RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 C15orf52Q6ZUT6 534 aaKnown RBP13.11□□□□□ -0.31
CLRN3-201ENST00000368671 ZBED3Q96IU2 234 aaPredicted RBP13.11□□□□□ -0.31
CLRN3-201ENST00000368671 CNNM1Q9NRU3 951 aa13.11□□□□□ -0.31
CLRN3-201ENST00000368671 C9orf78Q9NZ63 289 aaPredicted RBP13.11□□□□□ -0.31
CLRN3-201ENST00000368671 PCDHAC2Q9Y5I4 1007 aa13.11□□□□□ -0.31
CLRN3-201ENST00000368671 CLRN2A0PK11 232 aa13.1□□□□□ -0.31
CLRN3-201ENST00000368671 ZNF316A6NFI3 1004 aaPredicted RBP13.1□□□□□ -0.31
CLRN3-201ENST00000368671 IL1R1P14778 569 aa13.1□□□□□ -0.31
CLRN3-201ENST00000368671 CFAP100Q494V2 611 aa13.1□□□□□ -0.31
CLRN3-201ENST00000368671 COLQQ9Y215 455 aaPredicted RBP13.1□□□□□ -0.31
CLRN3-201ENST00000368671 MYO1BO43795 1136 aa13.09□□□□□ -0.31
CLRN3-201ENST00000368671 TM4SF4P48230 202 aa13.09□□□□□ -0.31
CLRN3-201ENST00000368671 RBM5P52756 815 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLRN3-201ENST00000368671 SREBF2Q12772 1141 aa13.09□□□□□ -0.31
CLRN3-201ENST00000368671 ZNF296Q8WUU4 475 aaPredicted RBP13.09□□□□□ -0.31
CLRN3-201ENST00000368671 ARAP2Q8WZ64 1704 aa13.09□□□□□ -0.31
CLRN3-201ENST00000368671 DEFB129Q9H1M3 183 aa13.09□□□□□ -0.31
CLRN3-201ENST00000368671 VEZTQ9HBM0 779 aa13.09□□□□□ -0.31
CLRN3-201ENST00000368671 SSC5DA1L4H1 1573 aa13.08□□□□□ -0.32
CLRN3-201ENST00000368671 ALDH1L1O75891 902 aa13.08□□□□□ -0.32
CLRN3-201ENST00000368671 FKBP1AP62942 108 aaKnown RBP13.08□□□□□ -0.32
CLRN3-201ENST00000368671 LDLRAD1Q5T700 205 aa13.08□□□□□ -0.32
CLRN3-201ENST00000368671 MTMR14Q8NCE2 650 aa13.08□□□□□ -0.32
CLRN3-201ENST00000368671 SUCLG2Q96I99 432 aa13.08□□□□□ -0.32
CLRN3-201ENST00000368671 PRMT6Q96LA8 375 aaPredicted RBP13.08□□□□□ -0.32
CLRN3-201ENST00000368671 SRCIN1Q9C0H9 1055 aa13.08□□□□□ -0.32
CLRN3-201ENST00000368671 GPR25O00155 361 aa13.07□□□□□ -0.32
CLRN3-201ENST00000368671 ZEB1P37275 1124 aaPredicted RBP13.07□□□□□ -0.32
CLRN3-201ENST00000368671 GYG1P46976 350 aa13.07□□□□□ -0.32
CLRN3-201ENST00000368671 SPRYD7Q5W111 196 aa13.07□□□□□ -0.32
CLRN3-201ENST00000368671 LHX8Q68G74 356 aa13.07□□□□□ -0.32
CLRN3-201ENST00000368671 HPS5Q9UPZ3 1129 aa13.07□□□□□ -0.32
CLRN3-201ENST00000368671 PPP2R3BQ9Y5P8 575 aa13.07□□□□□ -0.32
CLRN3-201ENST00000368671 AOX1Q06278 1338 aa13.07□□□□□ -0.32
CLRN3-201ENST00000368671 POTEB2H3BUK9 544 aa13.06□□□□□ -0.32
CLRN3-201ENST00000368671 STK25O00506 426 aa13.06□□□□□ -0.32
CLRN3-201ENST00000368671 PPP1R12BO60237 982 aaPredicted RBP13.06□□□□□ -0.32
CLRN3-201ENST00000368671 SLC10A4Q96EP9 437 aa13.06□□□□□ -0.32
CLRN3-201ENST00000368671 PUS3Q9BZE2 481 aaKnown RBP13.06□□□□□ -0.32
CLRN3-201ENST00000368671 LAMB1P07942 1786 aa13.06□□□□□ -0.32
CLRN3-201ENST00000368671 FKTNO75072 461 aa13.05□□□□□ -0.32
CLRN3-201ENST00000368671 NBPF7P0C2Y1 421 aaPredicted RBP13.05□□□□□ -0.32
CLRN3-201ENST00000368671 HIBADHP31937 336 aaKnown RBP13.05□□□□□ -0.32
CLRN3-201ENST00000368671 UBE4AQ14139 1066 aa13.05□□□□□ -0.32
CLRN3-201ENST00000368671 PKN2Q16513 984 aaKnown RBP13.05□□□□□ -0.32
CLRN3-201ENST00000368671 MAP3K11Q16584 847 aa13.05□□□□□ -0.32
CLRN3-201ENST00000368671 SUPT20HL1Q3ZLR7 823 aa13.05□□□□□ -0.32
CLRN3-201ENST00000368671 MFSD14BQ5SR56 506 aa13.05□□□□□ -0.32
CLRN3-201ENST00000368671 NBPF12Q5TAG4 269 aaPredicted RBP13.05□□□□□ -0.32
CLRN3-201ENST00000368671 TDRD7Q8NHU6 1098 aaKnown RBP13.05□□□□□ -0.32
CLRN3-201ENST00000368671 KAZALD1Q96I82 304 aa13.05□□□□□ -0.32
CLRN3-201ENST00000368671 WNK4Q96J92 1243 aa13.05□□□□□ -0.32
CLRN3-201ENST00000368671 CLMNQ96JQ2 1002 aa13.05□□□□□ -0.32
CLRN3-201ENST00000368671 R3HDMLQ9H3Y0 253 aa13.05□□□□□ -0.32
CLRN3-201ENST00000368671 TTF2Q9UNY4 1162 aaKnown RBP13.05□□□□□ -0.32
CLRN3-201ENST00000368671 FAM205AQ6ZU69 1335 aa13.05□□□□□ -0.32
CLRN3-201ENST00000368671 OTOFQ9HC10 1997 aa13.05□□□□□ -0.32
CLRN3-201ENST00000368671 MANSC4A6NHS7 340 aaPredicted RBP13.04□□□□□ -0.32
CLRN3-201ENST00000368671 SEC24BO95487 1268 aa13.04□□□□□ -0.32
CLRN3-201ENST00000368671 RASA3Q14644 834 aa13.04□□□□□ -0.32
CLRN3-201ENST00000368671 OCEL1Q9H607 264 aa13.04□□□□□ -0.32
CLRN3-201ENST00000368671 BICC1Q9H694 974 aaKnown RBP13.04□□□□□ -0.32
CLRN3-201ENST00000368671 ALDH1A1P00352 501 aa13.03□□□□□ -0.32
CLRN3-201ENST00000368671 ZBTB48P10074 688 aaPredicted RBP13.03□□□□□ -0.32
CLRN3-201ENST00000368671 PLCG2P16885 1265 aa13.03□□□□□ -0.32
CLRN3-201ENST00000368671 IREB2P48200 963 aaKnown RBP13.03□□□□□ -0.32
CLRN3-201ENST00000368671 NOM1Q5C9Z4 860 aaKnown RBP13.03□□□□□ -0.32
CLRN3-201ENST00000368671 HS6ST3Q8IZP7 471 aa13.03□□□□□ -0.32
CLRN3-201ENST00000368671 MRPL50Q8N5N7 158 aaKnown RBP13.03□□□□□ -0.32
CLRN3-201ENST00000368671 EFCAB3Q8N7B9 438 aa13.03□□□□□ -0.32
CLRN3-201ENST00000368671 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
CLRN3-201ENST00000368671 FAM84BQ96KN1 310 aaPredicted RBP13.03□□□□□ -0.32
CLRN3-201ENST00000368671 CFHR5Q9BXR6 569 aa13.03□□□□□ -0.32
CLRN3-201ENST00000368671 TDRD3Q9H7E2 651 aaKnown RBP13.03□□□□□ -0.32
CLRN3-201ENST00000368671 ZNF70Q9UC06 446 aaPredicted RBP13.03□□□□□ -0.32
CLRN3-201ENST00000368671 IQSEC3Q9UPP2 1182 aaPredicted RBP13.03□□□□□ -0.32
CLRN3-201ENST00000368671 STK24Q9Y6E0 443 aa13.03□□□□□ -0.32
CLRN3-201ENST00000368671 MROH5Q6ZUA9 1318 aa13.03□□□□□ -0.32
CLRN3-201ENST00000368671 USP2O75604 605 aaPredicted RBP13.02□□□□□ -0.33
CLRN3-201ENST00000368671 SLC34A2O95436 690 aa13.02□□□□□ -0.33
CLRN3-201ENST00000368671 INHBEP58166 350 aa13.02□□□□□ -0.33
CLRN3-201ENST00000368671 CHAF1AQ13111 956 aaPredicted RBP13.02□□□□□ -0.33
CLRN3-201ENST00000368671 LRRC24Q50LG9 513 aa13.02□□□□□ -0.33
CLRN3-201ENST00000368671 METTL24Q5JXM2 366 aa13.02□□□□□ -0.33
CLRN3-201ENST00000368671 FBXO46Q6PJ61 603 aaPredicted RBP13.02□□□□□ -0.33
CLRN3-201ENST00000368671 VPS37DQ86XT2 251 aa13.02□□□□□ -0.33
CLRN3-201ENST00000368671 RIPOR2Q9Y4F9 1068 aa13.02□□□□□ -0.33
CLRN3-201ENST00000368671 UTYO14607 1347 aa13.02□□□□□ -0.33
CLRN3-201ENST00000368671 TCP10L2B9ZVM9 353 aa13.01□□□□□ -0.33
CLRN3-201ENST00000368671 IGF2BP3O00425 579 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLRN3-201ENST00000368671 FRAT2O75474 233 aaPredicted RBP13.01□□□□□ -0.33
CLRN3-201ENST00000368671 GJA5P36382 358 aa13.01□□□□□ -0.33
CLRN3-201ENST00000368671 CRKP46108 304 aa13.01□□□□□ -0.33
CLRN3-201ENST00000368671 TNFAIP1Q13829 316 aa13.01□□□□□ -0.33
CLRN3-201ENST00000368671 RABL6Q3YEC7 729 aaPredicted RBP13.01□□□□□ -0.33
CLRN3-201ENST00000368671 ANKRD13AQ8IZ07 590 aa13.01□□□□□ -0.33
CLRN3-201ENST00000368671 ANKRD44Q8N8A2 993 aa13.01□□□□□ -0.33
CLRN3-201ENST00000368671 ELP3Q9H9T3 547 aa13.01□□□□□ -0.33
CLRN3-201ENST00000368671 SERPINA10Q9UK55 444 aa13.01□□□□□ -0.33
CLRN3-201ENST00000368671 ZNF521Q96K83 1311 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms