RNA–Protein interactions for RNA: ENST00000375779.6

CLIC1-206, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIC1, Length 1,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-206ENST00000375779 RASA3Q14644 834 aa18.34■□□□□ 0.53
CLIC1-206ENST00000375779 CAVIN4Q5BKX8 364 aa18.34■□□□□ 0.53
CLIC1-206ENST00000375779 ARAP2Q8WZ64 1704 aa18.34■□□□□ 0.53
CLIC1-206ENST00000375779 ZBTB48P10074 688 aaPredicted RBP18.33■□□□□ 0.52
CLIC1-206ENST00000375779 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.52
CLIC1-206ENST00000375779 DGKZQ13574 1117 aa18.33■□□□□ 0.52
CLIC1-206ENST00000375779 PUM3Q15397 648 aaKnown RBP18.33■□□□□ 0.52
CLIC1-206ENST00000375779 LPIN2Q92539 896 aa18.33■□□□□ 0.52
CLIC1-206ENST00000375779 API5Q9BZZ5 524 aaKnown RBP18.33■□□□□ 0.52
CLIC1-206ENST00000375779 ANGEL1Q9UNK9 670 aaKnown RBP18.33■□□□□ 0.52
CLIC1-206ENST00000375779 CLRN2A0PK11 232 aa18.32■□□□□ 0.52
CLIC1-206ENST00000375779 CRKP46108 304 aa18.32■□□□□ 0.52
CLIC1-206ENST00000375779 TNFAIP1Q13829 316 aa18.32■□□□□ 0.52
CLIC1-206ENST00000375779 TTLL12Q14166 644 aaPredicted RBP18.32■□□□□ 0.52
CLIC1-206ENST00000375779 FKBP1CQ5VVH2 108 aa18.32■□□□□ 0.52
CLIC1-206ENST00000375779 SLC10A4Q96EP9 437 aa18.32■□□□□ 0.52
CLIC1-206ENST00000375779 ZDHHC15Q96MV8 337 aa18.32■□□□□ 0.52
CLIC1-206ENST00000375779 TDRD3Q9H7E2 651 aaKnown RBP18.32■□□□□ 0.52
CLIC1-206ENST00000375779 COPRSQ9NQ92 184 aa18.32■□□□□ 0.52
CLIC1-206ENST00000375779 FZD1Q9UP38 647 aa18.32■□□□□ 0.52
CLIC1-206ENST00000375779 HDAC5Q9UQL6 1122 aa18.32■□□□□ 0.52
CLIC1-206ENST00000375779 TESPA1A2RU30 521 aaPredicted RBP18.31■□□□□ 0.52
CLIC1-206ENST00000375779 IFIT1P09914 478 aaKnown RBP18.31■□□□□ 0.52
CLIC1-206ENST00000375779 MTX1Q13505 466 aa18.31■□□□□ 0.52
CLIC1-206ENST00000375779 APOBEC3HQ6NTF7 200 aaKnown RBP18.31■□□□□ 0.52
CLIC1-206ENST00000375779 HHIPL2Q6UWX4 724 aa18.31■□□□□ 0.52
CLIC1-206ENST00000375779 HTTP42858 3142 aa18.3■□□□□ 0.52
CLIC1-206ENST00000375779 UBTFL1P0CB47 393 aaPredicted RBP18.3■□□□□ 0.52
CLIC1-206ENST00000375779 SREBF2Q12772 1141 aa18.3■□□□□ 0.52
CLIC1-206ENST00000375779 PRKG1Q13976 671 aa18.3■□□□□ 0.52
CLIC1-206ENST00000375779 VPS37DQ86XT2 251 aa18.3■□□□□ 0.52
CLIC1-206ENST00000375779 CLMNQ96JQ2 1002 aa18.3■□□□□ 0.52
CLIC1-206ENST00000375779 TNRC18O15417 2968 aaPredicted RBP18.3■□□□□ 0.52
CLIC1-206ENST00000375779 MANSC4A6NHS7 340 aaPredicted RBP18.29■□□□□ 0.52
CLIC1-206ENST00000375779 RBM5P52756 815 aaKnown RBP eCLIP18.29■□□□□ 0.52
CLIC1-206ENST00000375779 R3HDMLQ9H3Y0 253 aa18.29■□□□□ 0.52
CLIC1-206ENST00000375779 IQSEC3Q9UPP2 1182 aaPredicted RBP18.29■□□□□ 0.52
CLIC1-206ENST00000375779 GPR25O00155 361 aa18.28■□□□□ 0.52
CLIC1-206ENST00000375779 TBC1D8O95759 1140 aa18.28■□□□□ 0.52
CLIC1-206ENST00000375779 ALDH1A1P00352 501 aa18.28■□□□□ 0.52
CLIC1-206ENST00000375779 GJA5P36382 358 aa18.28■□□□□ 0.52
CLIC1-206ENST00000375779 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.28■□□□□ 0.52
CLIC1-206ENST00000375779 CTU1Q7Z7A3 348 aaKnown RBP18.28■□□□□ 0.52
CLIC1-206ENST00000375779 FAM83AQ86UY5 434 aa18.28■□□□□ 0.52
CLIC1-206ENST00000375779 ANKRD13AQ8IZ07 590 aa18.28■□□□□ 0.52
CLIC1-206ENST00000375779 WDR66Q8TBY9 1149 aa18.28■□□□□ 0.52
CLIC1-206ENST00000375779 ZNF296Q8WUU4 475 aaPredicted RBP18.28■□□□□ 0.52
CLIC1-206ENST00000375779 WNK4Q96J92 1243 aa18.28■□□□□ 0.52
CLIC1-206ENST00000375779 MEIS3Q99687 375 aa18.28■□□□□ 0.52
CLIC1-206ENST00000375779 VEZTQ9HBM0 779 aa18.28■□□□□ 0.52
CLIC1-206ENST00000375779 CENPFP49454 3210 aa18.28■□□□□ 0.52
CLIC1-206ENST00000375779 CCDC85CA6NKD9 419 aa18.27■□□□□ 0.52
CLIC1-206ENST00000375779 IL15P40933 162 aaPredicted RBP18.27■□□□□ 0.52
CLIC1-206ENST00000375779 IREB2P48200 963 aaKnown RBP18.27■□□□□ 0.52
CLIC1-206ENST00000375779 PKN2Q16513 984 aaKnown RBP18.27■□□□□ 0.52
CLIC1-206ENST00000375779 IFNL1Q8IU54 200 aa18.27■□□□□ 0.52
CLIC1-206ENST00000375779 CDAN1Q8IWY9 1227 aa18.27■□□□□ 0.52
CLIC1-206ENST00000375779 TEKT1Q969V4 418 aa18.27■□□□□ 0.52
CLIC1-206ENST00000375779 MS4A4AQ96JQ5 239 aa18.27■□□□□ 0.52
CLIC1-206ENST00000375779 CEP126Q9P2H0 1117 aa18.27■□□□□ 0.52
CLIC1-206ENST00000375779 LRRFIP2Q9Y608 721 aaKnown RBP18.27■□□□□ 0.52
CLIC1-206ENST00000375779 SALL1Q9NSC2 1324 aa18.26■□□□□ 0.51
CLIC1-206ENST00000375779 SLC5A1P13866 664 aa18.26■□□□□ 0.51
CLIC1-206ENST00000375779 TMEM39BQ9GZU3 492 aa18.26■□□□□ 0.51
CLIC1-206ENST00000375779 IGF2BP3O00425 579 aaKnown RBP eCLIP18.25■□□□□ 0.51
CLIC1-206ENST00000375779 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.25■□□□□ 0.512e-54■□□□□ 8.9
CLIC1-206ENST00000375779 PTPN18Q99952 460 aa18.25■□□□□ 0.51
CLIC1-206ENST00000375779 MAST3O60307 1309 aa18.24■□□□□ 0.51
CLIC1-206ENST00000375779 SEMA3EO15041 775 aa18.24■□□□□ 0.51
CLIC1-206ENST00000375779 FRAT2O75474 233 aaPredicted RBP18.24■□□□□ 0.51
CLIC1-206ENST00000375779 GNAI3P08754 354 aa18.24■□□□□ 0.51
CLIC1-206ENST00000375779 TRIM27P14373 513 aa18.24■□□□□ 0.51
CLIC1-206ENST00000375779 TNNI2P48788 182 aa18.24■□□□□ 0.51
CLIC1-206ENST00000375779 MAP3K9P80192 1104 aa18.24■□□□□ 0.51
CLIC1-206ENST00000375779 MKRN3Q13064 507 aaKnown RBP18.24■□□□□ 0.51
CLIC1-206ENST00000375779 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
CLIC1-206ENST00000375779 PA2G4Q9UQ80 394 aaKnown RBP18.24■□□□□ 0.51
CLIC1-206ENST00000375779 TCP10L2B9ZVM9 353 aa18.23■□□□□ 0.51
CLIC1-206ENST00000375779 IPO8O15397 1037 aaKnown RBP18.23■□□□□ 0.51
CLIC1-206ENST00000375779 ATP2B3Q16720 1220 aa18.23■□□□□ 0.51
CLIC1-206ENST00000375779 ATF7IPQ6VMQ6 1270 aa18.23■□□□□ 0.51
CLIC1-206ENST00000375779 PDS5AQ29RF7 1337 aaKnown RBP18.23■□□□□ 0.51
CLIC1-206ENST00000375779 RPAP1Q9BWH6 1393 aaPredicted RBP18.22■□□□□ 0.51
CLIC1-206ENST00000375779 BCAR3O75815 825 aa18.22■□□□□ 0.51
CLIC1-206ENST00000375779 FAM163AQ96GL9 167 aaPredicted RBP18.22■□□□□ 0.51
CLIC1-206ENST00000375779 SIL1Q9H173 461 aa18.22■□□□□ 0.51
CLIC1-206ENST00000375779 OTOFQ9HC10 1997 aa18.22■□□□□ 0.51
CLIC1-206ENST00000375779 FKTNO75072 461 aa18.21■□□□□ 0.51
CLIC1-206ENST00000375779 PHKA1P46020 1223 aa18.21■□□□□ 0.51
CLIC1-206ENST00000375779 MLLT1Q03111 559 aaPredicted RBP18.21■□□□□ 0.51
CLIC1-206ENST00000375779 RNF39Q9H2S5 420 aa18.21■□□□□ 0.51
CLIC1-206ENST00000375779 ZNF112Q9UJU3 913 aa18.21■□□□□ 0.51
CLIC1-206ENST00000375779 DENND2AQ9ULE3 1009 aa18.21■□□□□ 0.51
CLIC1-206ENST00000375779 DAGLAQ9Y4D2 1042 aa18.21■□□□□ 0.51
CLIC1-206ENST00000375779 MYH13Q9UKX3 1938 aa18.21■□□□□ 0.51
CLIC1-206ENST00000375779 MKI67P46013 3256 aaKnown RBP18.2■□□□□ 0.5
CLIC1-206ENST00000375779 PRDX5P30044 214 aa18.2■□□□□ 0.5
CLIC1-206ENST00000375779 TIMM10P62072 90 aa18.2■□□□□ 0.5
CLIC1-206ENST00000375779 MAP3K10Q02779 954 aa18.2■□□□□ 0.5
CLIC1-206ENST00000375779 CCDC102BQ68D86 513 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms