RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 HOOK1Q9UJC3 728 aaKnown RBP16.27■□□□□ 0.19
PCDH8-201ENST00000338862 MAST3O60307 1309 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 UBE2Q2LH0YL09 131 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 FOXN1O15353 648 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 TDO2P48775 406 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 VPS37DQ86XT2 251 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 GOLGA6L1Q8N7Z2 621 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 EEF2KMTQ96G04 330 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 NEO1Q92859 1461 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 KIF20BQ96Q89 1820 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 REREQ9P2R6 1566 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 ERICH2A1L162 156 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 POLR2DO15514 142 aaKnown RBP16.26■□□□□ 0.19
PCDH8-201ENST00000338862 HSP90B2PQ58FF3 399 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 DHX58Q96C10 678 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 BAG1Q99933 345 aaPredicted RBP16.26■□□□□ 0.19
PCDH8-201ENST00000338862 ABCF2Q9UG63 623 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 TSPOAP1O95153 1857 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 ANKRD65E5RJM6 399 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 NLRP12P59046 1061 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 ARFGAP3Q9NP61 516 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 BABAM1Q9NWV8 329 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 RAI14Q9P0K7 980 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 NFE2L3Q9Y4A8 694 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 SLC12A7Q9Y666 1083 aa16.26■□□□□ 0.19
PCDH8-201ENST00000338862 TPM1P09493 284 aa16.25■□□□□ 0.19
PCDH8-201ENST00000338862 KRT40Q6A162 431 aa16.25■□□□□ 0.19
PCDH8-201ENST00000338862 DIP2CQ9Y2E4 1556 aa16.25■□□□□ 0.19
PCDH8-201ENST00000338862 GPAA1O43292 621 aa16.25■□□□□ 0.19
PCDH8-201ENST00000338862 OAS2P29728 719 aaKnown RBP16.25■□□□□ 0.19
PCDH8-201ENST00000338862 IFNL2Q8IZJ0 200 aa16.25■□□□□ 0.19
PCDH8-201ENST00000338862 LLPHQ9BRT6 129 aaKnown RBP16.25■□□□□ 0.19
PCDH8-201ENST00000338862 TBC1D2BQ9UPU7 963 aa16.25■□□□□ 0.19
PCDH8-201ENST00000338862 CCP110O43303 1012 aa16.24■□□□□ 0.19
PCDH8-201ENST00000338862 CASP1P29466 404 aa16.24■□□□□ 0.19
PCDH8-201ENST00000338862 CCT6AP40227 531 aaKnown RBP16.24■□□□□ 0.19
PCDH8-201ENST00000338862 IFIT5Q13325 482 aaKnown RBP16.24■□□□□ 0.19
PCDH8-201ENST00000338862 PCDHA5Q9Y5H7 936 aa16.24■□□□□ 0.19
PCDH8-201ENST00000338862 KIF28PB7ZC32 967 aa16.24■□□□□ 0.19
PCDH8-201ENST00000338862 ZBTB43O43298 467 aa16.24■□□□□ 0.19
PCDH8-201ENST00000338862 SLFN14P0C7P3 912 aa16.24■□□□□ 0.19
PCDH8-201ENST00000338862 RBM6P78332 1123 aaKnown RBP16.24■□□□□ 0.19
PCDH8-201ENST00000338862 FBXO18Q8NFZ0 1043 aa16.24■□□□□ 0.19
PCDH8-201ENST00000338862 NAPBQ9H115 298 aa16.24■□□□□ 0.19
PCDH8-201ENST00000338862 VPS18Q9P253 973 aa16.24■□□□□ 0.19
PCDH8-201ENST00000338862 PPP2R3AQ06190 1150 aa16.24■□□□□ 0.19
PCDH8-201ENST00000338862 FMR1NBQ8N0W7 255 aaPredicted RBP16.24■□□□□ 0.19
PCDH8-201ENST00000338862 XAGE2Q96GT9 111 aa16.24■□□□□ 0.19
PCDH8-201ENST00000338862 PUS7LQ9H0K6 701 aaKnown RBP16.24■□□□□ 0.19
PCDH8-201ENST00000338862 KCNH3Q9ULD8 1083 aa16.24■□□□□ 0.19
PCDH8-201ENST00000338862 ZNF609O15014 1411 aa16.24■□□□□ 0.19
PCDH8-201ENST00000338862 NEURL4Q96JN8 1562 aa16.24■□□□□ 0.19
PCDH8-201ENST00000338862 SNAP23O00161 211 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 EVA1CP58658 441 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 CTDSPL2Q05D32 466 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 SMARCE1Q969G3 411 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 TBX22Q9Y458 520 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 PNMA6AP0CW24 399 aaPredicted RBP16.23■□□□□ 0.19
PCDH8-201ENST00000338862 IL15P40933 162 aaPredicted RBP16.23■□□□□ 0.19
PCDH8-201ENST00000338862 ZNF569Q5MCW4 686 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 JAKMIP3Q5VZ66 844 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 WWC2Q6AWC2 1192 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 TRIM22Q8IYM9 498 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 SYNE4Q8N205 404 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 MIGA1Q8NAN2 632 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 SIRT1Q96EB6 747 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.23■□□□□ 0.19
PCDH8-201ENST00000338862 SLC52A2Q9HAB3 445 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 COPRSQ9NQ92 184 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 DNA2P51530 1060 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 HNRNPH2P55795 449 aaKnown RBP16.23■□□□□ 0.19
PCDH8-201ENST00000338862 DHX8Q14562 1220 aaKnown RBP16.23■□□□□ 0.19
PCDH8-201ENST00000338862 SMYD4Q8IYR2 804 aaPredicted RBP16.23■□□□□ 0.19
PCDH8-201ENST00000338862 CCDC191Q8NCU4 936 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 TMEM131LA2VDJ0 1609 aa16.23■□□□□ 0.19
PCDH8-201ENST00000338862 EYA2O00167 538 aa16.22■□□□□ 0.19
PCDH8-201ENST00000338862 CERS3Q8IU89 383 aa16.22■□□□□ 0.19
PCDH8-201ENST00000338862 CDC42BPGQ6DT37 1551 aa16.22■□□□□ 0.19
PCDH8-201ENST00000338862 BTBD18B2RXH4 712 aa16.22■□□□□ 0.19
PCDH8-201ENST00000338862 WDHD1O75717 1129 aaPredicted RBP16.22■□□□□ 0.19
PCDH8-201ENST00000338862 LEKR1Q6ZMV7 388 aa16.22■□□□□ 0.19
PCDH8-201ENST00000338862 CAGE1Q8TC20 777 aa16.22■□□□□ 0.19
PCDH8-201ENST00000338862 MORC2Q9Y6X9 1032 aaPredicted RBP16.22■□□□□ 0.19
PCDH8-201ENST00000338862 FDPSP14324 419 aaKnown RBP16.21■□□□□ 0.19
PCDH8-201ENST00000338862 SSRP1Q08945 709 aaKnown RBP16.21■□□□□ 0.19
PCDH8-201ENST00000338862 DHX37Q8IY37 1157 aaKnown RBP16.21■□□□□ 0.19
PCDH8-201ENST00000338862 HELLSQ9NRZ9 838 aa16.21■□□□□ 0.19
PCDH8-201ENST00000338862 USP31Q70CQ4 1352 aa16.21■□□□□ 0.19
PCDH8-201ENST00000338862 TAF3Q5VWG9 929 aa16.21■□□□□ 0.19
PCDH8-201ENST00000338862 AK7Q96M32 723 aa16.21■□□□□ 0.19
PCDH8-201ENST00000338862 PLEKHA4Q9H4M7 779 aa16.21■□□□□ 0.19
PCDH8-201ENST00000338862 RTEL1Q9NZ71 1219 aa16.21■□□□□ 0.19
PCDH8-201ENST00000338862 PPP2R2CQ9Y2T4 447 aa16.21■□□□□ 0.19
PCDH8-201ENST00000338862 NRKQ7Z2Y5 1582 aa16.21■□□□□ 0.19
PCDH8-201ENST00000338862 KIF5CO60282 957 aa16.21■□□□□ 0.19
PCDH8-201ENST00000338862 CDKL5O76039 1030 aa16.21■□□□□ 0.19
PCDH8-201ENST00000338862 ANKLE2Q86XL3 938 aa16.21■□□□□ 0.19
PCDH8-201ENST00000338862 PLIN2Q99541 437 aa16.21■□□□□ 0.19
PCDH8-201ENST00000338862 NUP88Q99567 741 aaPredicted RBP16.21■□□□□ 0.19
PCDH8-201ENST00000338862 CABP5Q9NP86 173 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms