RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 HHIPL1Q96JK4 782 aa13.54□□□□□ -0.24
APOBEC3B-201ENST00000333467 COL1A1P02452 1464 aaPredicted RBP13.54□□□□□ -0.24
APOBEC3B-201ENST00000333467 SEC24BO95487 1268 aa13.54□□□□□ -0.24
APOBEC3B-201ENST00000333467 HUNKP57058 714 aa13.54□□□□□ -0.24
APOBEC3B-201ENST00000333467 AIDAQ96BJ3 306 aa13.54□□□□□ -0.24
APOBEC3B-201ENST00000333467 MEIS3Q99687 375 aa13.54□□□□□ -0.24
APOBEC3B-201ENST00000333467 GBA2Q9HCG7 927 aaPredicted RBP13.54□□□□□ -0.24
APOBEC3B-201ENST00000333467 WBP1LQ9NX94 342 aa13.54□□□□□ -0.24
APOBEC3B-201ENST00000333467 HDAC9Q9UKV0 1011 aa13.54□□□□□ -0.24
APOBEC3B-201ENST00000333467 AOC2O75106 756 aa13.53□□□□□ -0.24
APOBEC3B-201ENST00000333467 RFX5P48382 616 aaPredicted RBP13.53□□□□□ -0.24
APOBEC3B-201ENST00000333467 LRRFIP2Q9Y608 721 aaKnown RBP13.53□□□□□ -0.24
APOBEC3B-201ENST00000333467 F8W031 263 aaPredicted RBP13.52□□□□□ -0.25
APOBEC3B-201ENST00000333467 PDE8BO95263 885 aa13.52□□□□□ -0.25
APOBEC3B-201ENST00000333467 MMP14P50281 582 aa13.52□□□□□ -0.25
APOBEC3B-201ENST00000333467 MAP2K1Q02750 393 aaPredicted RBP13.52□□□□□ -0.25
APOBEC3B-201ENST00000333467 BMP2KLQ5H9B9 411 aa13.52□□□□□ -0.25
APOBEC3B-201ENST00000333467 IFFO2Q5TF58 517 aa13.52□□□□□ -0.25
APOBEC3B-201ENST00000333467 SPDYE1Q8NFV5 336 aaPredicted RBP13.52□□□□□ -0.25
APOBEC3B-201ENST00000333467 C22orf23Q9BZE7 217 aa13.52□□□□□ -0.25
APOBEC3B-201ENST00000333467 SPDYE2BA6NHP3 402 aa13.51□□□□□ -0.25
APOBEC3B-201ENST00000333467 ZBTB7BO15156 539 aaPredicted RBP13.51□□□□□ -0.25
APOBEC3B-201ENST00000333467 SPDYE6P0CI01 402 aa13.51□□□□□ -0.25
APOBEC3B-201ENST00000333467 HIBADHP31937 336 aaKnown RBP13.51□□□□□ -0.25
APOBEC3B-201ENST00000333467 FKBP1AP62942 108 aaKnown RBP13.51□□□□□ -0.25
APOBEC3B-201ENST00000333467 PTPN12Q05209 780 aaKnown RBP13.51□□□□□ -0.25
APOBEC3B-201ENST00000333467 SPDYE2Q495Y8 402 aa13.51□□□□□ -0.25
APOBEC3B-201ENST00000333467 INTS3Q68E01 1043 aaKnown RBP13.51□□□□□ -0.25
APOBEC3B-201ENST00000333467 C2orf69Q8N8R5 385 aa13.51□□□□□ -0.25
APOBEC3B-201ENST00000333467 TDRD7Q8NHU6 1098 aaKnown RBP13.51□□□□□ -0.25
APOBEC3B-201ENST00000333467 ZBED3Q96IU2 234 aaPredicted RBP13.51□□□□□ -0.25
APOBEC3B-201ENST00000333467 FAM84BQ96KN1 310 aaPredicted RBP13.51□□□□□ -0.25
APOBEC3B-201ENST00000333467 ANTXR1Q9H6X2 564 aa13.51□□□□□ -0.25
APOBEC3B-201ENST00000333467 FAM205AQ6ZU69 1335 aa13.51□□□□□ -0.25
APOBEC3B-201ENST00000333467 EYA2O00167 538 aa13.5□□□□□ -0.25
APOBEC3B-201ENST00000333467 RBM25P49756 843 aaKnown RBP13.5□□□□□ -0.25
APOBEC3B-201ENST00000333467 PUM3Q15397 648 aaKnown RBP13.5□□□□□ -0.25
APOBEC3B-201ENST00000333467 MFSD14BQ5SR56 506 aa13.5□□□□□ -0.25
APOBEC3B-201ENST00000333467 CHD1LQ86WJ1 897 aa13.5□□□□□ -0.25
APOBEC3B-201ENST00000333467 APOBEC3FQ8IUX4 373 aaKnown RBP13.5□□□□□ -0.25
APOBEC3B-201ENST00000333467 SIL1Q9H173 461 aa13.5□□□□□ -0.25
APOBEC3B-201ENST00000333467 IQSEC3Q9UPP2 1182 aaPredicted RBP13.5□□□□□ -0.25
APOBEC3B-201ENST00000333467 PCDHAC2Q9Y5I4 1007 aa13.5□□□□□ -0.25
APOBEC3B-201ENST00000333467 SSC5DA1L4H1 1573 aa13.5□□□□□ -0.25
APOBEC3B-201ENST00000333467 CTCFP49711 727 aaPredicted RBP13.49□□□□□ -0.25
APOBEC3B-201ENST00000333467 DLGAP5Q15398 846 aa13.49□□□□□ -0.25
APOBEC3B-201ENST00000333467 PRAMEF18Q5VWM3 479 aa13.49□□□□□ -0.25
APOBEC3B-201ENST00000333467 RGMBQ6NW40 437 aa13.49□□□□□ -0.25
APOBEC3B-201ENST00000333467 VPS37DQ86XT2 251 aa13.49□□□□□ -0.25
APOBEC3B-201ENST00000333467 SNX21Q969T3 373 aa13.49□□□□□ -0.25
APOBEC3B-201ENST00000333467 TBC1D2Q9BYX2 928 aa13.49□□□□□ -0.25
APOBEC3B-201ENST00000333467 CASP8AP2Q9UKL3 1982 aa13.49□□□□□ -0.25
APOBEC3B-201ENST00000333467 FRAT2O75474 233 aaPredicted RBP13.49□□□□□ -0.25
APOBEC3B-201ENST00000333467 HSPA8P11142 646 aaKnown RBP13.49□□□□□ -0.25
APOBEC3B-201ENST00000333467 MAP2K2P36507 400 aa13.49□□□□□ -0.25
APOBEC3B-201ENST00000333467 NOGQ13253 232 aa13.49□□□□□ -0.25
APOBEC3B-201ENST00000333467 CFAP100Q494V2 611 aa13.49□□□□□ -0.25
APOBEC3B-201ENST00000333467 CAVIN4Q5BKX8 364 aa13.49□□□□□ -0.25
APOBEC3B-201ENST00000333467 ATG9AQ7Z3C6 839 aa13.49□□□□□ -0.25
APOBEC3B-201ENST00000333467 MYH2Q9UKX2 1941 aa13.48□□□□□ -0.25
APOBEC3B-201ENST00000333467 AOX1Q06278 1338 aa13.48□□□□□ -0.25
APOBEC3B-201ENST00000333467 FAM155AB1AL88 458 aaPredicted RBP13.48□□□□□ -0.25
APOBEC3B-201ENST00000333467 FGFR2P21802 821 aa13.48□□□□□ -0.25
APOBEC3B-201ENST00000333467 LBX1P52954 281 aa13.48□□□□□ -0.25
APOBEC3B-201ENST00000333467 CHAF1AQ13111 956 aaPredicted RBP13.48□□□□□ -0.25
APOBEC3B-201ENST00000333467 FBXO33Q7Z6M2 555 aa13.48□□□□□ -0.25
APOBEC3B-201ENST00000333467 TNS4Q8IZW8 715 aa13.48□□□□□ -0.25
APOBEC3B-201ENST00000333467 MTMR14Q8NCE2 650 aa13.48□□□□□ -0.25
APOBEC3B-201ENST00000333467 ZIC5Q96T25 663 aa13.48□□□□□ -0.25
APOBEC3B-201ENST00000333467 BEGAINQ9BUH8 593 aa13.48□□□□□ -0.25
APOBEC3B-201ENST00000333467 CHMP5Q9NZZ3 219 aa13.48□□□□□ -0.25
APOBEC3B-201ENST00000333467 TTF2Q9UNY4 1162 aaKnown RBP13.48□□□□□ -0.25
APOBEC3B-201ENST00000333467 PA2G4Q9UQ80 394 aaKnown RBP13.48□□□□□ -0.25
APOBEC3B-201ENST00000333467 HDAC5Q9UQL6 1122 aa13.48□□□□□ -0.25
APOBEC3B-201ENST00000333467 CLRN2A0PK11 232 aa13.47□□□□□ -0.25
APOBEC3B-201ENST00000333467 CIAO1O76071 339 aa13.47□□□□□ -0.25
APOBEC3B-201ENST00000333467 GNAI3P08754 354 aa13.47□□□□□ -0.25
APOBEC3B-201ENST00000333467 SLC10A3P09131 477 aa13.47□□□□□ -0.25
APOBEC3B-201ENST00000333467 IFIT1P09914 478 aaKnown RBP13.47□□□□□ -0.25
APOBEC3B-201ENST00000333467 SLC5A1P13866 664 aa13.47□□□□□ -0.25
APOBEC3B-201ENST00000333467 ZNF157P51786 506 aaPredicted RBP13.47□□□□□ -0.25
APOBEC3B-201ENST00000333467 FKBP1BP68106 108 aa13.47□□□□□ -0.25
APOBEC3B-201ENST00000333467 MOB2Q70IA6 237 aa13.47□□□□□ -0.25
APOBEC3B-201ENST00000333467 HSCBQ8IWL3 235 aa13.47□□□□□ -0.25
APOBEC3B-201ENST00000333467 PRDM10Q9NQV6 1147 aa13.47□□□□□ -0.25
APOBEC3B-201ENST00000333467 FBXO3Q9UK99 471 aa13.47□□□□□ -0.25
APOBEC3B-201ENST00000333467 MAST2Q6P0Q8 1798 aa13.46□□□□□ -0.25
APOBEC3B-201ENST00000333467 DOCK2Q92608 1830 aa13.46□□□□□ -0.25
APOBEC3B-201ENST00000333467 MYO1BO43795 1136 aa13.46□□□□□ -0.25
APOBEC3B-201ENST00000333467 PTMSP20962 102 aa13.46□□□□□ -0.25
APOBEC3B-201ENST00000333467 NF2P35240 595 aa13.46□□□□□ -0.25
APOBEC3B-201ENST00000333467 BCAMP50895 628 aa13.46□□□□□ -0.25
APOBEC3B-201ENST00000333467 RBM5P52756 815 aaKnown RBP eCLIP13.46□□□□□ -0.25
APOBEC3B-201ENST00000333467 GRIK5Q16478 980 aa13.46□□□□□ -0.25
APOBEC3B-201ENST00000333467 RASAL3Q86YV0 1011 aa13.46□□□□□ -0.25
APOBEC3B-201ENST00000333467 LPIN2Q92539 896 aa13.46□□□□□ -0.25
APOBEC3B-201ENST00000333467 TSKSQ9UJT2 592 aa13.46□□□□□ -0.25
APOBEC3B-201ENST00000333467 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.25
APOBEC3B-201ENST00000333467 SRGAP3O43295 1099 aa13.45□□□□□ -0.26
APOBEC3B-201ENST00000333467 TTLL12Q14166 644 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms