RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 TM4SF4P48230 202 aa22.36■■□□□ 1.17
USF2-202ENST00000343550 RGS19P49795 217 aa22.36■■□□□ 1.17
USF2-202ENST00000343550 FAM84BQ96KN1 310 aaPredicted RBP22.36■■□□□ 1.17
USF2-202ENST00000343550 ANGEL1Q9UNK9 670 aaKnown RBP22.36■■□□□ 1.17
USF2-202ENST00000343550 PPP2R3BQ9Y5P8 575 aa22.36■■□□□ 1.17
USF2-202ENST00000343550 COL1A1P02452 1464 aaPredicted RBP22.36■■□□□ 1.17
USF2-202ENST00000343550 CLRN2A0PK11 232 aa22.36■■□□□ 1.17
USF2-202ENST00000343550 IL15P40933 162 aaPredicted RBP22.36■■□□□ 1.17
USF2-202ENST00000343550 MKRN3Q13064 507 aaKnown RBP22.36■■□□□ 1.17
USF2-202ENST00000343550 DDX19BQ9UMR2 479 aa22.36■■□□□ 1.17
USF2-202ENST00000343550 FGFR2P21802 821 aa22.35■■□□□ 1.17
USF2-202ENST00000343550 RBM5P52756 815 aaKnown RBP eCLIP22.35■■□□□ 1.17
USF2-202ENST00000343550 POLA2Q14181 598 aa22.35■■□□□ 1.17
USF2-202ENST00000343550 MFSD14BQ5SR56 506 aa22.35■■□□□ 1.17
USF2-202ENST00000343550 CEP126Q9P2H0 1117 aa22.35■■□□□ 1.17
USF2-202ENST00000343550 FZD1Q9UP38 647 aa22.35■■□□□ 1.17
USF2-202ENST00000343550 TBC1D8O95759 1140 aa22.34■■□□□ 1.17
USF2-202ENST00000343550 MLLT1Q03111 559 aaPredicted RBP22.34■■□□□ 1.17
USF2-202ENST00000343550 PUM3Q15397 648 aaKnown RBP22.34■■□□□ 1.17
USF2-202ENST00000343550 SSH3Q8TE77 659 aa22.34■■□□□ 1.17
USF2-202ENST00000343550 AOX1Q06278 1338 aa22.33■■□□□ 1.17
USF2-202ENST00000343550 FBXO33Q7Z6M2 555 aa22.33■■□□□ 1.17
USF2-202ENST00000343550 VEZTQ9HBM0 779 aa22.33■■□□□ 1.17
USF2-202ENST00000343550 ZBTB40Q9NUA8 1239 aa22.33■■□□□ 1.17
USF2-202ENST00000343550 PPP1R12BO60237 982 aaPredicted RBP22.32■■□□□ 1.16
USF2-202ENST00000343550 SREBF2Q12772 1141 aa22.32■■□□□ 1.16
USF2-202ENST00000343550 MAP3K11Q16584 847 aa22.32■■□□□ 1.16
USF2-202ENST00000343550 SUPT20HL1Q3ZLR7 823 aa22.32■■□□□ 1.16
USF2-202ENST00000343550 SPRYD7Q5W111 196 aa22.32■■□□□ 1.16
USF2-202ENST00000343550 CTU1Q7Z7A3 348 aaKnown RBP22.32■■□□□ 1.16
USF2-202ENST00000343550 TTF2Q9UNY4 1162 aaKnown RBP22.32■■□□□ 1.16
USF2-202ENST00000343550 IFIT1P09914 478 aaKnown RBP22.31■■□□□ 1.16
USF2-202ENST00000343550 VPS37DQ86XT2 251 aa22.31■■□□□ 1.16
USF2-202ENST00000343550 LPIN2Q92539 896 aa22.31■■□□□ 1.16
USF2-202ENST00000343550 SLC10A4Q96EP9 437 aa22.31■■□□□ 1.16
USF2-202ENST00000343550 SERPINA10Q9UK55 444 aa22.31■■□□□ 1.16
USF2-202ENST00000343550 CAVIN4Q5BKX8 364 aa22.31■■□□□ 1.16
USF2-202ENST00000343550 CEP85Q6P2H3 762 aa22.31■■□□□ 1.16
USF2-202ENST00000343550 CHMP4BQ9H444 224 aaKnown RBP22.31■■□□□ 1.16
USF2-202ENST00000343550 G3BP1Q13283 466 aaKnown RBP eCLIP22.3■■□□□ 1.16
USF2-202ENST00000343550 RASA3Q14644 834 aa22.3■■□□□ 1.16
USF2-202ENST00000343550 NBPF12Q5TAG4 269 aaPredicted RBP22.3■■□□□ 1.16
USF2-202ENST00000343550 ZNF296Q8WUU4 475 aaPredicted RBP22.3■■□□□ 1.16
USF2-202ENST00000343550 SLC5A1P13866 664 aa22.29■■□□□ 1.16
USF2-202ENST00000343550 BCAMP50895 628 aa22.29■■□□□ 1.16
USF2-202ENST00000343550 TFCP2Q12800 502 aa22.29■■□□□ 1.16
USF2-202ENST00000343550 SSC5DA1L4H1 1573 aa22.29■■□□□ 1.16
USF2-202ENST00000343550 UNCXA6NJT0 531 aa22.28■■□□□ 1.16
USF2-202ENST00000343550 ATP2B3Q16720 1220 aa22.28■■□□□ 1.16
USF2-202ENST00000343550 SPDYE2Q495Y8 402 aa22.28■■□□□ 1.16
USF2-202ENST00000343550 CLMNQ96JQ2 1002 aa22.28■■□□□ 1.16
USF2-202ENST00000343550 TDRD3Q9H7E2 651 aaKnown RBP22.28■■□□□ 1.16
USF2-202ENST00000343550 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.28■■□□□ 1.16
USF2-202ENST00000343550 ZNF70Q9UC06 446 aaPredicted RBP22.28■■□□□ 1.16
USF2-202ENST00000343550 IQSEC3Q9UPP2 1182 aaPredicted RBP22.28■■□□□ 1.16
USF2-202ENST00000343550 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.28■■□□□ 1.16
USF2-202ENST00000343550 GPR25O00155 361 aa22.27■■□□□ 1.16
USF2-202ENST00000343550 RRP1P56182 461 aaKnown RBP22.27■■□□□ 1.16
USF2-202ENST00000343550 TNFAIP1Q13829 316 aa22.27■■□□□ 1.16
USF2-202ENST00000343550 NOM1Q5C9Z4 860 aaKnown RBP22.27■■□□□ 1.16
USF2-202ENST00000343550 ECM29Q5VYK3 1845 aa22.27■■□□□ 1.15
USF2-202ENST00000343550 MANSC4A6NHS7 340 aaPredicted RBP22.26■■□□□ 1.15
USF2-202ENST00000343550 FRAT2O75474 233 aaPredicted RBP22.26■■□□□ 1.15
USF2-202ENST00000343550 USP2O75604 605 aaPredicted RBP22.26■■□□□ 1.15
USF2-202ENST00000343550 SURF6O75683 361 aaKnown RBP22.26■■□□□ 1.15
USF2-202ENST00000343550 ZBTB48P10074 688 aaPredicted RBP22.26■■□□□ 1.15
USF2-202ENST00000343550 CRKP46108 304 aa22.26■■□□□ 1.15
USF2-202ENST00000343550 INHBEP58166 350 aa22.26■■□□□ 1.15
USF2-202ENST00000343550 TIMM10P62072 90 aa22.26■■□□□ 1.15
USF2-202ENST00000343550 RPAP2Q8IXW5 612 aaPredicted RBP22.26■■□□□ 1.15
USF2-202ENST00000343550 CFHR5Q9BXR6 569 aa22.26■■□□□ 1.15
USF2-202ENST00000343550 NOP58Q9Y2X3 529 aaKnown RBP22.26■■□□□ 1.15
USF2-202ENST00000343550 IREB2P48200 963 aaKnown RBP22.26■■□□□ 1.15
USF2-202ENST00000343550 CHAF1AQ13111 956 aaPredicted RBP22.26■■□□□ 1.15
USF2-202ENST00000343550 GRIK5Q16478 980 aa22.26■■□□□ 1.15
USF2-202ENST00000343550 PKN2Q16513 984 aaKnown RBP22.26■■□□□ 1.15
USF2-202ENST00000343550 TBC1D22AQ8WUA7 517 aa22.26■■□□□ 1.15
USF2-202ENST00000343550 WNK4Q96J92 1243 aa22.26■■□□□ 1.15
USF2-202ENST00000343550 AKAP2Q9Y2D5 859 aa22.26■■□□□ 1.15
USF2-202ENST00000343550 ALDH1A1P00352 501 aa22.25■■□□□ 1.15
USF2-202ENST00000343550 SIRT2Q8IXJ6 389 aa22.24■■□□□ 1.15
USF2-202ENST00000343550 R3HDMLQ9H3Y0 253 aa22.24■■□□□ 1.15
USF2-202ENST00000343550 HDLBPQ00341 1268 aaKnown RBP22.23■■□□□ 1.15
USF2-202ENST00000343550 IFNL1Q8IU54 200 aa22.23■■□□□ 1.15
USF2-202ENST00000343550 ANKRD13AQ8IZ07 590 aa22.23■■□□□ 1.15
USF2-202ENST00000343550 A0A1B0GUL7 405 aa22.22■■□□□ 1.15
USF2-202ENST00000343550 TCP10L2B9ZVM9 353 aa22.22■■□□□ 1.15
USF2-202ENST00000343550 ADORA1P30542 326 aa22.22■■□□□ 1.15
USF2-202ENST00000343550 TEPSINQ96N21 525 aa22.22■■□□□ 1.15
USF2-202ENST00000343550 HPS5Q9UPZ3 1129 aa22.22■■□□□ 1.15
USF2-202ENST00000343550 FKTNO75072 461 aa22.21■■□□□ 1.15
USF2-202ENST00000343550 TNNI2P48788 182 aa22.21■■□□□ 1.15
USF2-202ENST00000343550 SOX10P56693 466 aa22.21■■□□□ 1.15
USF2-202ENST00000343550 OS9Q13438 667 aaPredicted RBP22.21■■□□□ 1.15
USF2-202ENST00000343550 CDAN1Q8IWY9 1227 aa22.21■■□□□ 1.15
USF2-202ENST00000343550 TEKT1Q969V4 418 aa22.21■■□□□ 1.15
USF2-202ENST00000343550 XAGE2Q96GT9 111 aa22.21■■□□□ 1.15
USF2-202ENST00000343550 NEUROD6Q96NK8 337 aa22.21■■□□□ 1.15
USF2-202ENST00000343550 MRIQ9BWK5 157 aa22.21■■□□□ 1.15
USF2-202ENST00000343550 TMEM39BQ9GZU3 492 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms