RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 COL13A1Q5TAT6 717 aaPredicted RBP19.92■□□□□ 0.78
RAB5C-201ENST00000346213 XAGE2Q96GT9 111 aa19.92■□□□□ 0.78
RAB5C-201ENST00000346213 MVPQ14764 893 aaKnown RBP19.91■□□□□ 0.78
RAB5C-201ENST00000346213 SERPINA10Q9UK55 444 aa19.91■□□□□ 0.78
RAB5C-201ENST00000346213 HDAC5Q9UQL6 1122 aa19.91■□□□□ 0.78
RAB5C-201ENST00000346213 DIXDC1Q155Q3 683 aa19.91■□□□□ 0.78
RAB5C-201ENST00000346213 SPDYE2Q495Y8 402 aa19.91■□□□□ 0.78
RAB5C-201ENST00000346213 ZNF384Q8TF68 577 aa19.91■□□□□ 0.78
RAB5C-201ENST00000346213 HHIPL1Q96JK4 782 aa19.91■□□□□ 0.78
RAB5C-201ENST00000346213 DEFB129Q9H1M3 183 aa19.91■□□□□ 0.78
RAB5C-201ENST00000346213 TLR7Q9NYK1 1049 aaKnown RBP19.91■□□□□ 0.78
RAB5C-201ENST00000346213 ZNF70Q9UC06 446 aaPredicted RBP19.91■□□□□ 0.78
RAB5C-201ENST00000346213 MYH13Q9UKX3 1938 aa19.9■□□□□ 0.78
RAB5C-201ENST00000346213 UBE2Q2LH0YL09 131 aa19.9■□□□□ 0.78
RAB5C-201ENST00000346213 APOBEC3HQ6NTF7 200 aaKnown RBP19.9■□□□□ 0.78
RAB5C-201ENST00000346213 FRAT2O75474 233 aaPredicted RBP19.89■□□□□ 0.77
RAB5C-201ENST00000346213 RBM5P52756 815 aaKnown RBP eCLIP19.89■□□□□ 0.77
RAB5C-201ENST00000346213 PRKG1Q13976 671 aa19.89■□□□□ 0.77
RAB5C-201ENST00000346213 VEZTQ9HBM0 779 aa19.89■□□□□ 0.77
RAB5C-201ENST00000346213 ZBTB40Q9NUA8 1239 aa19.89■□□□□ 0.77
RAB5C-201ENST00000346213 MMP14P50281 582 aa19.88■□□□□ 0.77
RAB5C-201ENST00000346213 NBPF12Q5TAG4 269 aaPredicted RBP19.88■□□□□ 0.77
RAB5C-201ENST00000346213 APOBEC3FQ8IUX4 373 aaKnown RBP19.88■□□□□ 0.77
RAB5C-201ENST00000346213 TEPSINQ96N21 525 aa19.88■□□□□ 0.77
RAB5C-201ENST00000346213 NOP58Q9Y2X3 529 aaKnown RBP19.88■□□□□ 0.77
RAB5C-201ENST00000346213 RGMBQ6NW40 437 aa19.87■□□□□ 0.77
RAB5C-201ENST00000346213 RASAL3Q86YV0 1011 aa19.87■□□□□ 0.77
RAB5C-201ENST00000346213 C2orf69Q8N8R5 385 aa19.87■□□□□ 0.77
RAB5C-201ENST00000346213 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.87■□□□□ 0.77
RAB5C-201ENST00000346213 SLC10A3P09131 477 aa19.87■□□□□ 0.77
RAB5C-201ENST00000346213 RASA3Q14644 834 aa19.87■□□□□ 0.77
RAB5C-201ENST00000346213 TBC1D22AQ8WUA7 517 aa19.87■□□□□ 0.77
RAB5C-201ENST00000346213 DBNDD2Q9BQY9 259 aa19.87■□□□□ 0.77
RAB5C-201ENST00000346213 TSKSQ9UJT2 592 aa19.87■□□□□ 0.77
RAB5C-201ENST00000346213 EXOC6BQ9Y2D4 811 aa19.87■□□□□ 0.77
RAB5C-201ENST00000346213 TCP10L2B9ZVM9 353 aa19.86■□□□□ 0.77
RAB5C-201ENST00000346213 SURF6O75683 361 aaKnown RBP19.86■□□□□ 0.77
RAB5C-201ENST00000346213 TNNI3KQ59H18 835 aa19.86■□□□□ 0.77
RAB5C-201ENST00000346213 TMEM39BQ9GZU3 492 aa19.86■□□□□ 0.77
RAB5C-201ENST00000346213 HMG20BQ9P0W2 317 aa19.86■□□□□ 0.77
RAB5C-201ENST00000346213 DAGLAQ9Y4D2 1042 aa19.86■□□□□ 0.77
RAB5C-201ENST00000346213 FPGT-TNNI3KV9GXZ4 949 aa19.86■□□□□ 0.77
RAB5C-201ENST00000346213 SALL1Q9NSC2 1324 aa19.86■□□□□ 0.77
RAB5C-201ENST00000346213 ZBTB22O15209 634 aa19.85■□□□□ 0.77
RAB5C-201ENST00000346213 MCAMP43121 646 aa19.85■□□□□ 0.77
RAB5C-201ENST00000346213 G3BP1Q13283 466 aaKnown RBP eCLIP19.85■□□□□ 0.773e-6■■□□□ 13.8
RAB5C-201ENST00000346213 ZDHHC15Q96MV8 337 aa19.85■□□□□ 0.77
RAB5C-201ENST00000346213 NEUROD6Q96NK8 337 aa19.85■□□□□ 0.77
RAB5C-201ENST00000346213 HSPA8P11142 646 aaKnown RBP19.84■□□□□ 0.77
RAB5C-201ENST00000346213 ECE1P42892 770 aa19.84■□□□□ 0.77
RAB5C-201ENST00000346213 B4GALNT3Q6L9W6 998 aa19.84■□□□□ 0.77
RAB5C-201ENST00000346213 WDR66Q8TBY9 1149 aa19.84■□□□□ 0.77
RAB5C-201ENST00000346213 EAF2Q96CJ1 260 aaPredicted RBP19.84■□□□□ 0.77
RAB5C-201ENST00000346213 ARID4AP29374 1257 aaPredicted RBP19.84■□□□□ 0.77
RAB5C-201ENST00000346213 ZNF157P51786 506 aaPredicted RBP19.84■□□□□ 0.77
RAB5C-201ENST00000346213 HDLBPQ00341 1268 aaKnown RBP19.84■□□□□ 0.77
RAB5C-201ENST00000346213 TBC1D9Q6ZT07 1266 aa19.84■□□□□ 0.77
RAB5C-201ENST00000346213 EXOC6Q8TAG9 804 aa19.84■□□□□ 0.77
RAB5C-201ENST00000346213 TEKT1Q969V4 418 aa19.84■□□□□ 0.77
RAB5C-201ENST00000346213 CLMNQ96JQ2 1002 aa19.84■□□□□ 0.77
RAB5C-201ENST00000346213 DBNLQ9UJU6 430 aaKnown RBP19.84■□□□□ 0.77
RAB5C-201ENST00000346213 LDLRAD1Q5T700 205 aa19.83■□□□□ 0.76
RAB5C-201ENST00000346213 DENND2AQ9ULE3 1009 aa19.83■□□□□ 0.76
RAB5C-201ENST00000346213 AKAP2Q9Y2D5 859 aa19.83■□□□□ 0.76
RAB5C-201ENST00000346213 OTOFQ9HC10 1997 aa19.83■□□□□ 0.76
RAB5C-201ENST00000346213 SEMA3EO15041 775 aa19.82■□□□□ 0.76
RAB5C-201ENST00000346213 KIF23Q02241 960 aaPredicted RBP19.82■□□□□ 0.76
RAB5C-201ENST00000346213 NFIAQ12857 509 aa19.82■□□□□ 0.76
RAB5C-201ENST00000346213 SUGT1Q9Y2Z0 365 aa19.82■□□□□ 0.76
RAB5C-201ENST00000346213 RFX7Q2KHR2 1363 aa19.82■□□□□ 0.76
RAB5C-201ENST00000346213 MAP2K2P36507 400 aa19.81■□□□□ 0.76
RAB5C-201ENST00000346213 LBX1P52954 281 aa19.81■□□□□ 0.76
RAB5C-201ENST00000346213 FKBP1BP68106 108 aa19.81■□□□□ 0.76
RAB5C-201ENST00000346213 HHIPL2Q6UWX4 724 aa19.81■□□□□ 0.76
RAB5C-201ENST00000346213 CCDC8Q9H0W5 538 aaPredicted RBP19.81■□□□□ 0.76
RAB5C-201ENST00000346213 PDS5AQ29RF7 1337 aaKnown RBP19.81■□□□□ 0.76
RAB5C-201ENST00000346213 SLURP2P0DP57 97 aa19.81■□□□□ 0.76
RAB5C-201ENST00000346213 MKRN3Q13064 507 aaKnown RBP19.81■□□□□ 0.76
RAB5C-201ENST00000346213 CDC42EP5Q6NZY7 148 aa19.81■□□□□ 0.76
RAB5C-201ENST00000346213 ZFPM1Q8IX07 1006 aa19.81■□□□□ 0.76
RAB5C-201ENST00000346213 MRIQ9BWK5 157 aa19.81■□□□□ 0.76
RAB5C-201ENST00000346213 GPR108Q9NPR9 543 aa19.81■□□□□ 0.76
RAB5C-201ENST00000346213 SNRKQ9NRH2 765 aa19.81■□□□□ 0.76
RAB5C-201ENST00000346213 DDX19BQ9UMR2 479 aa19.81■□□□□ 0.76
RAB5C-201ENST00000346213 ANGEL1Q9UNK9 670 aaKnown RBP19.81■□□□□ 0.76
RAB5C-201ENST00000346213 NDUFB9Q9Y6M9 179 aa19.81■□□□□ 0.76
RAB5C-201ENST00000346213 GAKO14976 1311 aa19.8■□□□□ 0.76
RAB5C-201ENST00000346213 MYO1BO43795 1136 aa19.8■□□□□ 0.76
RAB5C-201ENST00000346213 USP2O75604 605 aaPredicted RBP19.8■□□□□ 0.76
RAB5C-201ENST00000346213 LDHBP07195 334 aaKnown RBP19.8■□□□□ 0.76
RAB5C-201ENST00000346213 GJA5P36382 358 aa19.8■□□□□ 0.76
RAB5C-201ENST00000346213 CCDC136Q96JN2 1154 aa19.8■□□□□ 0.76
RAB5C-201ENST00000346213 GNL3LQ9NVN8 582 aaKnown RBP19.8■□□□□ 0.76
RAB5C-201ENST00000346213 FAM198AQ9UFP1 575 aa19.8■□□□□ 0.76
RAB5C-201ENST00000346213 AKAP11Q9UKA4 1901 aa19.8■□□□□ 0.76
RAB5C-201ENST00000346213 PPP2R3BQ9Y5P8 575 aa19.8■□□□□ 0.76
RAB5C-201ENST00000346213 NOGQ13253 232 aa19.79■□□□□ 0.76
RAB5C-201ENST00000346213 TTLL12Q14166 644 aaPredicted RBP19.79■□□□□ 0.76
RAB5C-201ENST00000346213 PDE3AQ14432 1141 aa19.79■□□□□ 0.76
RAB5C-201ENST00000346213 MAP3K11Q16584 847 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms