RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 KDM4AO75164 1064 aa12.12□□□□□ -0.47
PGK1-201ENST00000373316 PRIM1P49642 420 aaKnown RBP12.12□□□□□ -0.47
PGK1-201ENST00000373316 ERMNQ8TAM6 284 aa12.12□□□□□ -0.47
PGK1-201ENST00000373316 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.12□□□□□ -0.47
PGK1-201ENST00000373316 GCOM1H8Y6P7 765 aaPredicted RBP12.12□□□□□ -0.47
PGK1-201ENST00000373316 MYZAPP0CAP1 466 aa12.12□□□□□ -0.47
PGK1-201ENST00000373316 KRT83P78385 493 aa12.12□□□□□ -0.47
PGK1-201ENST00000373316 PIGBQ92521 554 aa12.12□□□□□ -0.47
PGK1-201ENST00000373316 KAT14Q9H8E8 782 aa12.12□□□□□ -0.47
PGK1-201ENST00000373316 ADCY9O60503 1353 aa12.12□□□□□ -0.47
PGK1-201ENST00000373316 IVLP07476 585 aa12.11□□□□□ -0.47
PGK1-201ENST00000373316 CARD10Q9BWT7 1032 aa12.11□□□□□ -0.47
PGK1-201ENST00000373316 GLT8D2Q9H1C3 349 aa12.11□□□□□ -0.47
PGK1-201ENST00000373316 KRT222Q8N1A0 295 aa12.11□□□□□ -0.47
PGK1-201ENST00000373316 PLBD2Q8NHP8 589 aa12.11□□□□□ -0.47
PGK1-201ENST00000373316 OSBPL3Q9H4L5 887 aa12.11□□□□□ -0.47
PGK1-201ENST00000373316 CPDO75976 1380 aa12.11□□□□□ -0.47
PGK1-201ENST00000373316 ELP1O95163 1332 aa12.11□□□□□ -0.47
PGK1-201ENST00000373316 CACNA2D4Q7Z3S7 1137 aa12.11□□□□□ -0.47
PGK1-201ENST00000373316 UBE3BQ7Z3V4 1068 aa12.11□□□□□ -0.47
PGK1-201ENST00000373316 TMC6Q7Z403 805 aa12.11□□□□□ -0.47
PGK1-201ENST00000373316 ANKRD2Q9GZV1 360 aa12.11□□□□□ -0.47
PGK1-201ENST00000373316 USP54Q70EL1 1684 aa12.11□□□□□ -0.47
PGK1-201ENST00000373316 RTN1Q16799 776 aa12.11□□□□□ -0.47
PGK1-201ENST00000373316 USP37Q86T82 979 aa12.11□□□□□ -0.47
PGK1-201ENST00000373316 V9GYY5 206 aaPredicted RBP12.11□□□□□ -0.47
PGK1-201ENST00000373316 NBPF26B4DH59 902 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 SPTLC2O15270 562 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 URI1O94763 535 aaPredicted RBP12.1□□□□□ -0.47
PGK1-201ENST00000373316 RPS6KB1P23443 525 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 RBM10P98175 930 aaKnown RBP12.1□□□□□ -0.47
PGK1-201ENST00000373316 TYRO3Q06418 890 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 NMIQ13287 307 aaPredicted RBP12.1□□□□□ -0.47
PGK1-201ENST00000373316 NBPF14Q5TI25 921 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 NBPF10Q6P3W6 841 aaKnown RBP12.1□□□□□ -0.47
PGK1-201ENST00000373316 NBPF15Q8N660 670 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 FAM208AQ9UK61 1670 aaKnown RBP12.1□□□□□ -0.47
PGK1-201ENST00000373316 GOLGA6L10A0A0M3HER8 536 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 KLF18A0A0U1RQI7 1052 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 TOM1O60784 492 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 ZNF76P36508 570 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 NUP88Q99567 741 aaPredicted RBP12.1□□□□□ -0.47
PGK1-201ENST00000373316 METTL22Q9BUU2 404 aaPredicted RBP12.1□□□□□ -0.47
PGK1-201ENST00000373316 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.1□□□□□ -0.47
PGK1-201ENST00000373316 SGSM2O43147 1006 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 AK2P54819 239 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 PARP10Q53GL7 1025 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 SYNE4Q8N205 404 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 BRF1Q92994 677 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 ALG1Q9BT22 464 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 GBP2P32456 591 aaPredicted RBP12.1□□□□□ -0.47
PGK1-201ENST00000373316 FAM160A1Q05DH4 1040 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 Q6ZUG5 572 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 DNAJC10Q8IXB1 793 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 PLVAPQ9BX97 442 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 TSGA10Q9BZW7 698 aa12.1□□□□□ -0.47
PGK1-201ENST00000373316 SLU7O95391 586 aaKnown RBP12.09□□□□□ -0.47
PGK1-201ENST00000373316 BEND3Q5T5X7 828 aa12.09□□□□□ -0.47
PGK1-201ENST00000373316 INCENPQ9NQS7 918 aa12.09□□□□□ -0.47
PGK1-201ENST00000373316 ATP10DQ9P241 1426 aa12.09□□□□□ -0.47
PGK1-201ENST00000373316 HSPA4P34932 840 aa12.09□□□□□ -0.47
PGK1-201ENST00000373316 HOOK3Q86VS8 718 aa12.09□□□□□ -0.47
PGK1-201ENST00000373316 HLA-DOAP06340 250 aa12.09□□□□□ -0.47
PGK1-201ENST00000373316 UBA7P41226 1012 aa12.09□□□□□ -0.47
PGK1-201ENST00000373316 UBASH3AP57075 661 aa12.09□□□□□ -0.47
PGK1-201ENST00000373316 LMBR1Q8WVP7 490 aa12.09□□□□□ -0.47
PGK1-201ENST00000373316 CCDC102AQ96A19 550 aa12.09□□□□□ -0.47
PGK1-201ENST00000373316 TTC12Q9H892 705 aaPredicted RBP12.09□□□□□ -0.47
PGK1-201ENST00000373316 ANO6Q4KMQ2 910 aa12.09□□□□□ -0.47
PGK1-201ENST00000373316 RILPL1Q5EBL4 403 aa12.09□□□□□ -0.47
PGK1-201ENST00000373316 DSCC1Q9BVC3 393 aa12.09□□□□□ -0.47
PGK1-201ENST00000373316 PSMA7O14818 248 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 CLUL1Q15846 466 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 CNPY2Q9Y2B0 182 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 LTBP4Q8N2S1 1624 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 CCDC175P0C221 793 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 SEPT7Q16181 437 aaKnown RBP12.08□□□□□ -0.48
PGK1-201ENST00000373316 CLSTN2Q9H4D0 955 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 STAP2Q9UGK3 403 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 IGKV5-2P06315 115 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 GSPT1P15170 499 aaKnown RBP12.08□□□□□ -0.48
PGK1-201ENST00000373316 GPTP24298 496 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 EPHA10Q5JZY3 1008 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 TTLL5Q6EMB2 1281 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.486e-17■□□□□ 9.5
PGK1-201ENST00000373316 ABCF2Q9UG63 623 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 OVOS2A0A0G2JMS6 1433 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 LRRC37A3O60309 1634 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 VIRMAQ69YN4 1812 aaKnown RBP12.08□□□□□ -0.48
PGK1-201ENST00000373316 TRIM75PA6NK02 468 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 HCLS1P14317 486 aaPredicted RBP12.08□□□□□ -0.48
PGK1-201ENST00000373316 EZRP15311 586 aaKnown RBP12.08□□□□□ -0.48
PGK1-201ENST00000373316 PPP4R3AQ6IN85 833 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 DDX46Q7L014 1031 aaKnown RBP12.08□□□□□ -0.48
PGK1-201ENST00000373316 CKAP2LQ8IYA6 745 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 SLC4A9Q96Q91 983 aa12.08□□□□□ -0.48
PGK1-201ENST00000373316 STMN4Q9H169 189 aaPredicted RBP12.08□□□□□ -0.48
PGK1-201ENST00000373316 CRYBG1Q9Y4K1 1723 aa12.07□□□□□ -0.48
PGK1-201ENST00000373316 HSPA1LP34931 641 aa12.07□□□□□ -0.48
PGK1-201ENST00000373316 CNGA4Q8IV77 575 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms