RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 POLD4Q9HCU8 107 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 ENGASEQ8NFI3 743 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 FAM212AQ96EL1 285 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 TM6SF1Q9BZW5 370 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 DBNLQ9UJU6 430 aaKnown RBP12.82□□□□□ -0.36
CCDC87-201ENST00000333861 EFCAB8A8MWE9 144 aa12.81□□□□□ -0.36
CCDC87-201ENST00000333861 HOXC9P31274 260 aa12.81□□□□□ -0.36
CCDC87-201ENST00000333861 CCDC158Q5M9N0 1113 aa12.81□□□□□ -0.36
CCDC87-201ENST00000333861 GEMIN8Q9NWZ8 242 aaKnown RBP12.81□□□□□ -0.36
CCDC87-201ENST00000333861 CFAP45Q9UL16 551 aa12.81□□□□□ -0.36
CCDC87-201ENST00000333861 PEAK1Q9H792 1746 aa12.81□□□□□ -0.36
CCDC87-201ENST00000333861 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
CCDC87-201ENST00000333861 PSDA5PKW4 1024 aaPredicted RBP12.81□□□□□ -0.36
CCDC87-201ENST00000333861 CDC27P30260 824 aa12.81□□□□□ -0.36
CCDC87-201ENST00000333861 UBASH3AP57075 661 aa12.81□□□□□ -0.36
CCDC87-201ENST00000333861 FAM193AP78312 1265 aa12.81□□□□□ -0.36
CCDC87-201ENST00000333861 FAM160A1Q05DH4 1040 aa12.81□□□□□ -0.36
CCDC87-201ENST00000333861 LRRFIP1Q32MZ4 808 aaKnown RBP12.81□□□□□ -0.36
CCDC87-201ENST00000333861 CT47A1Q5JQC4 288 aaPredicted RBP12.81□□□□□ -0.36
CCDC87-201ENST00000333861 CCDC102AQ96A19 550 aa12.81□□□□□ -0.36
CCDC87-201ENST00000333861 FANCLQ9NW38 375 aa12.81□□□□□ -0.36
CCDC87-201ENST00000333861 VWA3AA6NCI4 1184 aa12.8□□□□□ -0.36
CCDC87-201ENST00000333861 CASP1P29466 404 aa12.8□□□□□ -0.36
CCDC87-201ENST00000333861 MRPS25P82663 173 aaKnown RBP12.8□□□□□ -0.36
CCDC87-201ENST00000333861 DHX37Q8IY37 1157 aaKnown RBP12.8□□□□□ -0.36
CCDC87-201ENST00000333861 GOLGA6L1Q8N7Z2 621 aa12.8□□□□□ -0.36
CCDC87-201ENST00000333861 INCENPQ9NQS7 918 aa12.8□□□□□ -0.36
CCDC87-201ENST00000333861 CHRM1P11229 460 aaPredicted RBP12.8□□□□□ -0.36
CCDC87-201ENST00000333861 GUCY2CP25092 1073 aa12.8□□□□□ -0.36
CCDC87-201ENST00000333861 MYD88Q99836 296 aa12.8□□□□□ -0.36
CCDC87-201ENST00000333861 AOX1Q06278 1338 aa12.8□□□□□ -0.36
CCDC87-201ENST00000333861 FLT4P35916 1363 aa12.8□□□□□ -0.36
CCDC87-201ENST00000333861 WDHD1O75717 1129 aaPredicted RBP12.79□□□□□ -0.36
CCDC87-201ENST00000333861 SLC3A2P08195 630 aaKnown RBP12.79□□□□□ -0.36
CCDC87-201ENST00000333861 FDPSP14324 419 aaKnown RBP12.79□□□□□ -0.36
CCDC87-201ENST00000333861 PDE4BQ07343 736 aa12.79□□□□□ -0.36
CCDC87-201ENST00000333861 MRPS27Q92552 414 aaKnown RBP12.79□□□□□ -0.36
CCDC87-201ENST00000333861 TFR2Q9UP52 801 aa12.79□□□□□ -0.36
CCDC87-201ENST00000333861 MROH7-TTC4A0A0A0MT08 1334 aa12.79□□□□□ -0.36
CCDC87-201ENST00000333861 PLEKHG2Q9H7P9 1386 aa12.79□□□□□ -0.36
CCDC87-201ENST00000333861 DCCP43146 1447 aa12.79□□□□□ -0.36
CCDC87-201ENST00000333861 ZNF202O95125 648 aa12.79□□□□□ -0.36
CCDC87-201ENST00000333861 CHRNA2Q15822 529 aa12.79□□□□□ -0.36
CCDC87-201ENST00000333861 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.79□□□□□ -0.36
CCDC87-201ENST00000333861 RIC3Q7Z5B4 369 aa12.79□□□□□ -0.36
CCDC87-201ENST00000333861 FMR1NBQ8N0W7 255 aaPredicted RBP12.79□□□□□ -0.36
CCDC87-201ENST00000333861 CCDC150Q8NCX0 1101 aa12.79□□□□□ -0.36
CCDC87-201ENST00000333861 EXOC4Q96A65 974 aa12.79□□□□□ -0.36
CCDC87-201ENST00000333861 ZNF594Q96JF6 807 aaPredicted RBP12.79□□□□□ -0.36
CCDC87-201ENST00000333861 MYCBPQ99417 103 aaPredicted RBP12.79□□□□□ -0.36
CCDC87-201ENST00000333861 MYL10Q9BUA6 226 aa12.79□□□□□ -0.36
CCDC87-201ENST00000333861 KIAA1468Q9P260 1216 aa12.79□□□□□ -0.36
CCDC87-201ENST00000333861 SBNO1A3KN83 1393 aa12.79□□□□□ -0.36
CCDC87-201ENST00000333861 PSEN1P49768 467 aa12.78□□□□□ -0.36
CCDC87-201ENST00000333861 NCAPHQ15003 741 aa12.78□□□□□ -0.36
CCDC87-201ENST00000333861 PLEKHO1Q53GL0 409 aaPredicted RBP12.78□□□□□ -0.36
CCDC87-201ENST00000333861 MICALL1Q8N3F8 863 aa12.78□□□□□ -0.36
CCDC87-201ENST00000333861 KCNH5Q8NCM2 988 aa12.78□□□□□ -0.36
CCDC87-201ENST00000333861 PNKPQ96T60 521 aa12.78□□□□□ -0.36
CCDC87-201ENST00000333861 RCOR1Q9UKL0 485 aa12.78□□□□□ -0.36
CCDC87-201ENST00000333861 AKAP2Q9Y2D5 859 aa12.78□□□□□ -0.36
CCDC87-201ENST00000333861 ZMYND10O75800 440 aa12.78□□□□□ -0.36
CCDC87-201ENST00000333861 STX17P56962 302 aa12.78□□□□□ -0.36
CCDC87-201ENST00000333861 PIP4K2BP78356 416 aa12.78□□□□□ -0.36
CCDC87-201ENST00000333861 ZNF530Q6P9A1 599 aaPredicted RBP12.78□□□□□ -0.36
CCDC87-201ENST00000333861 CCDC12Q8WUD4 166 aaPredicted RBP12.78□□□□□ -0.36
CCDC87-201ENST00000333861 NAT10Q9H0A0 1025 aaKnown RBP12.78□□□□□ -0.36
CCDC87-201ENST00000333861 PPP2R2CQ9Y2T4 447 aa12.78□□□□□ -0.36
CCDC87-201ENST00000333861 MAP3K5Q99683 1374 aa12.78□□□□□ -0.36
CCDC87-201ENST00000333861 DHX8Q14562 1220 aaKnown RBP12.78□□□□□ -0.36
CCDC87-201ENST00000333861 NCAPGQ9BPX3 1015 aa12.78□□□□□ -0.36
CCDC87-201ENST00000333861 ZNF609O15014 1411 aa12.77□□□□□ -0.36
CCDC87-201ENST00000333861 PHLPP2Q6ZVD8 1323 aa12.77□□□□□ -0.36
CCDC87-201ENST00000333861 XIRP1Q702N8 1843 aaKnown RBP12.77□□□□□ -0.36
CCDC87-201ENST00000333861 NRDCO43847 1150 aa12.77□□□□□ -0.36
CCDC87-201ENST00000333861 A1BGP04217 495 aa12.77□□□□□ -0.36
CCDC87-201ENST00000333861 PFKFB1P16118 471 aa12.77□□□□□ -0.36
CCDC87-201ENST00000333861 DNAJC21Q5F1R6 531 aaKnown RBP12.77□□□□□ -0.36
CCDC87-201ENST00000333861 KLHL10Q6JEL2 608 aa12.77□□□□□ -0.36
CCDC87-201ENST00000333861 CMTR1Q8N1G2 835 aaKnown RBP12.77□□□□□ -0.36
CCDC87-201ENST00000333861 RIN2Q8WYP3 895 aaPredicted RBP12.77□□□□□ -0.36
CCDC87-201ENST00000333861 PHKBQ93100 1093 aa12.77□□□□□ -0.36
CCDC87-201ENST00000333861 HSD3B7Q9H2F3 369 aa12.77□□□□□ -0.36
CCDC87-201ENST00000333861 ABCB6Q9NP58 842 aa12.77□□□□□ -0.36
CCDC87-201ENST00000333861 CAVIN2O95810 425 aa12.77□□□□□ -0.37
CCDC87-201ENST00000333861 MAGEA9P43362 315 aa12.77□□□□□ -0.37
CCDC87-201ENST00000333861 GRIN1Q05586 938 aa12.77□□□□□ -0.37
CCDC87-201ENST00000333861 TTC19Q6DKK2 380 aaPredicted RBP12.77□□□□□ -0.37
CCDC87-201ENST00000333861 PI16Q6UXB8 463 aa12.77□□□□□ -0.37
CCDC87-201ENST00000333861 UBE3BQ7Z3V4 1068 aa12.77□□□□□ -0.37
CCDC87-201ENST00000333861 GPR161Q8N6U8 529 aaKnown RBP12.77□□□□□ -0.37
CCDC87-201ENST00000333861 DEF6Q9H4E7 631 aa12.77□□□□□ -0.37
CCDC87-201ENST00000333861 MRPL44Q9H9J2 332 aaKnown RBP12.77□□□□□ -0.37
CCDC87-201ENST00000333861 SOWAHDA6NJG2 315 aa12.76□□□□□ -0.37
CCDC87-201ENST00000333861 GRM8O00222 908 aa12.76□□□□□ -0.37
CCDC87-201ENST00000333861 ANKRD1Q15327 319 aa12.76□□□□□ -0.37
CCDC87-201ENST00000333861 LRRC31Q6UY01 552 aa12.76□□□□□ -0.37
CCDC87-201ENST00000333861 ERC1Q8IUD2 1116 aa12.76□□□□□ -0.37
CCDC87-201ENST00000333861 YY1AP1Q9H869 796 aa12.76□□□□□ -0.37
CCDC87-201ENST00000333861 SENP2Q9HC62 589 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms