RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 TEFQ10587 303 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 AKAP4Q5JQC9 854 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 DEFB132Q7Z7B7 95 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 METTL16Q86W50 562 aaKnown RBP7.32□□□□□ -1.24
SSX1-201ENST00000376919 CCDC146Q8IYE0 955 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 SLC43A3Q8NBI5 491 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 RNF34Q969K3 372 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 DCAF5Q96JK2 942 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 PRKD2Q9BZL6 878 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 CCSER2Q9H7U1 834 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 ZNF358Q9NW07 568 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 PARP2Q9UGN5 583 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 TLL2Q9Y6L7 1015 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 BCL9O00512 1426 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 NUP188Q5SRE5 1749 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 GNAT3A8MTJ3 354 aa7.31□□□□□ -1.24
SSX1-201ENST00000376919 KCNQ2O43526 872 aa7.31□□□□□ -1.24
SSX1-201ENST00000376919 FSHRP23945 695 aa7.31□□□□□ -1.24
SSX1-201ENST00000376919 ERVK-9P63128 1117 aa7.31□□□□□ -1.24
SSX1-201ENST00000376919 PLCB3Q01970 1234 aa7.31□□□□□ -1.24
SSX1-201ENST00000376919 DHX9Q08211 1270 aaKnown RBP7.31□□□□□ -1.24
SSX1-201ENST00000376919 DSC3Q14574 896 aa7.31□□□□□ -1.24
SSX1-201ENST00000376919 MTHFSDQ2M296 383 aaKnown RBP7.31□□□□□ -1.24
SSX1-201ENST00000376919 GIMAP6Q6P9H5 292 aa7.31□□□□□ -1.24
SSX1-201ENST00000376919 NOP9Q86U38 636 aaKnown RBP7.31□□□□□ -1.24
SSX1-201ENST00000376919 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.31□□□□□ -1.24
SSX1-201ENST00000376919 VTI1AQ96AJ9 217 aa7.31□□□□□ -1.24
SSX1-201ENST00000376919 DUSP9Q99956 384 aaKnown RBP7.31□□□□□ -1.24
SSX1-201ENST00000376919 CUEDC1Q9NWM3 386 aaPredicted RBP7.31□□□□□ -1.24
SSX1-201ENST00000376919 LY75O60449 1722 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 KDM6AO15550 1401 aaPredicted RBP7.3□□□□□ -1.24
SSX1-201ENST00000376919 ANKRD62A6NC57 917 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 ADH1CP00326 375 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 MAPK8P45983 427 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 SCTRP47872 440 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 DAB2P98082 770 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 FANCCQ00597 558 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 ATP2B2Q01814 1243 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 EHHADHQ08426 723 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 LMOD3Q0VAK6 560 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 EZH2Q15910 746 aaKnown RBP7.3□□□□□ -1.24
SSX1-201ENST00000376919 SPRYD7Q5W111 196 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 CC2D2BQ6DHV5 1058 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 ALKBH2Q6NS38 261 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 FAM9BQ8IZU0 186 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 ARMC5Q96C12 935 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 MRGPRX2Q96LB1 330 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 VTI1BQ9UEU0 232 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 PRKAG2Q9UGJ0 569 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 C5P01031 1676 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 PALLDQ8WX93 1383 aa7.3□□□□□ -1.24
SSX1-201ENST00000376919 PSMD2Q13200 908 aa7.29□□□□□ -1.24
SSX1-201ENST00000376919 NR5A1Q13285 461 aa7.29□□□□□ -1.24
SSX1-201ENST00000376919 C16orf46Q6P387 395 aa7.29□□□□□ -1.24
SSX1-201ENST00000376919 TTC5Q8N0Z6 440 aa7.29□□□□□ -1.24
SSX1-201ENST00000376919 SMARCC1Q92922 1105 aaPredicted RBP7.29□□□□□ -1.24
SSX1-201ENST00000376919 RUNDC1Q96C34 613 aa7.29□□□□□ -1.24
SSX1-201ENST00000376919 FAM161BQ96MY7 647 aa7.29□□□□□ -1.24
SSX1-201ENST00000376919 DNAJC2Q99543 621 aaKnown RBP7.29□□□□□ -1.24
SSX1-201ENST00000376919 LNPKQ9C0E8 428 aa7.29□□□□□ -1.24
SSX1-201ENST00000376919 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.29□□□□□ -1.247e-6■■■■■ 74.5
SSX1-201ENST00000376919 SIPA1L3O60292 1781 aaPredicted RBP7.28□□□□□ -1.24
SSX1-201ENST00000376919 PAPPAQ13219 1627 aa7.28□□□□□ -1.24
SSX1-201ENST00000376919 ERVV-2B6SEH9 535 aa7.28□□□□□ -1.24
SSX1-201ENST00000376919 RNMTO43148 476 aaKnown RBP7.28□□□□□ -1.24
SSX1-201ENST00000376919 ATP2B1P20020 1258 aa7.28□□□□□ -1.24
SSX1-201ENST00000376919 ZNF76P36508 570 aa7.28□□□□□ -1.24
SSX1-201ENST00000376919 GNL2Q13823 731 aaKnown RBP7.28□□□□□ -1.24
SSX1-201ENST00000376919 NFE2L2Q16236 605 aa7.28□□□□□ -1.24
SSX1-201ENST00000376919 PTF1AQ7RTS3 328 aa7.28□□□□□ -1.24
SSX1-201ENST00000376919 CCDC116Q8IYX3 515 aa7.28□□□□□ -1.24
SSX1-201ENST00000376919 SCG3Q8WXD2 468 aaKnown RBP7.28□□□□□ -1.24
SSX1-201ENST00000376919 PHACTR3Q96KR7 559 aa7.28□□□□□ -1.24
SSX1-201ENST00000376919 FAM129BQ96TA1 746 aa7.28□□□□□ -1.24
SSX1-201ENST00000376919 CHMP4AQ9BY43 222 aa7.28□□□□□ -1.24
SSX1-201ENST00000376919 CAPN10Q9HC96 672 aa7.28□□□□□ -1.24
SSX1-201ENST00000376919 TMPRSS4Q9NRS4 437 aa7.28□□□□□ -1.24
SSX1-201ENST00000376919 CCNL1Q9UK58 526 aaPredicted RBP7.28□□□□□ -1.24
SSX1-201ENST00000376919 ADAMTS8Q9UP79 889 aa7.28□□□□□ -1.24
SSX1-201ENST00000376919 TMA7Q9Y2S6 64 aaKnown RBP7.28□□□□□ -1.24
SSX1-201ENST00000376919 RRP7AQ9Y3A4 280 aaKnown RBP7.28□□□□□ -1.24
SSX1-201ENST00000376919 MRC1P22897 1456 aa7.28□□□□□ -1.24
SSX1-201ENST00000376919 ADAMTS7Q9UKP4 1686 aa7.28□□□□□ -1.24
SSX1-201ENST00000376919 BACH1O14867 736 aa7.27□□□□□ -1.25
SSX1-201ENST00000376919 PLSCR1O15162 318 aa7.27□□□□□ -1.25
SSX1-201ENST00000376919 HMGB2P26583 209 aaKnown RBP7.27□□□□□ -1.25
SSX1-201ENST00000376919 EIF1AXP47813 144 aaKnown RBP7.27□□□□□ -1.25
SSX1-201ENST00000376919 RIPK4P57078 832 aa7.27□□□□□ -1.25
SSX1-201ENST00000376919 TXNRD1Q16881 649 aa7.27□□□□□ -1.25
SSX1-201ENST00000376919 CCDC184Q52MB2 194 aa7.27□□□□□ -1.25
SSX1-201ENST00000376919 PPP1R26Q5T8A7 1209 aaPredicted RBP7.27□□□□□ -1.25
SSX1-201ENST00000376919 MCM10Q7L590 875 aa7.27□□□□□ -1.25
SSX1-201ENST00000376919 ZNF598Q86UK7 904 aaKnown RBP7.27□□□□□ -1.25
SSX1-201ENST00000376919 ZNF784Q8NCA9 323 aaPredicted RBP7.27□□□□□ -1.25
SSX1-201ENST00000376919 PIGBQ92521 554 aa7.27□□□□□ -1.25
SSX1-201ENST00000376919 ALKBH8Q96BT7 664 aaKnown RBP7.27□□□□□ -1.25
SSX1-201ENST00000376919 OSBPL3Q9H4L5 887 aa7.27□□□□□ -1.25
SSX1-201ENST00000376919 SLC52A2Q9HAB3 445 aa7.27□□□□□ -1.25
SSX1-201ENST00000376919 CYLDQ9NQC7 956 aa7.27□□□□□ -1.25
SSX1-201ENST00000376919 STK32BQ9NY57 414 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms