RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 FAM161BQ96MY7 647 aa16.09■□□□□ 0.17
HDAC8-204ENST00000373560 CPA4Q9UI42 421 aa16.09■□□□□ 0.17
HDAC8-204ENST00000373560 MYPNQ86TC9 1320 aa16.09■□□□□ 0.17
HDAC8-204ENST00000373560 A0A1B0GUL6 1792 aa16.08■□□□□ 0.17
HDAC8-204ENST00000373560 SGPL1O95470 568 aa16.08■□□□□ 0.16
HDAC8-204ENST00000373560 MAGEA10P43363 369 aaPredicted RBP16.08■□□□□ 0.16
HDAC8-204ENST00000373560 PSMC4P43686 418 aa16.08■□□□□ 0.16
HDAC8-204ENST00000373560 PRMT2P55345 433 aa16.08■□□□□ 0.16
HDAC8-204ENST00000373560 RASA3Q14644 834 aa16.08■□□□□ 0.16
HDAC8-204ENST00000373560 SUPT20HL1Q3ZLR7 823 aa16.08■□□□□ 0.16
HDAC8-204ENST00000373560 PRMT6Q96LA8 375 aaPredicted RBP16.08■□□□□ 0.16
HDAC8-204ENST00000373560 DDX60LQ5H9U9 1706 aaKnown RBP16.08■□□□□ 0.16
HDAC8-204ENST00000373560 F8W031 263 aaPredicted RBP16.07■□□□□ 0.16
HDAC8-204ENST00000373560 GTF2A2P52657 109 aa16.07■□□□□ 0.16
HDAC8-204ENST00000373560 PRKCZQ05513 592 aa16.07■□□□□ 0.16
HDAC8-204ENST00000373560 NFE2L2Q16236 605 aa16.07■□□□□ 0.16
HDAC8-204ENST00000373560 CFAP100Q494V2 611 aa16.07■□□□□ 0.16
HDAC8-204ENST00000373560 C17orf99Q6UX52 265 aa16.07■□□□□ 0.16
HDAC8-204ENST00000373560 ANKRD18AQ8IVF6 992 aa16.07■□□□□ 0.16
HDAC8-204ENST00000373560 TDHQ8IZJ6 230 aa16.07■□□□□ 0.16
HDAC8-204ENST00000373560 PLEKHF1Q96S99 279 aa16.07■□□□□ 0.16
HDAC8-204ENST00000373560 COA1Q9GZY4 146 aa16.07■□□□□ 0.16
HDAC8-204ENST00000373560 BIN2Q9UBW5 565 aaPredicted RBP16.07■□□□□ 0.16
HDAC8-204ENST00000373560 GABRQQ9UN88 632 aa16.07■□□□□ 0.16
HDAC8-204ENST00000373560 MINPP1Q9UNW1 487 aa16.07■□□□□ 0.16
HDAC8-204ENST00000373560 ADGRA2Q96PE1 1338 aa16.07■□□□□ 0.16
HDAC8-204ENST00000373560 MYH3P11055 1940 aa16.07■□□□□ 0.16
HDAC8-204ENST00000373560 IRS2Q9Y4H2 1338 aa16.06■□□□□ 0.16
HDAC8-204ENST00000373560 GNRH1P01148 92 aa16.06■□□□□ 0.16
HDAC8-204ENST00000373560 CCT4P50991 539 aaKnown RBP16.06■□□□□ 0.16
HDAC8-204ENST00000373560 CCDC152Q4G0S7 254 aa16.06■□□□□ 0.16
HDAC8-204ENST00000373560 MTMR14Q8NCE2 650 aa16.06■□□□□ 0.16
HDAC8-204ENST00000373560 PAWRQ96IZ0 340 aaKnown RBP16.06■□□□□ 0.16
HDAC8-204ENST00000373560 CDH23Q9H251 3354 aa16.06■□□□□ 0.16
HDAC8-204ENST00000373560 TTC28Q96AY4 2481 aa16.05■□□□□ 0.16
HDAC8-204ENST00000373560 COL2A1P02458 1487 aaPredicted RBP16.05■□□□□ 0.16
HDAC8-204ENST00000373560 GABBR2O75899 941 aa16.05■□□□□ 0.16
HDAC8-204ENST00000373560 ZBTB38Q8NAP3 1195 aaPredicted RBP16.05■□□□□ 0.16
HDAC8-204ENST00000373560 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.05■□□□□ 0.16
HDAC8-204ENST00000373560 TEPSINQ96N21 525 aa16.05■□□□□ 0.16
HDAC8-204ENST00000373560 ELNP15502 786 aa16.04■□□□□ 0.16
HDAC8-204ENST00000373560 KIF12Q96FN5 646 aa16.04■□□□□ 0.16
HDAC8-204ENST00000373560 DEFB118Q96PH6 123 aa16.04■□□□□ 0.16
HDAC8-204ENST00000373560 SNCAIPQ9Y6H5 919 aa16.04■□□□□ 0.16
HDAC8-204ENST00000373560 FMNL1O95466 1100 aaPredicted RBP16.03■□□□□ 0.16
HDAC8-204ENST00000373560 PPP2R1AP30153 589 aa16.03■□□□□ 0.16
HDAC8-204ENST00000373560 PLA2G5P39877 138 aa16.03■□□□□ 0.16
HDAC8-204ENST00000373560 UBXN2AP68543 259 aa16.03■□□□□ 0.16
HDAC8-204ENST00000373560 JAG2Q9Y219 1238 aa16.03■□□□□ 0.16
HDAC8-204ENST00000373560 SPDYE5A6NIY4 337 aa16.02■□□□□ 0.16
HDAC8-204ENST00000373560 SNAP23O00161 211 aa16.02■□□□□ 0.16
HDAC8-204ENST00000373560 MAP3K13O43283 966 aa16.02■□□□□ 0.16
HDAC8-204ENST00000373560 PDE8AO60658 829 aa16.02■□□□□ 0.16
HDAC8-204ENST00000373560 TFRCP02786 760 aaKnown RBP16.02■□□□□ 0.16
HDAC8-204ENST00000373560 MMP14P50281 582 aa16.02■□□□□ 0.16
HDAC8-204ENST00000373560 TRIM28Q13263 835 aaKnown RBP16.02■□□□□ 0.16
HDAC8-204ENST00000373560 POTEB2H3BUK9 544 aa16.01■□□□□ 0.15
HDAC8-204ENST00000373560 INHAP05111 366 aa16.01■□□□□ 0.15
HDAC8-204ENST00000373560 UBE2OQ9C0C9 1292 aaKnown RBP16.01■□□□□ 0.15
HDAC8-204ENST00000373560 CRISPLD2Q9H0B8 497 aa16.01■□□□□ 0.15
HDAC8-204ENST00000373560 TIMELESSQ9UNS1 1208 aa16.01■□□□□ 0.15
HDAC8-204ENST00000373560 IRF6O14896 467 aa16■□□□□ 0.15
HDAC8-204ENST00000373560 CETPP11597 493 aa16■□□□□ 0.15
HDAC8-204ENST00000373560 MAP3K9P80192 1104 aa16■□□□□ 0.15
HDAC8-204ENST00000373560 SLAIN1Q8ND83 568 aa16■□□□□ 0.15
HDAC8-204ENST00000373560 TMEM39BQ9GZU3 492 aa16■□□□□ 0.15
HDAC8-204ENST00000373560 GREM2Q9H772 168 aa16■□□□□ 0.15
HDAC8-204ENST00000373560 PCCAP05165 728 aaPredicted RBP15.99■□□□□ 0.15
HDAC8-204ENST00000373560 CLCN6P51797 869 aa15.99■□□□□ 0.15
HDAC8-204ENST00000373560 MYD88Q99836 296 aa15.99■□□□□ 0.15
HDAC8-204ENST00000373560 CD209Q9NNX6 404 aa15.99■□□□□ 0.15
HDAC8-204ENST00000373560 ZCCHC17Q9NP64 241 aaKnown RBP15.99■□□□□ 0.15
HDAC8-204ENST00000373560 PAK6Q9NQU5 681 aaPredicted RBP15.99■□□□□ 0.15
HDAC8-204ENST00000373560 BSDC1Q9NW68 430 aaPredicted RBP15.99■□□□□ 0.15
HDAC8-204ENST00000373560 ZNF70Q9UC06 446 aaPredicted RBP15.99■□□□□ 0.15
HDAC8-204ENST00000373560 PCDHB13Q9Y5F0 798 aa15.99■□□□□ 0.15
HDAC8-204ENST00000373560 GALR2O43603 387 aaPredicted RBP15.98■□□□□ 0.15
HDAC8-204ENST00000373560 MYO1BO43795 1136 aa15.98■□□□□ 0.15
HDAC8-204ENST00000373560 CTSWP56202 376 aa15.98■□□□□ 0.15
HDAC8-204ENST00000373560 HDGFL1Q5TGJ6 251 aa15.98■□□□□ 0.15
HDAC8-204ENST00000373560 MAFAQ8NHW3 353 aaPredicted RBP15.98■□□□□ 0.15
HDAC8-204ENST00000373560 ZKSCAN4Q969J2 545 aaPredicted RBP15.98■□□□□ 0.15
HDAC8-204ENST00000373560 MS4A3Q96HJ5 214 aa15.98■□□□□ 0.15
HDAC8-204ENST00000373560 TDRD3Q9H7E2 651 aaKnown RBP15.98■□□□□ 0.15
HDAC8-204ENST00000373560 CSADQ9Y600 493 aa15.98■□□□□ 0.15
HDAC8-204ENST00000373560 TCP10L2B9ZVM9 353 aa15.97■□□□□ 0.15
HDAC8-204ENST00000373560 ADCY3O60266 1144 aa15.97■□□□□ 0.15
HDAC8-204ENST00000373560 NECAB2Q7Z6G3 386 aa15.97■□□□□ 0.15
HDAC8-204ENST00000373560 DOCK3Q8IZD9 2030 aa15.96■□□□□ 0.15
HDAC8-204ENST00000373560 PDHXO00330 501 aa15.96■□□□□ 0.15
HDAC8-204ENST00000373560 HOXD10P28358 340 aa15.96■□□□□ 0.15
HDAC8-204ENST00000373560 SNAPC2Q13487 334 aa15.96■□□□□ 0.15
HDAC8-204ENST00000373560 MOGSQ13724 837 aa15.96■□□□□ 0.15
HDAC8-204ENST00000373560 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.96■□□□□ 0.15
HDAC8-204ENST00000373560 CDC5LQ99459 802 aaKnown RBP15.96■□□□□ 0.15
HDAC8-204ENST00000373560 CDX2Q99626 313 aaPredicted RBP15.96■□□□□ 0.15
HDAC8-204ENST00000373560 WDHD1O75717 1129 aaPredicted RBP15.95■□□□□ 0.14
HDAC8-204ENST00000373560 BCRP11274 1271 aa15.95■□□□□ 0.14
HDAC8-204ENST00000373560 RBM5P52756 815 aaKnown RBP eCLIP15.95■□□□□ 0.14
HDAC8-204ENST00000373560 FAM109BQ6ICB4 259 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms