RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 CCDC82Q8N4S0 544 aa18.85■□□□□ 0.61
PACS1-201ENST00000320580 EHBP1Q8NDI1 1231 aa18.85■□□□□ 0.61
PACS1-201ENST00000320580 SPECC1Q5M775 1068 aa18.85■□□□□ 0.61
PACS1-201ENST00000320580 FANCLQ9NW38 375 aa18.85■□□□□ 0.61
PACS1-201ENST00000320580 RPSAP08865 295 aaKnown RBP18.84■□□□□ 0.61
PACS1-201ENST00000320580 LTKP29376 864 aa18.84■□□□□ 0.61
PACS1-201ENST00000320580 HPDP32754 393 aaPredicted RBP18.84■□□□□ 0.61
PACS1-201ENST00000320580 OSBPL5Q9H0X9 879 aaPredicted RBP18.84■□□□□ 0.61
PACS1-201ENST00000320580 TTF2Q9UNY4 1162 aaKnown RBP18.84■□□□□ 0.61
PACS1-201ENST00000320580 KLF18A0A0U1RQI7 1052 aa18.84■□□□□ 0.61
PACS1-201ENST00000320580 ATP1A3P13637 1013 aa18.84■□□□□ 0.61
PACS1-201ENST00000320580 NDUFA8P51970 172 aa18.84■□□□□ 0.61
PACS1-201ENST00000320580 IFFO1Q0D2I5 559 aa18.84■□□□□ 0.61
PACS1-201ENST00000320580 PPFIA1Q13136 1202 aa18.84■□□□□ 0.61
PACS1-201ENST00000320580 E2F5Q15329 346 aa18.84■□□□□ 0.61
PACS1-201ENST00000320580 EP400NLQ6ZTU2 488 aa18.84■□□□□ 0.61
PACS1-201ENST00000320580 TBC1D8O95759 1140 aa18.84■□□□□ 0.61
PACS1-201ENST00000320580 TRMT44Q8IYL2 757 aaKnown RBP18.84■□□□□ 0.61
PACS1-201ENST00000320580 CCDC113Q9H0I3 377 aa18.84■□□□□ 0.61
PACS1-201ENST00000320580 CSB-PGBD3P0DP91 1061 aa18.84■□□□□ 0.61
PACS1-201ENST00000320580 DDX46Q7L014 1031 aaKnown RBP18.84■□□□□ 0.61
PACS1-201ENST00000320580 MICAL1Q8TDZ2 1067 aa18.84■□□□□ 0.61
PACS1-201ENST00000320580 PCDHA7Q9UN72 937 aa18.84■□□□□ 0.61
PACS1-201ENST00000320580 IQGAP3Q86VI3 1631 aa18.83■□□□□ 0.61
PACS1-201ENST00000320580 MAP2K1Q02750 393 aaPredicted RBP18.83■□□□□ 0.61
PACS1-201ENST00000320580 BIRC2Q13490 618 aa18.83■□□□□ 0.61
PACS1-201ENST00000320580 CCDC122Q5T0U0 273 aa18.83■□□□□ 0.61
PACS1-201ENST00000320580 ARMCX5Q6P1M9 558 aa18.83■□□□□ 0.61
PACS1-201ENST00000320580 FCHSD1Q86WN1 690 aa18.83■□□□□ 0.61
PACS1-201ENST00000320580 ABTB2Q8N961 1025 aa18.83■□□□□ 0.61
PACS1-201ENST00000320580 BAIAP2L1Q9UHR4 511 aa18.83■□□□□ 0.61
PACS1-201ENST00000320580 ATF3P18847 181 aa18.83■□□□□ 0.6
PACS1-201ENST00000320580 FBXW10Q5XX13 1052 aa18.83■□□□□ 0.6
PACS1-201ENST00000320580 CPLX4Q7Z7G2 160 aa18.83■□□□□ 0.6
PACS1-201ENST00000320580 CNGA4Q8IV77 575 aa18.83■□□□□ 0.6
PACS1-201ENST00000320580 LRRN4CLQ8ND94 238 aa18.83■□□□□ 0.6
PACS1-201ENST00000320580 INCENPQ9NQS7 918 aa18.83■□□□□ 0.6
PACS1-201ENST00000320580 KIF4AO95239 1232 aa18.83■□□□□ 0.6
PACS1-201ENST00000320580 ADALQ6DHV7 355 aa18.83■□□□□ 0.6
PACS1-201ENST00000320580 IFT81Q8WYA0 676 aa18.83■□□□□ 0.6
PACS1-201ENST00000320580 CTAGE1Q96RT6 745 aa18.83■□□□□ 0.6
PACS1-201ENST00000320580 STAP2Q9UGK3 403 aa18.83■□□□□ 0.6
PACS1-201ENST00000320580 ABCC3O15438 1527 aa18.82■□□□□ 0.6
PACS1-201ENST00000320580 GNAT3A8MTJ3 354 aa18.82■□□□□ 0.6
PACS1-201ENST00000320580 STX10O60499 249 aa18.82■□□□□ 0.6
PACS1-201ENST00000320580 BUB1BO60566 1050 aaPredicted RBP18.82■□□□□ 0.6
PACS1-201ENST00000320580 ZMYND10O75800 440 aa18.82■□□□□ 0.6
PACS1-201ENST00000320580 L2HGDHQ9H9P8 463 aa18.82■□□□□ 0.6
PACS1-201ENST00000320580 ZRANB1Q9UGI0 708 aa18.82■□□□□ 0.6
PACS1-201ENST00000320580 IQCB1Q15051 598 aa18.82■□□□□ 0.6
PACS1-201ENST00000320580 WHAMMP3Q1A5X7 153 aa18.82■□□□□ 0.6
PACS1-201ENST00000320580 NAA16Q6N069 864 aaPredicted RBP18.82■□□□□ 0.6
PACS1-201ENST00000320580 PACS2Q86VP3 889 aa18.82■□□□□ 0.6
PACS1-201ENST00000320580 TRPM2O94759 1503 aa18.82■□□□□ 0.6
PACS1-201ENST00000320580 NUP133Q8WUM0 1156 aa18.82■□□□□ 0.6
PACS1-201ENST00000320580 SLF1Q9BQI6 1058 aa18.82■□□□□ 0.6
PACS1-201ENST00000320580 KRT86O43790 486 aa18.81■□□□□ 0.6
PACS1-201ENST00000320580 DHX32Q7L7V1 743 aaKnown RBP18.81■□□□□ 0.6
PACS1-201ENST00000320580 VAV2P52735 878 aa18.81■□□□□ 0.6
PACS1-201ENST00000320580 TAF4BQ92750 862 aa18.81■□□□□ 0.6
PACS1-201ENST00000320580 CCT6AP40227 531 aaKnown RBP18.81■□□□□ 0.6
PACS1-201ENST00000320580 CORO7P57737 925 aa18.81■□□□□ 0.6
PACS1-201ENST00000320580 SLC35F6Q8N357 371 aa18.81■□□□□ 0.6
PACS1-201ENST00000320580 PSD3Q9NYI0 1048 aa18.81■□□□□ 0.6
PACS1-201ENST00000320580 UNC13BO14795 1591 aa18.81■□□□□ 0.6
PACS1-201ENST00000320580 PNOCQ13519 176 aa18.81■□□□□ 0.6
PACS1-201ENST00000320580 UBAC1Q9BSL1 405 aa18.81■□□□□ 0.6
PACS1-201ENST00000320580 ALG1Q9BT22 464 aa18.81■□□□□ 0.6
PACS1-201ENST00000320580 CCDC96Q2M329 555 aa18.8■□□□□ 0.6
PACS1-201ENST00000320580 ANO1Q5XXA6 986 aa18.8■□□□□ 0.6
PACS1-201ENST00000320580 PNMA8AQ86V59 439 aaPredicted RBP18.8■□□□□ 0.6
PACS1-201ENST00000320580 TTC14Q96N46 770 aa18.8■□□□□ 0.6
PACS1-201ENST00000320580 CEP89Q96ST8 783 aa18.8■□□□□ 0.6
PACS1-201ENST00000320580 ERVK-7P63135 1459 aa18.8■□□□□ 0.6
PACS1-201ENST00000320580 NAA15Q9BXJ9 866 aaKnown RBP18.8■□□□□ 0.6
PACS1-201ENST00000320580 PIK3R4Q99570 1358 aa18.8■□□□□ 0.6
PACS1-201ENST00000320580 ARFGAP2Q8N6H7 521 aa18.8■□□□□ 0.6
PACS1-201ENST00000320580 LUC7LQ9NQ29 371 aaKnown RBP18.8■□□□□ 0.6
PACS1-201ENST00000320580 SPATS2LQ9NUQ6 558 aaKnown RBP18.8■□□□□ 0.6
PACS1-201ENST00000320580 CHL1O00533 1208 aa18.79■□□□□ 0.6
PACS1-201ENST00000320580 ECM2O94769 699 aaPredicted RBP18.79■□□□□ 0.6
PACS1-201ENST00000320580 CCDC50Q8IVM0 306 aa18.79■□□□□ 0.6
PACS1-201ENST00000320580 WDR24Q96S15 920 aa18.79■□□□□ 0.6
PACS1-201ENST00000320580 CYLC1P35663 651 aaPredicted RBP18.79■□□□□ 0.6
PACS1-201ENST00000320580 ALS2CR12Q96Q35 445 aa18.79■□□□□ 0.6
PACS1-201ENST00000320580 A6NNZ2 444 aa18.79■□□□□ 0.6
PACS1-201ENST00000320580 FOXO3O43524 673 aa18.79■□□□□ 0.6
PACS1-201ENST00000320580 TUBB8Q3ZCM7 444 aa18.79■□□□□ 0.6
PACS1-201ENST00000320580 SMARCC2Q8TAQ2 1214 aa18.79■□□□□ 0.6
PACS1-201ENST00000320580 KIDINS220Q9ULH0 1771 aa18.79■□□□□ 0.6
PACS1-201ENST00000320580 E7EVH7 732 aa18.79■□□□□ 0.6
PACS1-201ENST00000320580 IDEP14735 1019 aa18.79■□□□□ 0.6
PACS1-201ENST00000320580 SF3A3Q12874 501 aaKnown RBP eCLIP18.79■□□□□ 0.62e-7■■■■■ 49.4
PACS1-201ENST00000320580 CCDC129Q6ZRS4 1044 aa18.79■□□□□ 0.6
PACS1-201ENST00000320580 BRAPQ7Z569 592 aa18.79■□□□□ 0.6
PACS1-201ENST00000320580 MICU3Q86XE3 530 aa18.79■□□□□ 0.6
PACS1-201ENST00000320580 LLPHQ9BRT6 129 aaKnown RBP18.79■□□□□ 0.6
PACS1-201ENST00000320580 CEP131Q9UPN4 1083 aa18.79■□□□□ 0.6
PACS1-201ENST00000320580 PFKFB1P16118 471 aa18.78■□□□□ 0.6
PACS1-201ENST00000320580 RCOR1Q9UKL0 485 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 185.9 ms