RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 C16orf71Q8IYS4 520 aaPredicted RBP7.5□□□□□ -1.21
CHD6-203ENST00000373233 PARP4Q9UKK3 1724 aaKnown RBP7.5□□□□□ -1.21
CHD6-203ENST00000373233 TTC41PQ6P2S7 1318 aa7.5□□□□□ -1.21
CHD6-203ENST00000373233 MCTP2Q6DN12 878 aa7.5□□□□□ -1.21
CHD6-203ENST00000373233 PRPF40BQ6NWY9 871 aaKnown RBP7.5□□□□□ -1.21
CHD6-203ENST00000373233 UBE4AQ14139 1066 aa7.5□□□□□ -1.21
CHD6-203ENST00000373233 MAP7Q14244 749 aa7.5□□□□□ -1.21
CHD6-203ENST00000373233 OVOS2A0A0G2JMS6 1433 aa7.5□□□□□ -1.21
CHD6-203ENST00000373233 SAFBQ15424 915 aaKnown RBP eCLIP7.5□□□□□ -1.213e-6■□□□□ 11
CHD6-203ENST00000373233 E2F4Q16254 413 aa7.5□□□□□ -1.21
CHD6-203ENST00000373233 VPS53Q5VIR6 699 aa7.5□□□□□ -1.21
CHD6-203ENST00000373233 LRSAM1Q6UWE0 723 aa7.5□□□□□ -1.21
CHD6-203ENST00000373233 PDRG1Q9NUG6 133 aa7.5□□□□□ -1.21
CHD6-203ENST00000373233 NFAT5O94916 1531 aa7.5□□□□□ -1.21
CHD6-203ENST00000373233 NEURL1BA8MQ27 555 aa7.5□□□□□ -1.21
CHD6-203ENST00000373233 FAM98CQ17RN3 349 aaKnown RBP7.5□□□□□ -1.21
CHD6-203ENST00000373233 GOLGA5Q8TBA6 731 aa7.5□□□□□ -1.21
CHD6-203ENST00000373233 GCOM1H8Y6P7 765 aaPredicted RBP7.49□□□□□ -1.21
CHD6-203ENST00000373233 DHX16O60231 1041 aaKnown RBP7.49□□□□□ -1.21
CHD6-203ENST00000373233 MYZAPP0CAP1 466 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 HCLS1P14317 486 aaPredicted RBP7.49□□□□□ -1.21
CHD6-203ENST00000373233 GCKRQ14397 625 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 IMMTQ16891 758 aaKnown RBP7.49□□□□□ -1.21
CHD6-203ENST00000373233 TMC6Q7Z403 805 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 TTC12Q9H892 705 aaPredicted RBP7.49□□□□□ -1.21
CHD6-203ENST00000373233 DACH1Q9UI36 760 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 PRIM1P49642 420 aaKnown RBP7.49□□□□□ -1.21
CHD6-203ENST00000373233 MXRA7P84157 204 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 SUCLG2Q96I99 432 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 ZSCAN31Q96LW9 406 aaPredicted RBP7.49□□□□□ -1.21
CHD6-203ENST00000373233 SCAND2PQ9GZW5 306 aaPredicted RBP7.49□□□□□ -1.21
CHD6-203ENST00000373233 CREB3O43889 395 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 TOP1P11387 765 aaKnown RBP7.49□□□□□ -1.21
CHD6-203ENST00000373233 OAS2P29728 719 aaKnown RBP7.49□□□□□ -1.21
CHD6-203ENST00000373233 GNG11P61952 73 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 CEP85LQ5SZL2 805 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 DZIP3Q86Y13 1208 aaKnown RBP7.49□□□□□ -1.21
CHD6-203ENST00000373233 ERO1AQ96HE7 468 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 ERBB4Q15303 1308 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 RIOK3O14730 519 aaKnown RBP7.49□□□□□ -1.21
CHD6-203ENST00000373233 MARCH6O60337 910 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 NOL3O60936 208 aaKnown RBP7.49□□□□□ -1.21
CHD6-203ENST00000373233 SSH2Q76I76 1423 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 ERCC3P19447 782 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 GBP1P32455 592 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 CCDC152Q4G0S7 254 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 USH1CQ9Y6N9 552 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 CCDC83Q8IWF9 413 aa7.49□□□□□ -1.21
CHD6-203ENST00000373233 C17orf53Q8N3J3 647 aaPredicted RBP7.49□□□□□ -1.21
CHD6-203ENST00000373233 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.49□□□□□ -1.212e-6■■■■■ 115.8
CHD6-203ENST00000373233 LRRC23Q53EV4 343 aaPredicted RBP7.49□□□□□ -1.21
CHD6-203ENST00000373233 PDE1CQ14123 709 aaPredicted RBP7.48□□□□□ -1.21
CHD6-203ENST00000373233 LMBR1LQ6UX01 489 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 MMS22LQ6ZRQ5 1243 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 BCL2L12Q9HB09 334 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 PHLPP1O60346 1717 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 PNMA6EA0A0J9YXQ4 647 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 ZEB2O60315 1214 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 RFC1P35251 1148 aaPredicted RBP7.48□□□□□ -1.21
CHD6-203ENST00000373233 ATP11AP98196 1134 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 SATB1Q01826 763 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 ALS2CR12Q96Q35 445 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 VCXQ9H320 206 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 SH2B1Q9NRF2 756 aaPredicted RBP7.48□□□□□ -1.21
CHD6-203ENST00000373233 IFIT1P09914 478 aaKnown RBP7.48□□□□□ -1.21
CHD6-203ENST00000373233 TFCP2Q12800 502 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 KRT32Q14532 448 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 BEND3Q5T5X7 828 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 CKAP2LQ8IYA6 745 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 IL15P40933 162 aaPredicted RBP7.48□□□□□ -1.21
CHD6-203ENST00000373233 INF2Q27J81 1249 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 CEP120Q8N960 986 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 CCDC87Q9NVE4 849 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 USP21Q9UK80 565 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 PRAMEF22A3QJZ6 481 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 CYP27B1O15528 508 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 KLHL10Q6JEL2 608 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 RNF216Q9NWF9 866 aaPredicted RBP7.48□□□□□ -1.21
CHD6-203ENST00000373233 CTNNA3Q9UI47 895 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 DNAJC10Q8IXB1 793 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 PPP1R12CQ9BZL4 782 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 GON4LQ3T8J9 2241 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 DESP17661 470 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 DDX46Q7L014 1031 aaKnown RBP7.48□□□□□ -1.21
CHD6-203ENST00000373233 CDC5LQ99459 802 aaKnown RBP7.48□□□□□ -1.21
CHD6-203ENST00000373233 SLC8A1P32418 973 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 NCAPGQ9BPX3 1015 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 ESYT1Q9BSJ8 1104 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 USP44Q9H0E7 712 aa7.48□□□□□ -1.21
CHD6-203ENST00000373233 A1BGP04217 495 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 NACAP1Q9BZK3 213 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 IDH1O75874 414 aaKnown RBP7.47□□□□□ -1.21
CHD6-203ENST00000373233 EHBP1Q8NDI1 1231 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 WHAMMQ8TF30 809 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 TSC1Q92574 1164 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 IFT74Q96LB3 600 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 TACC1O75410 805 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 SEC24BO95487 1268 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 NBPF7P0C2Y1 421 aaPredicted RBP7.47□□□□□ -1.21
CHD6-203ENST00000373233 RAB3GAP1Q15042 981 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms