RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 HELLSQ9NRZ9 838 aa20.58■□□□□ 0.89
VHL-202ENST00000345392 PHRF1Q9P1Y6 1649 aaKnown RBP20.58■□□□□ 0.89
VHL-202ENST00000345392 KCNJ6P48051 423 aa20.58■□□□□ 0.88
VHL-202ENST00000345392 UBASH3AP57075 661 aa20.58■□□□□ 0.88
VHL-202ENST00000345392 POLR3EQ9NVU0 708 aa20.58■□□□□ 0.88
VHL-202ENST00000345392 OVOS2A0A0G2JMS6 1433 aa20.57■□□□□ 0.88
VHL-202ENST00000345392 CYP27B1O15528 508 aa20.57■□□□□ 0.88
VHL-202ENST00000345392 SERPINC1P01008 464 aa20.57■□□□□ 0.88
VHL-202ENST00000345392 ZMYM1Q5SVZ6 1142 aa20.57■□□□□ 0.88
VHL-202ENST00000345392 SYNE3Q6ZMZ3 975 aa20.57■□□□□ 0.88
VHL-202ENST00000345392 ABCC6O95255 1503 aa20.57■□□□□ 0.88
VHL-202ENST00000345392 WDHD1O75717 1129 aaPredicted RBP20.57■□□□□ 0.88
VHL-202ENST00000345392 CFAP100Q494V2 611 aa20.57■□□□□ 0.88
VHL-202ENST00000345392 ZCCHC17Q9NP64 241 aaKnown RBP20.57■□□□□ 0.88
VHL-202ENST00000345392 ARGLU1Q9NWB6 273 aaPredicted RBP20.57■□□□□ 0.88
VHL-202ENST00000345392 MAST3O60307 1309 aa20.57■□□□□ 0.88
VHL-202ENST00000345392 YEATS4O95619 227 aa20.56■□□□□ 0.88
VHL-202ENST00000345392 AXDND1Q5T1B0 1012 aaPredicted RBP20.56■□□□□ 0.88
VHL-202ENST00000345392 FBXO18Q8NFZ0 1043 aa20.56■□□□□ 0.88
VHL-202ENST00000345392 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.56■□□□□ 0.88
VHL-202ENST00000345392 MROH7-TTC4A0A0A0MT08 1334 aa20.56■□□□□ 0.88
VHL-202ENST00000345392 PHLPP2Q6ZVD8 1323 aa20.56■□□□□ 0.88
VHL-202ENST00000345392 TMEM232C9JQI7 657 aa20.56■□□□□ 0.88
VHL-202ENST00000345392 CDK11BP21127 795 aaKnown RBP20.56■□□□□ 0.88
VHL-202ENST00000345392 RABL6Q3YEC7 729 aaPredicted RBP20.56■□□□□ 0.88
VHL-202ENST00000345392 HSP90AA4PQ58FG1 418 aa20.56■□□□□ 0.88
VHL-202ENST00000345392 REXO1L1PQ8IX06 675 aa20.56■□□□□ 0.88
VHL-202ENST00000345392 M0R2C6 588 aa20.55■□□□□ 0.88
VHL-202ENST00000345392 TADA3O75528 432 aa20.55■□□□□ 0.88
VHL-202ENST00000345392 SNRPA1P09661 255 aaKnown RBP20.55■□□□□ 0.88
VHL-202ENST00000345392 NEK11Q8NG66 645 aa20.55■□□□□ 0.88
VHL-202ENST00000345392 ZNF594Q96JF6 807 aaPredicted RBP20.55■□□□□ 0.88
VHL-202ENST00000345392 MAPK8IP2Q13387 824 aaPredicted RBP20.55■□□□□ 0.88
VHL-202ENST00000345392 ANO1Q5XXA6 986 aa20.55■□□□□ 0.88
VHL-202ENST00000345392 PARP3Q9Y6F1 533 aa20.55■□□□□ 0.88
VHL-202ENST00000345392 KLF18A0A0U1RQI7 1052 aa20.54■□□□□ 0.88
VHL-202ENST00000345392 XIRP1Q702N8 1843 aaKnown RBP20.54■□□□□ 0.88
VHL-202ENST00000345392 TUBB4AP04350 444 aa20.54■□□□□ 0.88
VHL-202ENST00000345392 EVCP57679 992 aa20.54■□□□□ 0.88
VHL-202ENST00000345392 IFNL2Q8IZJ0 200 aa20.54■□□□□ 0.88
VHL-202ENST00000345392 PALLDQ8WX93 1383 aa20.53■□□□□ 0.88
VHL-202ENST00000345392 GOLGA8BA8MQT2 603 aa20.53■□□□□ 0.88
VHL-202ENST00000345392 SASH3O75995 380 aa20.53■□□□□ 0.88
VHL-202ENST00000345392 CAPN2P17655 700 aa20.53■□□□□ 0.88
VHL-202ENST00000345392 CMA1P23946 247 aa20.53■□□□□ 0.88
VHL-202ENST00000345392 FAM193AP78312 1265 aa20.53■□□□□ 0.88
VHL-202ENST00000345392 PNOCQ13519 176 aa20.53■□□□□ 0.88
VHL-202ENST00000345392 IKBKBO14920 756 aa20.53■□□□□ 0.88
VHL-202ENST00000345392 ST5P78524 1137 aa20.53■□□□□ 0.88
VHL-202ENST00000345392 TTLL7Q6ZT98 887 aa20.53■□□□□ 0.88
VHL-202ENST00000345392 OSBP2Q969R2 916 aa20.53■□□□□ 0.88
VHL-202ENST00000345392 CPLX1O14810 134 aa20.52■□□□□ 0.88
VHL-202ENST00000345392 CCP110O43303 1012 aa20.52■□□□□ 0.88
VHL-202ENST00000345392 SYKP43405 635 aa20.52■□□□□ 0.88
VHL-202ENST00000345392 CCDC34Q96HJ3 373 aa20.52■□□□□ 0.88
VHL-202ENST00000345392 AIFM3Q96NN9 605 aa20.52■□□□□ 0.88
VHL-202ENST00000345392 HPS5Q9UPZ3 1129 aa20.52■□□□□ 0.88
VHL-202ENST00000345392 VWA3AA6NCI4 1184 aa20.52■□□□□ 0.88
VHL-202ENST00000345392 RNF113AO15541 343 aaKnown RBP20.52■□□□□ 0.88
VHL-202ENST00000345392 LRRFIP1Q32MZ4 808 aaKnown RBP20.52■□□□□ 0.88
VHL-202ENST00000345392 ATG9AQ7Z3C6 839 aa20.52■□□□□ 0.88
VHL-202ENST00000345392 CREBRFQ8IUR6 639 aa20.52■□□□□ 0.88
VHL-202ENST00000345392 EFCAB8A8MWE9 144 aa20.51■□□□□ 0.87
VHL-202ENST00000345392 IFIT1P09914 478 aaKnown RBP20.51■□□□□ 0.87
VHL-202ENST00000345392 TOP1P11387 765 aaKnown RBP20.51■□□□□ 0.87
VHL-202ENST00000345392 KIF23Q02241 960 aaPredicted RBP20.51■□□□□ 0.87
VHL-202ENST00000345392 GNL2Q13823 731 aaKnown RBP20.51■□□□□ 0.87
VHL-202ENST00000345392 LRRC24Q50LG9 513 aa20.51■□□□□ 0.87
VHL-202ENST00000345392 HSP90AB3PQ58FF7 597 aa20.51■□□□□ 0.87
VHL-202ENST00000345392 CCDC85AQ96PX6 553 aaPredicted RBP20.51■□□□□ 0.87
VHL-202ENST00000345392 FANCLQ9NW38 375 aa20.51■□□□□ 0.87
VHL-202ENST00000345392 AFDNP55196 1824 aaKnown RBP20.51■□□□□ 0.87
VHL-202ENST00000345392 PRC1O43663 620 aa20.51■□□□□ 0.87
VHL-202ENST00000345392 CABP4P57796 275 aa20.51■□□□□ 0.87
VHL-202ENST00000345392 MYL5Q02045 173 aa20.51■□□□□ 0.87
VHL-202ENST00000345392 FKBP4Q02790 459 aaKnown RBP eCLIP20.51■□□□□ 0.87
VHL-202ENST00000345392 BRAPQ7Z569 592 aa20.51■□□□□ 0.87
VHL-202ENST00000345392 WDR24Q96S15 920 aa20.51■□□□□ 0.87
VHL-202ENST00000345392 ZBTB3Q9H5J0 574 aa20.51■□□□□ 0.87
VHL-202ENST00000345392 DHX8Q14562 1220 aaKnown RBP20.5■□□□□ 0.87
VHL-202ENST00000345392 TEX35Q5T0J7 233 aa20.5■□□□□ 0.87
VHL-202ENST00000345392 VSTM4Q8IW00 320 aa20.5■□□□□ 0.87
VHL-202ENST00000345392 PPP2R2CQ9Y2T4 447 aa20.5■□□□□ 0.87
VHL-202ENST00000345392 NBPF26B4DH59 902 aa20.5■□□□□ 0.87
VHL-202ENST00000345392 TBC1D8O95759 1140 aa20.5■□□□□ 0.87
VHL-202ENST00000345392 CASP7P55210 303 aa20.5■□□□□ 0.87
VHL-202ENST00000345392 NBPF14Q5TI25 921 aa20.5■□□□□ 0.87
VHL-202ENST00000345392 NBPF10Q6P3W6 841 aaKnown RBP20.5■□□□□ 0.87
VHL-202ENST00000345392 NBPF15Q8N660 670 aa20.5■□□□□ 0.87
VHL-202ENST00000345392 CLIC6Q96NY7 704 aa20.5■□□□□ 0.87
VHL-202ENST00000345392 SRRTQ9BXP5 876 aaKnown RBP20.5■□□□□ 0.87
VHL-202ENST00000345392 TULP2O00295 520 aa20.5■□□□□ 0.87
VHL-202ENST00000345392 GNG11P61952 73 aa20.5■□□□□ 0.87
VHL-202ENST00000345392 PDILTQ8N807 584 aa20.5■□□□□ 0.87
VHL-202ENST00000345392 SMARCE1Q969G3 411 aa20.5■□□□□ 0.87
VHL-202ENST00000345392 SCN11AQ9UI33 1791 aa20.49■□□□□ 0.87
VHL-202ENST00000345392 TRPM3Q9HCF6 1732 aaPredicted RBP20.49■□□□□ 0.87
VHL-202ENST00000345392 CAMTA1Q9Y6Y1 1673 aa20.49■□□□□ 0.87
VHL-202ENST00000345392 SLC39A14Q15043 492 aa20.49■□□□□ 0.87
VHL-202ENST00000345392 WASHC4Q2M389 1173 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms