479 aa8.4□□□□□ -1.06
SMAD1-202ENST00000394092 ACSBG1Q96GR2 724 aa8.4□□□□□ -1.06
SMAD1-202ENST00000394092 C8orf76Q96K31 380 aa8.4□□□□□ -1.06
SMAD1-202ENST00000394092 NACAP1Q9BZK3 213 aa8.4□□□□□ -1.06
SMAD1-202ENST00000394092 NAPBQ9H115 298 aa8.4□□□□□ -1.06
SMAD1-202ENST00000394092 NCOA5Q9HCD5 579 aaKnown RBP8.4□□□□□ -1.06
SMAD1-202ENST00000394092 RCOR1Q9UKL0 485 aa8.4□□□□□ -1.06
SMAD1-202ENST00000394092 MYH6P13533 1939 aa8.4□□□□□ -1.06
SMAD1-202ENST00000394092 MAST2Q6P0Q8 1798 aa8.4□□□□□ -1.06
SMAD1-202ENST00000394092 A0A0G2JLW4 131 aa8.4□□□□□ -1.07
SMAD1-202ENST00000394092 TCRBV5S4A2TA0A5A2 114 aa8.4□□□□□ -1.07
SMAD1-202ENST00000394092 PATL2C9JE40 543 aaKnown RBP8.4□□□□□ -1.07
SMAD1-202ENST00000394092 TOM1O60784 492 aa8.4□□□□□ -1.07
SMAD1-202ENST00000394092 METAP2P50579 478 aaKnown RBP eCLIP8.4□□□□□ -1.07
SMAD1-202ENST00000394092 ANTXR2P58335 489 aa8.4□□□□□ -1.07
SMAD1-202ENST00000394092 RASGRF1Q13972 1273 aa8.4□□□□□ -1.07
SMAD1-202ENST00000394092 PGBD1Q96JS3 809 aa8.4□□□□□ -1.07
SMAD1-202ENST00000394092 MTA3Q9BTC8 594 aa8.4□□□□□ -1.07
SMAD1-202ENST00000394092 KRT23Q9C075 422 aa8.4□□□□□ -1.07
SMAD1-202ENST00000394092 GNL3LQ9NVN8 582 aaKnown RBP8.4□□□□□ -1.07
SMAD1-202ENST00000394092 ORC3Q9UBD5 711 aaPredicted RBP8.4□□□□□ -1.07
SMAD1-202ENST00000394092 WWC3Q9ULE0 1092 aa8.4□□□□□ -1.07
SMAD1-202ENST00000394092 NHSQ6T4R5 1651 aa8.4□□□□□ -1.07
SMAD1-202ENST00000394092 PNPLA7Q6ZV29 1317 aa8.39□□□□□ -1.07
SMAD1-202ENST00000394092 CCDC88AQ3V6T2 1871 aa8.39□□□□□ -1.07
SMAD1-202ENST00000394092 BCL9LQ86UU0 1499 aa8.39□□□□□ -1.07
SMAD1-202ENST00000394092 SH2B2O14492 632 aaPredicted RBP8.39□□□□□ -1.07
SMAD1-202ENST00000394092 KINO60870 393 aaKnown RBP8.39□□□□□ -1.07
SMAD1-202ENST00000394092 OFD1O75665 1012 aa8.39□□□□□ -1.07
SMAD1-202ENST00000394092 YEATS4O95619 227 aa8.39□□□□□ -1.07
SMAD1-202ENST00000394092 TPM2P07951 284 aa8.39□□□□□ -1.07
SMAD1-202ENST00000394092 TERF1P54274 439 aa8.39□□□□□ -1.07
SMAD1-202ENST00000394092 ITPK1Q13572 414 aa8.39□□□□□ -1.07
SMAD1-202ENST00000394092 SART3Q15020 963 aaKnown RBP8.39□□□□□ -1.07
SMAD1-202ENST00000394092 ANKRD18AQ8IVF6 992 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms