RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 SNX14Q9Y5W7 946 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 KIAA1551Q9HCM1 1747 aa8.36□□□□□ -1.07
PTCD2-201ENST00000308077 CNTNAP1P78357 1384 aa8.36□□□□□ -1.07
PTCD2-201ENST00000308077 ATP2B4P23634 1241 aa8.36□□□□□ -1.07
PTCD2-201ENST00000308077 ALDH1B1P30837 517 aa8.36□□□□□ -1.07
PTCD2-201ENST00000308077 LRRFIP1Q32MZ4 808 aaKnown RBP8.36□□□□□ -1.07
PTCD2-201ENST00000308077 SLC9C2Q5TAH2 1124 aa8.36□□□□□ -1.07
PTCD2-201ENST00000308077 VPS53Q5VIR6 699 aa8.36□□□□□ -1.07
PTCD2-201ENST00000308077 PRPF40BQ6NWY9 871 aaKnown RBP8.36□□□□□ -1.07
PTCD2-201ENST00000308077 TBC1D16Q8TBP0 767 aa8.36□□□□□ -1.07
PTCD2-201ENST00000308077 KCNB2Q92953 911 aa8.36□□□□□ -1.07
PTCD2-201ENST00000308077 ZNF622Q969S3 477 aaKnown RBP eCLIP8.36□□□□□ -1.07
PTCD2-201ENST00000308077 SNX21Q969T3 373 aa8.36□□□□□ -1.07
PTCD2-201ENST00000308077 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.36□□□□□ -1.07
PTCD2-201ENST00000308077 GGA1Q9UJY5 639 aa8.36□□□□□ -1.07
PTCD2-201ENST00000308077 DENND2AQ9ULE3 1009 aa8.36□□□□□ -1.07
PTCD2-201ENST00000308077 MAST2Q6P0Q8 1798 aa8.35□□□□□ -1.07
PTCD2-201ENST00000308077 PDS5AQ29RF7 1337 aaKnown RBP8.35□□□□□ -1.07
PTCD2-201ENST00000308077 ZNF532Q9HCE3 1301 aa8.35□□□□□ -1.07
PTCD2-201ENST00000308077 H0YIN7 160 aa8.35□□□□□ -1.07
PTCD2-201ENST00000308077 FOXP2O15409 715 aa8.35□□□□□ -1.07
PTCD2-201ENST00000308077 UBE3CQ15386 1083 aa8.35□□□□□ -1.07
PTCD2-201ENST00000308077 WASHC4Q2M389 1173 aa8.35□□□□□ -1.07
PTCD2-201ENST00000308077 STYK1Q6J9G0 422 aa8.35□□□□□ -1.07
PTCD2-201ENST00000308077 SLC27A2O14975 620 aa8.35□□□□□ -1.07
PTCD2-201ENST00000308077 SEMA3EO15041 775 aa8.35□□□□□ -1.07
PTCD2-201ENST00000308077 HSPD1P10809 573 aaKnown RBP8.35□□□□□ -1.07
PTCD2-201ENST00000308077 BECN1Q14457 450 aa8.35□□□□□ -1.07
PTCD2-201ENST00000308077 CREB3L3Q68CJ9 461 aa8.35□□□□□ -1.07
PTCD2-201ENST00000308077 ZSCAN25Q6NSZ9 544 aa8.35□□□□□ -1.07
PTCD2-201ENST00000308077 MAGEB6Q8N7X4 407 aa8.35□□□□□ -1.07
PTCD2-201ENST00000308077 CREBZFQ9NS37 354 aa8.35□□□□□ -1.07
PTCD2-201ENST00000308077 ARIH1Q9Y4X5 557 aaPredicted RBP8.35□□□□□ -1.07
PTCD2-201ENST00000308077 TAF6LQ9Y6J9 622 aa8.35□□□□□ -1.07
PTCD2-201ENST00000308077 CCDC88AQ3V6T2 1871 aa8.34□□□□□ -1.07
PTCD2-201ENST00000308077 GPAA1O43292 621 aa8.34□□□□□ -1.07
PTCD2-201ENST00000308077 MAP3K12Q12852 859 aa8.34□□□□□ -1.07
PTCD2-201ENST00000308077 ADCK5Q3MIX3 580 aa8.34□□□□□ -1.07
PTCD2-201ENST00000308077 TDRD7Q8NHU6 1098 aaKnown RBP8.34□□□□□ -1.07
PTCD2-201ENST00000308077 ZNF384Q8TF68 577 aa8.34□□□□□ -1.07
PTCD2-201ENST00000308077 DSCC1Q9BVC3 393 aa8.34□□□□□ -1.07
PTCD2-201ENST00000308077 ABCF2Q9UG63 623 aa8.34□□□□□ -1.07
PTCD2-201ENST00000308077 JAG2Q9Y219 1238 aa8.34□□□□□ -1.07
PTCD2-201ENST00000308077 SNED1Q8TER0 1413 aa8.34□□□□□ -1.07
PTCD2-201ENST00000308077 LAMA4Q16363 1823 aa8.34□□□□□ -1.07
PTCD2-201ENST00000308077 A0A0G2JLW4 131 aa8.34□□□□□ -1.08
PTCD2-201ENST00000308077 FRAT2O75474 233 aaPredicted RBP8.34□□□□□ -1.08
PTCD2-201ENST00000308077 POLD1P28340 1107 aa8.34□□□□□ -1.08
PTCD2-201ENST00000308077 CHAF1AQ13111 956 aaPredicted RBP8.34□□□□□ -1.08
PTCD2-201ENST00000308077 COL9A3Q14050 684 aaPredicted RBP8.34□□□□□ -1.08
PTCD2-201ENST00000308077 ZNF804AQ7Z570 1209 aa8.34□□□□□ -1.08
PTCD2-201ENST00000308077 ADGRA1Q86SQ6 560 aa8.34□□□□□ -1.08
PTCD2-201ENST00000308077 HSCBQ8IWL3 235 aa8.34□□□□□ -1.08
PTCD2-201ENST00000308077 LRP2BPQ9P2M1 347 aa8.34□□□□□ -1.08
PTCD2-201ENST00000308077 C6orf229H3BNL8 230 aa8.33□□□□□ -1.08
PTCD2-201ENST00000308077 C7orf43Q8WVR3 580 aa8.33□□□□□ -1.08
PTCD2-201ENST00000308077 UPF3BQ9BZI7 483 aaKnown RBP8.33□□□□□ -1.08
PTCD2-201ENST00000308077 CD209Q9NNX6 404 aa8.33□□□□□ -1.08
PTCD2-201ENST00000308077 U3KPZ7 1027 aaPredicted RBP8.33□□□□□ -1.08
PTCD2-201ENST00000308077 RPAP1Q9BWH6 1393 aaPredicted RBP8.33□□□□□ -1.08
PTCD2-201ENST00000308077 CYP21A2P08686 494 aa8.32□□□□□ -1.08
PTCD2-201ENST00000308077 IL1R1P14778 569 aa8.32□□□□□ -1.08
PTCD2-201ENST00000308077 CPA1P15085 419 aa8.32□□□□□ -1.08
PTCD2-201ENST00000308077 KCNA3P22001 575 aa8.32□□□□□ -1.08
PTCD2-201ENST00000308077 PRDX5P30044 214 aa8.32□□□□□ -1.08
PTCD2-201ENST00000308077 NEK4P51957 841 aa8.32□□□□□ -1.08
PTCD2-201ENST00000308077 DPP8Q6V1X1 898 aaPredicted RBP8.32□□□□□ -1.08
PTCD2-201ENST00000308077 CNKSR1Q969H4 720 aa8.32□□□□□ -1.08
PTCD2-201ENST00000308077 RAI14Q9P0K7 980 aa8.32□□□□□ -1.08
PTCD2-201ENST00000308077 ZNF219Q9P2Y4 722 aaPredicted RBP8.32□□□□□ -1.08
PTCD2-201ENST00000308077 BRCA1P38398 1863 aaKnown RBP8.32□□□□□ -1.08
PTCD2-201ENST00000308077 ZNF646O15015 1829 aaPredicted RBP8.32□□□□□ -1.08
PTCD2-201ENST00000308077 SALL1Q9NSC2 1324 aa8.32□□□□□ -1.08
PTCD2-201ENST00000308077 K7ELQ4 463 aaPredicted RBP8.32□□□□□ -1.08
PTCD2-201ENST00000308077 RIMBP2O15034 1052 aa8.32□□□□□ -1.08
PTCD2-201ENST00000308077 MBD4O95243 580 aa8.32□□□□□ -1.08
PTCD2-201ENST00000308077 GRIK5Q16478 980 aa8.32□□□□□ -1.08
PTCD2-201ENST00000308077 TSGA10IPQ3SY00 556 aa8.32□□□□□ -1.08
PTCD2-201ENST00000308077 TTLL5Q6EMB2 1281 aa8.32□□□□□ -1.08
PTCD2-201ENST00000308077 NSUN4Q96CB9 384 aaKnown RBP8.32□□□□□ -1.08
PTCD2-201ENST00000308077 JAKMIP1Q96N16 626 aaKnown RBP8.32□□□□□ -1.08
PTCD2-201ENST00000308077 TTC14Q96N46 770 aa8.32□□□□□ -1.08
PTCD2-201ENST00000308077 STRBPQ96SI9 672 aaKnown RBP8.32□□□□□ -1.08
PTCD2-201ENST00000308077 DAXXQ9UER7 740 aaPredicted RBP8.32□□□□□ -1.08
PTCD2-201ENST00000308077 ST18O60284 1047 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 DPEP1P16444 411 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 ZKSCAN1P17029 563 aaPredicted RBP8.31□□□□□ -1.08
PTCD2-201ENST00000308077 CASTP20810 708 aaKnown RBP8.31□□□□□ -1.08
PTCD2-201ENST00000308077 CYP7A1P22680 504 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 MECOMQ03112 1051 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 STOX1Q6ZVD7 989 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 ERICH6Q7L0X2 663 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 LCORLQ8N3X6 602 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 MIGA1Q8NAN2 632 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 SPRYD3Q8NCJ5 442 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 TM6SF1Q9BZW5 370 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 ARMT1Q9H993 441 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 RNF216Q9NWF9 866 aaPredicted RBP8.31□□□□□ -1.08
PTCD2-201ENST00000308077 FGAP02671 866 aa8.31□□□□□ -1.08
PTCD2-201ENST00000308077 SOX10P56693 466 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms