RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 EXOC6BQ9Y2D4 811 aa16.51■□□□□ 0.23
HERPUD1-202ENST00000344114 LEMD3Q9Y2U8 911 aa16.51■□□□□ 0.23
HERPUD1-202ENST00000344114 MAP3K11Q16584 847 aa16.51■□□□□ 0.23
HERPUD1-202ENST00000344114 FBXW7Q969H0 707 aa16.51■□□□□ 0.23
HERPUD1-202ENST00000344114 A0A1B0GUL6 1792 aa16.51■□□□□ 0.23
HERPUD1-202ENST00000344114 SSC5DA1L4H1 1573 aa16.5■□□□□ 0.23
HERPUD1-202ENST00000344114 PRKG1Q13976 671 aa16.5■□□□□ 0.23
HERPUD1-202ENST00000344114 TTLL5Q6EMB2 1281 aa16.5■□□□□ 0.23
HERPUD1-202ENST00000344114 SUCLG2Q96I99 432 aa16.5■□□□□ 0.23
HERPUD1-202ENST00000344114 ANGEL1Q9UNK9 670 aaKnown RBP16.5■□□□□ 0.23
HERPUD1-202ENST00000344114 MANSC4A6NHS7 340 aaPredicted RBP16.49■□□□□ 0.23
HERPUD1-202ENST00000344114 APBB1O00213 710 aa16.49■□□□□ 0.23
HERPUD1-202ENST00000344114 SMARCA5O60264 1052 aaPredicted RBP16.49■□□□□ 0.23
HERPUD1-202ENST00000344114 INHBEP58166 350 aa16.49■□□□□ 0.23
HERPUD1-202ENST00000344114 TTC22Q5TAA0 569 aa16.49■□□□□ 0.23
HERPUD1-202ENST00000344114 IFNL1Q8IU54 200 aa16.49■□□□□ 0.23
HERPUD1-202ENST00000344114 KIAA0825Q8IV33 1275 aa16.49■□□□□ 0.23
HERPUD1-202ENST00000344114 OSBPL3Q9H4L5 887 aa16.49■□□□□ 0.23
HERPUD1-202ENST00000344114 UPF2Q9HAU5 1272 aaKnown RBP16.49■□□□□ 0.23
HERPUD1-202ENST00000344114 NOP58Q9Y2X3 529 aaKnown RBP16.49■□□□□ 0.23
HERPUD1-202ENST00000344114 ZNF804BA4D1E1 1349 aa16.48■□□□□ 0.23
HERPUD1-202ENST00000344114 AOX1Q06278 1338 aa16.48■□□□□ 0.23
HERPUD1-202ENST00000344114 SALL3Q9BXA9 1300 aa16.48■□□□□ 0.23
HERPUD1-202ENST00000344114 HTTP42858 3142 aa16.48■□□□□ 0.23
HERPUD1-202ENST00000344114 ZBTB48P10074 688 aaPredicted RBP16.48■□□□□ 0.23
HERPUD1-202ENST00000344114 KLRK1P26718 216 aa16.48■□□□□ 0.23
HERPUD1-202ENST00000344114 OTOP1Q7RTM1 612 aa16.48■□□□□ 0.23
HERPUD1-202ENST00000344114 BICC1Q9H694 974 aaKnown RBP16.48■□□□□ 0.23
HERPUD1-202ENST00000344114 FZD1Q9UP38 647 aa16.48■□□□□ 0.23
HERPUD1-202ENST00000344114 EIF5BO60841 1220 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-202ENST00000344114 SURF6O75683 361 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-202ENST00000344114 IGHMBP2P38935 993 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-202ENST00000344114 ERC1Q8IUD2 1116 aa16.47■□□□□ 0.23
HERPUD1-202ENST00000344114 MTMR14Q8NCE2 650 aa16.47■□□□□ 0.23
HERPUD1-202ENST00000344114 KIF1BPQ96EK5 621 aa16.47■□□□□ 0.23
HERPUD1-202ENST00000344114 PLA2G12BQ9BX93 195 aa16.47■□□□□ 0.23
HERPUD1-202ENST00000344114 TRIM17Q9Y577 477 aa16.47■□□□□ 0.23
HERPUD1-202ENST00000344114 OTOFQ9HC10 1997 aa16.46■□□□□ 0.23
HERPUD1-202ENST00000344114 POTEFA5A3E0 1075 aa16.46■□□□□ 0.23
HERPUD1-202ENST00000344114 UNCXA6NJT0 531 aa16.46■□□□□ 0.23
HERPUD1-202ENST00000344114 H7C1W4 665 aa16.46■□□□□ 0.23
HERPUD1-202ENST00000344114 IGF2BP3O00425 579 aaKnown RBP eCLIP16.46■□□□□ 0.23
HERPUD1-202ENST00000344114 GTF2IP78347 998 aa16.46■□□□□ 0.23
HERPUD1-202ENST00000344114 HABP4Q5JVS0 413 aaKnown RBP16.46■□□□□ 0.23
HERPUD1-202ENST00000344114 DDRGK1Q96HY6 314 aa16.46■□□□□ 0.23
HERPUD1-202ENST00000344114 KAZALD1Q96I82 304 aa16.46■□□□□ 0.23
HERPUD1-202ENST00000344114 WNK4Q96J92 1243 aa16.46■□□□□ 0.23
HERPUD1-202ENST00000344114 ANKRD2Q9GZV1 360 aa16.46■□□□□ 0.23
HERPUD1-202ENST00000344114 DEFB129Q9H1M3 183 aa16.46■□□□□ 0.23
HERPUD1-202ENST00000344114 PPP2R3BQ9Y5P8 575 aa16.46■□□□□ 0.23
HERPUD1-202ENST00000344114 IRS2Q9Y4H2 1338 aa16.45■□□□□ 0.22
HERPUD1-202ENST00000344114 RHPN1Q8TCX5 695 aa16.45■□□□□ 0.22
HERPUD1-202ENST00000344114 SLC10A4Q96EP9 437 aa16.45■□□□□ 0.22
HERPUD1-202ENST00000344114 IPO9Q96P70 1041 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-202ENST00000344114 CDC45O75419 566 aa16.44■□□□□ 0.22
HERPUD1-202ENST00000344114 GSPT1P15170 499 aaKnown RBP16.44■□□□□ 0.22
HERPUD1-202ENST00000344114 ITGA6P23229 1130 aa16.44■□□□□ 0.22
HERPUD1-202ENST00000344114 PDE1AP54750 535 aa16.44■□□□□ 0.22
HERPUD1-202ENST00000344114 CASP7P55210 303 aa16.44■□□□□ 0.22
HERPUD1-202ENST00000344114 RABL6Q3YEC7 729 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-202ENST00000344114 UBE3BQ7Z3V4 1068 aa16.44■□□□□ 0.22
HERPUD1-202ENST00000344114 OTUD7AQ8TE49 926 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-202ENST00000344114 CLMNQ96JQ2 1002 aa16.44■□□□□ 0.22
HERPUD1-202ENST00000344114 CD209Q9NNX6 404 aa16.44■□□□□ 0.22
HERPUD1-202ENST00000344114 PTPN22Q9Y2R2 807 aa16.44■□□□□ 0.22
HERPUD1-202ENST00000344114 MKI67P46013 3256 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-202ENST00000344114 PPP1R12BO60237 982 aaPredicted RBP16.43■□□□□ 0.22
HERPUD1-202ENST00000344114 SEC24BO95487 1268 aa16.43■□□□□ 0.22
HERPUD1-202ENST00000344114 CSF1RP07333 972 aa16.43■□□□□ 0.22
HERPUD1-202ENST00000344114 MX1P20591 662 aa16.43■□□□□ 0.22
HERPUD1-202ENST00000344114 OS9Q13438 667 aaPredicted RBP16.43■□□□□ 0.22
HERPUD1-202ENST00000344114 DLGAP5Q15398 846 aa16.43■□□□□ 0.22
HERPUD1-202ENST00000344114 C15orf52Q6ZUT6 534 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-202ENST00000344114 CERS5Q8N5B7 392 aa16.43■□□□□ 0.22
HERPUD1-202ENST00000344114 ERO1AQ96HE7 468 aa16.43■□□□□ 0.22
HERPUD1-202ENST00000344114 STAP2Q9UGK3 403 aa16.43■□□□□ 0.22
HERPUD1-202ENST00000344114 MYH7P12883 1935 aa16.42■□□□□ 0.22
HERPUD1-202ENST00000344114 CHRNDQ07001 517 aa16.42■□□□□ 0.22
HERPUD1-202ENST00000344114 ARMC5Q96C12 935 aa16.42■□□□□ 0.22
HERPUD1-202ENST00000344114 MPHOSPH8Q99549 860 aa16.42■□□□□ 0.22
HERPUD1-202ENST00000344114 PCDHAC2Q9Y5I4 1007 aa16.42■□□□□ 0.22
HERPUD1-202ENST00000344114 TESPA1A2RU30 521 aaPredicted RBP16.41■□□□□ 0.22
HERPUD1-202ENST00000344114 GJA5P36382 358 aa16.41■□□□□ 0.22
HERPUD1-202ENST00000344114 FKBP1AP62942 108 aaKnown RBP16.41■□□□□ 0.22
HERPUD1-202ENST00000344114 CD99L2Q8TCZ2 262 aa16.41■□□□□ 0.22
HERPUD1-202ENST00000344114 TBC1D32Q96NH3 1257 aa16.41■□□□□ 0.22
HERPUD1-202ENST00000344114 ARAP2Q8WZ64 1704 aa16.41■□□□□ 0.22
HERPUD1-202ENST00000344114 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
HERPUD1-202ENST00000344114 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
HERPUD1-202ENST00000344114 CRHR2Q13324 411 aa16.4■□□□□ 0.22
HERPUD1-202ENST00000344114 SUPT20HL1Q3ZLR7 823 aa16.4■□□□□ 0.22
HERPUD1-202ENST00000344114 EPHA10Q5JZY3 1008 aa16.4■□□□□ 0.22
HERPUD1-202ENST00000344114 CENPFP49454 3210 aa16.4■□□□□ 0.22
HERPUD1-202ENST00000344114 KIAA0100Q14667 2235 aaKnown RBP16.4■□□□□ 0.22
HERPUD1-202ENST00000344114 USP2O75604 605 aaPredicted RBP16.39■□□□□ 0.21
HERPUD1-202ENST00000344114 IL1R1P14778 569 aa16.39■□□□□ 0.21
HERPUD1-202ENST00000344114 KCNJ4P48050 445 aa16.39■□□□□ 0.21
HERPUD1-202ENST00000344114 IREB2P48200 963 aaKnown RBP16.39■□□□□ 0.21
HERPUD1-202ENST00000344114 CAP1Q01518 475 aa16.39■□□□□ 0.21
HERPUD1-202ENST00000344114 G3BP1Q13283 466 aaKnown RBP eCLIP16.39■□□□□ 0.213e-10■■□□□ 13.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms