RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 SMARCC1Q92922 1105 aaPredicted RBP15.17■□□□□ 0.02
DDX54-201ENST00000306014 KIAA1468Q9P260 1216 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 IMPACTQ9P2X3 320 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 GPAA1O43292 621 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 POLA2Q14181 598 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 TMEM87AQ8NBN3 555 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 SLC52A2Q9HAB3 445 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 DBNLQ9UJU6 430 aaKnown RBP15.17■□□□□ 0.02
DDX54-201ENST00000306014 NLRP12P59046 1061 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 ENOX2Q16206 610 aaKnown RBP15.17■□□□□ 0.02
DDX54-201ENST00000306014 ADALQ6DHV7 355 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 TDRD7Q8NHU6 1098 aaKnown RBP15.17■□□□□ 0.02
DDX54-201ENST00000306014 CYP21A2P08686 494 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 USP5P45974 858 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 NECTIN1Q15223 517 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 TXLNBQ8N3L3 684 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 XAGE2Q96GT9 111 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 CTAGE1Q96RT6 745 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 MYL10Q9BUA6 226 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 TEX13AQ9BXU3 409 aaPredicted RBP15.17■□□□□ 0.02
DDX54-201ENST00000306014 ANGEL1Q9UNK9 670 aaKnown RBP15.17■□□□□ 0.02
DDX54-201ENST00000306014 USP6P35125 1406 aa15.17■□□□□ 0.02
DDX54-201ENST00000306014 PFKFB2O60825 505 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 ERCC6LQ2NKX8 1250 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 ZNF569Q5MCW4 686 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 MRFAP1L1Q96HT8 127 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 JADE2Q9NQC1 790 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 A1BGP04217 495 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 CYP7A1P22680 504 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 MYSM1Q5VVJ2 828 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 CACNA2D4Q7Z3S7 1137 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 TMTC2Q8N394 836 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 MIGA1Q8NAN2 632 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 APPBP2Q92624 585 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 BMP2KQ9NSY1 1161 aaPredicted RBP15.16■□□□□ 0.02
DDX54-201ENST00000306014 PHACTR2O75167 634 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 MATR3P43243 847 aaKnown RBP eCLIP15.16■□□□□ 0.02
DDX54-201ENST00000306014 ESR2Q92731 530 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 TRIM47Q96LD4 638 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 PCDHA7Q9UN72 937 aa15.16■□□□□ 0.02
DDX54-201ENST00000306014 GABPB1Q06547 395 aaPredicted RBP15.15■□□□□ 0.02
DDX54-201ENST00000306014 MAGEB6Q8N7X4 407 aa15.15■□□□□ 0.02
DDX54-201ENST00000306014 DSCC1Q9BVC3 393 aa15.15■□□□□ 0.02
DDX54-201ENST00000306014 KIDINS220Q9ULH0 1771 aa15.15■□□□□ 0.02
DDX54-201ENST00000306014 CTAGE9A4FU28 777 aa15.15■□□□□ 0.02
DDX54-201ENST00000306014 TSPY2A6NKD2 308 aa15.15■□□□□ 0.02
DDX54-201ENST00000306014 RHOXF2BP0C7M4 288 aa15.15■□□□□ 0.02
DDX54-201ENST00000306014 MCM3P25205 808 aa15.15■□□□□ 0.02
DDX54-201ENST00000306014 C11orf57Q6ZUT1 292 aaPredicted RBP15.15■□□□□ 0.02
DDX54-201ENST00000306014 RHOXF2Q9BQY4 288 aa15.15■□□□□ 0.02
DDX54-201ENST00000306014 TRIM21P19474 475 aaKnown RBP15.15■□□□□ 0.02
DDX54-201ENST00000306014 KRT40Q6A162 431 aa15.15■□□□□ 0.02
DDX54-201ENST00000306014 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.15■□□□□ 0.026e-7■■■■□ 19.3
DDX54-201ENST00000306014 ADGRB3O60242 1522 aa15.15■□□□□ 0.02
DDX54-201ENST00000306014 IQGAP1P46940 1657 aa15.15■□□□□ 0.02
DDX54-201ENST00000306014 USO1O60763 962 aaKnown RBP15.15■□□□□ 0.02
DDX54-201ENST00000306014 HSPD1P10809 573 aaKnown RBP15.15■□□□□ 0.02
DDX54-201ENST00000306014 CT47A1Q5JQC4 288 aaPredicted RBP15.15■□□□□ 0.02
DDX54-201ENST00000306014 IFIT1BQ5T764 474 aaKnown RBP15.15■□□□□ 0.02
DDX54-201ENST00000306014 CTR9Q6PD62 1173 aa15.15■□□□□ 0.02
DDX54-201ENST00000306014 C8orf37Q96NL8 207 aa15.15■□□□□ 0.02
DDX54-201ENST00000306014 CABP5Q9NP86 173 aa15.15■□□□□ 0.02
DDX54-201ENST00000306014 LMTK2Q8IWU2 1503 aa15.14■□□□□ 0.01
DDX54-201ENST00000306014 POLR2DO15514 142 aaKnown RBP15.14■□□□□ 0.01
DDX54-201ENST00000306014 TDRD12Q587J7 1177 aaKnown RBP15.14■□□□□ 0.01
DDX54-201ENST00000306014 ODF2Q5BJF6 829 aa15.14■□□□□ 0.01
DDX54-201ENST00000306014 NCOA3Q9Y6Q9 1424 aa15.14■□□□□ 0.01
DDX54-201ENST00000306014 SETBP1Q9Y6X0 1596 aa15.14■□□□□ 0.01
DDX54-201ENST00000306014 RDXP35241 583 aaKnown RBP15.14■□□□□ 0.01
DDX54-201ENST00000306014 PPP2R3AQ06190 1150 aa15.14■□□□□ 0.01
DDX54-201ENST00000306014 CCDC43Q96MW1 224 aaKnown RBP15.14■□□□□ 0.01
DDX54-201ENST00000306014 TCEAL9Q9UHQ7 104 aa15.14■□□□□ 0.01
DDX54-201ENST00000306014 NFE2L3Q9Y4A8 694 aa15.14■□□□□ 0.01
DDX54-201ENST00000306014 SASH1O94885 1247 aa15.14■□□□□ 0.01
DDX54-201ENST00000306014 PAFAH1B1P43034 410 aa15.14■□□□□ 0.01
DDX54-201ENST00000306014 NDUFA8P51970 172 aa15.14■□□□□ 0.01
DDX54-201ENST00000306014 CEP112Q8N8E3 955 aa15.14■□□□□ 0.01
DDX54-201ENST00000306014 IDEP14735 1019 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 PFKFB1P16118 471 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 DZIP1Q86YF9 867 aaKnown RBP15.13■□□□□ 0.01
DDX54-201ENST00000306014 TTC14Q96N46 770 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 HAUS7Q99871 368 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 CEP152O94986 1710 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 CAPN2P17655 700 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 ZAP70P43403 619 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 SPAG1Q07617 926 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 SF3B2Q13435 895 aaKnown RBP15.13■□□□□ 0.01
DDX54-201ENST00000306014 DIS3L2Q8IYB7 885 aaKnown RBP15.13■□□□□ 0.01
DDX54-201ENST00000306014 ZNF274Q96GC6 653 aaPredicted RBP15.13■□□□□ 0.01
DDX54-201ENST00000306014 MBD4O95243 580 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 PNOCQ13519 176 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 TCP11L1Q9NUJ3 509 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 VPS18Q9P253 973 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 GUCA1BQ9UMX6 200 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 ADCY9O60503 1353 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 AKR1B15C9JRZ8 316 aaPredicted RBP15.13■□□□□ 0.01
DDX54-201ENST00000306014 MTX1Q13505 466 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 TAF4BQ92750 862 aa15.13■□□□□ 0.01
DDX54-201ENST00000306014 BMP15O95972 392 aa15.12■□□□□ 0.01
DDX54-201ENST00000306014 CCT6AP40227 531 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms