RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 CASP8AP2Q9UKL3 1982 aa16.25■□□□□ 0.19
RPAIN-202ENST00000381208 CCDC85CA6NKD9 419 aa16.25■□□□□ 0.19
RPAIN-202ENST00000381208 IFIT1P09914 478 aaKnown RBP16.25■□□□□ 0.19
RPAIN-202ENST00000381208 INHBEP58166 350 aa16.25■□□□□ 0.19
RPAIN-202ENST00000381208 PTPN12Q05209 780 aaKnown RBP16.25■□□□□ 0.19
RPAIN-202ENST00000381208 PUM3Q15397 648 aaKnown RBP16.25■□□□□ 0.19
RPAIN-202ENST00000381208 LRRC24Q50LG9 513 aa16.25■□□□□ 0.19
RPAIN-202ENST00000381208 NOM1Q5C9Z4 860 aaKnown RBP16.25■□□□□ 0.19
RPAIN-202ENST00000381208 VGLL2Q8N8G2 317 aa16.25■□□□□ 0.19
RPAIN-202ENST00000381208 CDCA7LQ96GN5 454 aa16.25■□□□□ 0.19
RPAIN-202ENST00000381208 VEZTQ9HBM0 779 aa16.25■□□□□ 0.19
RPAIN-202ENST00000381208 AKAP11Q9UKA4 1901 aa16.24■□□□□ 0.19
RPAIN-202ENST00000381208 ALDH1A1P00352 501 aa16.24■□□□□ 0.19
RPAIN-202ENST00000381208 UBTFL1P0CB47 393 aaPredicted RBP16.24■□□□□ 0.19
RPAIN-202ENST00000381208 IREB2P48200 963 aaKnown RBP16.24■□□□□ 0.19
RPAIN-202ENST00000381208 MRIQ9BWK5 157 aa16.24■□□□□ 0.19
RPAIN-202ENST00000381208 JAG2Q9Y219 1238 aa16.24■□□□□ 0.19
RPAIN-202ENST00000381208 CLRN2A0PK11 232 aa16.23■□□□□ 0.19
RPAIN-202ENST00000381208 EYA2O00167 538 aa16.23■□□□□ 0.19
RPAIN-202ENST00000381208 ZBTB48P10074 688 aaPredicted RBP16.23■□□□□ 0.19
RPAIN-202ENST00000381208 TNNI2P48788 182 aa16.23■□□□□ 0.19
RPAIN-202ENST00000381208 SPRYD7Q5W111 196 aa16.23■□□□□ 0.19
RPAIN-202ENST00000381208 SLC10A4Q96EP9 437 aa16.23■□□□□ 0.19
RPAIN-202ENST00000381208 CFHR5Q9BXR6 569 aa16.23■□□□□ 0.19
RPAIN-202ENST00000381208 MAST3O60307 1309 aa16.22■□□□□ 0.19
RPAIN-202ENST00000381208 MANSC4A6NHS7 340 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-202ENST00000381208 PRKG1Q13976 671 aa16.22■□□□□ 0.19
RPAIN-202ENST00000381208 RASA3Q14644 834 aa16.22■□□□□ 0.19
RPAIN-202ENST00000381208 PKN2Q16513 984 aaKnown RBP16.22■□□□□ 0.19
RPAIN-202ENST00000381208 CTU1Q7Z7A3 348 aaKnown RBP16.22■□□□□ 0.19
RPAIN-202ENST00000381208 DZIP1LQ8IYY4 767 aaKnown RBP16.22■□□□□ 0.19
RPAIN-202ENST00000381208 LPIN2Q92539 896 aa16.22■□□□□ 0.19
RPAIN-202ENST00000381208 SLC5A1P13866 664 aa16.21■□□□□ 0.19
RPAIN-202ENST00000381208 FGFR2P21802 821 aa16.21■□□□□ 0.19
RPAIN-202ENST00000381208 CRKP46108 304 aa16.21■□□□□ 0.19
RPAIN-202ENST00000381208 RGS19P49795 217 aa16.21■□□□□ 0.19
RPAIN-202ENST00000381208 ARHGAP45Q92619 1136 aa16.21■□□□□ 0.19
RPAIN-202ENST00000381208 ZNF70Q9UC06 446 aaPredicted RBP16.21■□□□□ 0.19
RPAIN-202ENST00000381208 NOB1Q9ULX3 412 aaKnown RBP16.21■□□□□ 0.19
RPAIN-202ENST00000381208 CIAO1O76071 339 aa16.2■□□□□ 0.18
RPAIN-202ENST00000381208 RFX5P48382 616 aaPredicted RBP16.2■□□□□ 0.18
RPAIN-202ENST00000381208 CHAF1AQ13111 956 aaPredicted RBP16.2■□□□□ 0.18
RPAIN-202ENST00000381208 ANKRD13AQ8IZ07 590 aa16.2■□□□□ 0.18
RPAIN-202ENST00000381208 WDR66Q8TBY9 1149 aa16.2■□□□□ 0.18
RPAIN-202ENST00000381208 TEKT1Q969V4 418 aa16.2■□□□□ 0.18
RPAIN-202ENST00000381208 PCDHAC2Q9Y5I4 1007 aa16.2■□□□□ 0.18
RPAIN-202ENST00000381208 ECM29Q5VYK3 1845 aa16.2■□□□□ 0.18
RPAIN-202ENST00000381208 BCAMP50895 628 aa16.19■□□□□ 0.18
RPAIN-202ENST00000381208 NBPF12Q5TAG4 269 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-202ENST00000381208 KLHDC4Q8TBB5 520 aa16.19■□□□□ 0.18
RPAIN-202ENST00000381208 HOOK2Q96ED9 719 aa16.19■□□□□ 0.18
RPAIN-202ENST00000381208 TDRD3Q9H7E2 651 aaKnown RBP16.19■□□□□ 0.18
RPAIN-202ENST00000381208 GNL3LQ9NVN8 582 aaKnown RBP16.19■□□□□ 0.18
RPAIN-202ENST00000381208 TMOD2Q9NZR1 351 aa16.19■□□□□ 0.18
RPAIN-202ENST00000381208 CEP126Q9P2H0 1117 aa16.19■□□□□ 0.18
RPAIN-202ENST00000381208 IPO8O15397 1037 aaKnown RBP16.18■□□□□ 0.18
RPAIN-202ENST00000381208 RARSP54136 660 aaKnown RBP16.18■□□□□ 0.18
RPAIN-202ENST00000381208 FKBP1CQ5VVH2 108 aa16.18■□□□□ 0.18
RPAIN-202ENST00000381208 OTUD7BQ6GQQ9 843 aa16.18■□□□□ 0.18
RPAIN-202ENST00000381208 IQSEC3Q9UPP2 1182 aaPredicted RBP16.18■□□□□ 0.18
RPAIN-202ENST00000381208 GPR25O00155 361 aa16.17■□□□□ 0.18
RPAIN-202ENST00000381208 USP2O75604 605 aaPredicted RBP16.17■□□□□ 0.18
RPAIN-202ENST00000381208 TBC1D8O95759 1140 aa16.17■□□□□ 0.18
RPAIN-202ENST00000381208 GNAI3P08754 354 aa16.17■□□□□ 0.18
RPAIN-202ENST00000381208 IL15P40933 162 aaPredicted RBP16.17■□□□□ 0.18
RPAIN-202ENST00000381208 MLLT1Q03111 559 aaPredicted RBP16.17■□□□□ 0.18
RPAIN-202ENST00000381208 MKRN3Q13064 507 aaKnown RBP16.17■□□□□ 0.18
RPAIN-202ENST00000381208 HHIPL2Q6UWX4 724 aa16.17■□□□□ 0.18
RPAIN-202ENST00000381208 WNK4Q96J92 1243 aa16.17■□□□□ 0.18
RPAIN-202ENST00000381208 ZDHHC15Q96MV8 337 aa16.17■□□□□ 0.18
RPAIN-202ENST00000381208 SSC5DA1L4H1 1573 aa16.17■□□□□ 0.18
RPAIN-202ENST00000381208 SEMA3EO15041 775 aa16.16■□□□□ 0.18
RPAIN-202ENST00000381208 ATG9AQ7Z3C6 839 aa16.16■□□□□ 0.18
RPAIN-202ENST00000381208 FAM83AQ86UY5 434 aa16.16■□□□□ 0.18
RPAIN-202ENST00000381208 ZNF296Q8WUU4 475 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-202ENST00000381208 ARAP2Q8WZ64 1704 aa16.15■□□□□ 0.18
RPAIN-202ENST00000381208 FKTNO75072 461 aa16.15■□□□□ 0.18
RPAIN-202ENST00000381208 CLCN6P51797 869 aa16.15■□□□□ 0.18
RPAIN-202ENST00000381208 ATP2B3Q16720 1220 aa16.15■□□□□ 0.18
RPAIN-202ENST00000381208 INTS3Q68E01 1043 aaKnown RBP16.15■□□□□ 0.18
RPAIN-202ENST00000381208 IFNL1Q8IU54 200 aa16.15■□□□□ 0.18
RPAIN-202ENST00000381208 COPRSQ9NQ92 184 aa16.15■□□□□ 0.18
RPAIN-202ENST00000381208 LRRFIP2Q9Y608 721 aaKnown RBP16.15■□□□□ 0.18
RPAIN-202ENST00000381208 AOX1Q06278 1338 aa16.15■□□□□ 0.18
RPAIN-202ENST00000381208 TCP10L2B9ZVM9 353 aa16.14■□□□□ 0.17
RPAIN-202ENST00000381208 CLMNQ96JQ2 1002 aa16.14■□□□□ 0.17
RPAIN-202ENST00000381208 TEPSINQ96N21 525 aa16.14■□□□□ 0.17
RPAIN-202ENST00000381208 CSADQ9Y600 493 aa16.14■□□□□ 0.17
RPAIN-202ENST00000381208 MAP3K9P80192 1104 aa16.13■□□□□ 0.17
RPAIN-202ENST00000381208 GRIK5Q16478 980 aa16.13■□□□□ 0.17
RPAIN-202ENST00000381208 ZGPATQ8N5A5 531 aaKnown RBP16.13■□□□□ 0.17
RPAIN-202ENST00000381208 SIL1Q9H173 461 aa16.13■□□□□ 0.17
RPAIN-202ENST00000381208 DENND2AQ9ULE3 1009 aa16.13■□□□□ 0.17
RPAIN-202ENST00000381208 FZD1Q9UP38 647 aa16.13■□□□□ 0.17
RPAIN-202ENST00000381208 TESPA1A2RU30 521 aaPredicted RBP16.13■□□□□ 0.17
RPAIN-202ENST00000381208 DCAF15Q66K64 600 aa16.13■□□□□ 0.17
RPAIN-202ENST00000381208 APOBEC3HQ6NTF7 200 aaKnown RBP16.13■□□□□ 0.17
RPAIN-202ENST00000381208 MEIS3Q99687 375 aa16.13■□□□□ 0.17
RPAIN-202ENST00000381208 TMEM39BQ9GZU3 492 aa16.13■□□□□ 0.17
RPAIN-202ENST00000381208 SALL1Q9NSC2 1324 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms